RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 HIST2H2BEQ16778 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BHQ93079 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BNQ99877 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BMQ99879 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 ORMDL1Q9P0S3 153 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
TRAPPC9-212ENST00000521944 hDV103S1A0JD37 113 aa3.34□□□□□ -1.87
TRAPPC9-212ENST00000521944 TMEM256-PLSCR3K7ERE1 68 aa3.34□□□□□ -1.87
TRAPPC9-212ENST00000521944 NDUFA5Q16718 116 aa3.33□□□□□ -1.88
TRAPPC9-212ENST00000521944 HIST1H4GQ99525 98 aa3.33□□□□□ -1.88
TRAPPC9-212ENST00000521944 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
TRAPPC9-212ENST00000521944 MT1EP04732 61 aa3.32□□□□□ -1.88
TRAPPC9-212ENST00000521944 CYSTM1Q9H1C7 97 aa3.32□□□□□ -1.88
TRAPPC9-212ENST00000521944 A0A0B4J2C4 111 aa3.31□□□□□ -1.88
TRAPPC9-212ENST00000521944 H0YAA0 97 aa3.3□□□□□ -1.88
TRAPPC9-212ENST00000521944 H3BQ85 93 aa3.3□□□□□ -1.88
TRAPPC9-212ENST00000521944 PDE6GP18545 87 aa3.3□□□□□ -1.88
TRAPPC9-212ENST00000521944 CEND1Q8N111 149 aa3.28□□□□□ -1.88
TRAPPC9-212ENST00000521944 DNAL4O96015 105 aa3.27□□□□□ -1.89
TRAPPC9-212ENST00000521944 C9JAW5 83 aa3.26□□□□□ -1.89
TRAPPC9-212ENST00000521944 COA6Q5JTJ3 125 aaKnown RBP3.26□□□□□ -1.89
TRAPPC9-212ENST00000521944 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
TRAPPC9-212ENST00000521944 PRO1854Q9UHT4 67 aa3.25□□□□□ -1.89
TRAPPC9-212ENST00000521944 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
TRAPPC9-212ENST00000521944 HCG22E2RYF7 251 aa3.23□□□□□ -1.89
TRAPPC9-212ENST00000521944 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
TRAPPC9-212ENST00000521944 PRO0461Q9UI25 63 aa3.23□□□□□ -1.89
TRAPPC9-212ENST00000521944 MT1GP13640 62 aa3.22□□□□□ -1.89
TRAPPC9-212ENST00000521944 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
TRAPPC9-212ENST00000521944 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
TRAPPC9-212ENST00000521944 COX8AP10176 69 aa3.2□□□□□ -1.9
TRAPPC9-212ENST00000521944 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
TRAPPC9-212ENST00000521944 A0A1B0GW54 56 aa3.19□□□□□ -1.9
TRAPPC9-212ENST00000521944 CXCL6P80162 114 aa3.19□□□□□ -1.9
TRAPPC9-212ENST00000521944 MT1MQ8N339 61 aa3.19□□□□□ -1.9
TRAPPC9-212ENST00000521944 HSBP1L1C9JCN9 74 aa3.18□□□□□ -1.9
TRAPPC9-212ENST00000521944 DLEU1O43261 78 aa3.18□□□□□ -1.9
TRAPPC9-212ENST00000521944 NREPQ16612 68 aa3.18□□□□□ -1.9
TRAPPC9-212ENST00000521944 HIST3H2BBQ8N257 126 aa3.18□□□□□ -1.9
TRAPPC9-212ENST00000521944 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC9-212ENST00000521944 LOC110117498A0A087WWA1 95 aa3.17□□□□□ -1.9
TRAPPC9-212ENST00000521944 P0C880 135 aa3.17□□□□□ -1.9
TRAPPC9-212ENST00000521944 FXYD2P54710 66 aa3.17□□□□□ -1.9
TRAPPC9-212ENST00000521944 R4GN34 69 aa3.17□□□□□ -1.9
TRAPPC9-212ENST00000521944 CASC2Q6XLA1 102 aa3.16□□□□□ -1.9
TRAPPC9-212ENST00000521944 HIGD1BQ9P298 99 aa3.16□□□□□ -1.9
TRAPPC9-212ENST00000521944 BAALC-AS2P0C853 105 aa3.15□□□□□ -1.91
TRAPPC9-212ENST00000521944 M0QZ58 72 aa3.14□□□□□ -1.91
TRAPPC9-212ENST00000521944 PSMB2P49721 201 aa3.14□□□□□ -1.91
TRAPPC9-212ENST00000521944 LINC01554Q52M75 96 aa3.14□□□□□ -1.91
TRAPPC9-212ENST00000521944 Q8N9L7 120 aa3.14□□□□□ -1.91
TRAPPC9-212ENST00000521944 C14orf144Q96I85 54 aa3.14□□□□□ -1.91
TRAPPC9-212ENST00000521944 K7ERJ3 54 aa3.13□□□□□ -1.91
TRAPPC9-212ENST00000521944 NDUFC1O43677 76 aa3.13□□□□□ -1.91
TRAPPC9-212ENST00000521944 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
TRAPPC9-212ENST00000521944 COX6CP09669 75 aa3.1□□□□□ -1.91
TRAPPC9-212ENST00000521944 HIST1H2BLQ99880 126 aa3.1□□□□□ -1.91
TRAPPC9-212ENST00000521944 C14orf132Q9NPU4 83 aa3.1□□□□□ -1.91
TRAPPC9-212ENST00000521944 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
TRAPPC9-212ENST00000521944 BPY2O14599 106 aa3.08□□□□□ -1.92
TRAPPC9-212ENST00000521944 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
TRAPPC9-212ENST00000521944 MT1LQ93083 61 aa3.08□□□□□ -1.92
TRAPPC9-212ENST00000521944 CYP4F30PQ9H0H9 118 aa3.08□□□□□ -1.92
TRAPPC9-212ENST00000521944 JMJD7-PLA2G4BH0Y9G9 81 aa3.07□□□□□ -1.92
TRAPPC9-212ENST00000521944 K7EP34 96 aa3.06□□□□□ -1.92
TRAPPC9-212ENST00000521944 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
TRAPPC9-212ENST00000521944 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
TRAPPC9-212ENST00000521944 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC9-212ENST00000521944 SCGB1C2P0DMR2 95 aa3.01□□□□□ -1.93
TRAPPC9-212ENST00000521944 SPATA45Q537H7 98 aa2.99□□□□□ -1.93
TRAPPC9-212ENST00000521944 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
TRAPPC9-212ENST00000521944 C20orf197Q8N268 126 aa2.98□□□□□ -1.93
TRAPPC9-212ENST00000521944 S100A2P29034 98 aa2.97□□□□□ -1.93
TRAPPC9-212ENST00000521944 TP53AIP1Q9HCN2 124 aa2.95□□□□□ -1.94
TRAPPC9-212ENST00000521944 HSD52Q0P140 79 aa2.94□□□□□ -1.94
TRAPPC9-212ENST00000521944 ATXN8Q156A1 80 aa2.94□□□□□ -1.94
TRAPPC9-212ENST00000521944 BATFQ16520 125 aa2.94□□□□□ -1.94
TRAPPC9-212ENST00000521944 A0A1W2PPM0 123 aa2.92□□□□□ -1.94
TRAPPC9-212ENST00000521944 A0A0D9SG42 100 aa2.91□□□□□ -1.94
TRAPPC9-212ENST00000521944 ACYP1P07311 99 aa2.91□□□□□ -1.94
TRAPPC9-212ENST00000521944 NAA38Q9BRA0 125 aaKnown RBP2.91□□□□□ -1.94
TRAPPC9-212ENST00000521944 VAMP8Q9BV40 100 aa2.91□□□□□ -1.94
TRAPPC9-212ENST00000521944 TRAV22A0A0B4J277 110 aa2.89□□□□□ -1.95
TRAPPC9-212ENST00000521944 LOC101927531A0A1B0GV80 90 aa2.88□□□□□ -1.95
TRAPPC9-212ENST00000521944 MT-ATP8P03928 68 aa2.88□□□□□ -1.95
TRAPPC9-212ENST00000521944 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
TRAPPC9-212ENST00000521944 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
TRAPPC9-212ENST00000521944 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
TRAPPC9-212ENST00000521944 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
TRAPPC9-212ENST00000521944 S100A6P06703 90 aa2.78□□□□□ -1.96
TRAPPC9-212ENST00000521944 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
TRAPPC9-212ENST00000521944 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
TRAPPC9-212ENST00000521944 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
TRAPPC9-212ENST00000521944 SPCS1Q9Y6A9 102 aa2.76□□□□□ -1.97
TRAPPC9-212ENST00000521944 S100A1P23297 94 aa2.74□□□□□ -1.97
TRAPPC9-212ENST00000521944 H3BT86 120 aa2.73□□□□□ -1.97
TRAPPC9-212ENST00000521944 UBL5Q9BZL1 73 aa2.73□□□□□ -1.97
TRAPPC9-212ENST00000521944 H0Y9P7 68 aa2.72□□□□□ -1.97
TRAPPC9-212ENST00000521944 TSTD3H0UI37 97 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms