RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
NEK1-207ENST00000511633 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
NEK1-207ENST00000511633 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
NEK1-207ENST00000511633 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
NEK1-207ENST00000511633 DNAH1Q9P2D7 4330 aa3.92□□□□□ -1.78
NEK1-207ENST00000511633 PLECQ15149 4684 aaKnown RBP3.9□□□□□ -1.79
NEK1-207ENST00000511633 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
NEK1-207ENST00000511633 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
NEK1-207ENST00000511633 CMYA5Q8N3K9 4069 aa3.84□□□□□ -1.8
NEK1-207ENST00000511633 DNHD1Q96M86 4753 aa3.84□□□□□ -1.8
NEK1-207ENST00000511633 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
NEK1-207ENST00000511633 DNAH11Q96DT5 4516 aa3.83□□□□□ -1.8
NEK1-207ENST00000511633 DNAH10Q8IVF4 4471 aa3.81□□□□□ -1.8
NEK1-207ENST00000511633 VPS13DQ5THJ4 4388 aa3.8□□□□□ -1.8
NEK1-207ENST00000511633 ANK2Q01484 3957 aa3.79□□□□□ -1.8
NEK1-207ENST00000511633 DNAH17Q9UFH2 4485 aa3.78□□□□□ -1.8
NEK1-207ENST00000511633 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
NEK1-207ENST00000511633 MT1HP80294 61 aa3.76□□□□□ -1.81
NEK1-207ENST00000511633 DYNC1H1Q14204 4646 aaKnown RBP3.76□□□□□ -1.81
NEK1-207ENST00000511633 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
NEK1-207ENST00000511633 LRP1BQ9NZR2 4599 aa3.74□□□□□ -1.81
NEK1-207ENST00000511633 KRTAP8-1Q8IUC2 63 aa3.74□□□□□ -1.81
NEK1-207ENST00000511633 DNAH2Q9P225 4427 aa3.73□□□□□ -1.81
NEK1-207ENST00000511633 DNAH3Q8TD57 4116 aa3.72□□□□□ -1.81
NEK1-207ENST00000511633 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
NEK1-207ENST00000511633 INE1O15225 51 aa3.69□□□□□ -1.82
NEK1-207ENST00000511633 FAT1Q14517 4588 aa3.69□□□□□ -1.82
NEK1-207ENST00000511633 MT2AP02795 61 aa3.69□□□□□ -1.82
NEK1-207ENST00000511633 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
NEK1-207ENST00000511633 RYR1P21817 5038 aa3.67□□□□□ -1.82
NEK1-207ENST00000511633 PRKDCP78527 4128 aaKnown RBP3.66□□□□□ -1.82
NEK1-207ENST00000511633 LYSTQ99698 3801 aa3.66□□□□□ -1.82
NEK1-207ENST00000511633 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
NEK1-207ENST00000511633 KMT2AQ03164 3969 aa3.63□□□□□ -1.83
NEK1-207ENST00000511633 DNAH8Q96JB1 4490 aa3.63□□□□□ -1.83
NEK1-207ENST00000511633 MT1FP04733 61 aa3.62□□□□□ -1.83
NEK1-207ENST00000511633 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
NEK1-207ENST00000511633 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
NEK1-207ENST00000511633 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
NEK1-207ENST00000511633 DNAH7Q8WXX0 4024 aa3.56□□□□□ -1.84
NEK1-207ENST00000511633 APOBP04114 4563 aaKnown RBP3.55□□□□□ -1.84
NEK1-207ENST00000511633 RYR3Q15413 4870 aa3.53□□□□□ -1.84
NEK1-207ENST00000511633 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
NEK1-207ENST00000511633 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
NEK1-207ENST00000511633 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
NEK1-207ENST00000511633 FRAS1Q86XX4 4008 aa3.47□□□□□ -1.85
NEK1-207ENST00000511633 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
NEK1-207ENST00000511633 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
NEK1-207ENST00000511633 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
NEK1-207ENST00000511633 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
NEK1-207ENST00000511633 HECTD4Q9Y4D8 3996 aa3.41□□□□□ -1.86
NEK1-207ENST00000511633 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
NEK1-207ENST00000511633 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
NEK1-207ENST00000511633 LRP1Q07954 4544 aaKnown RBP3.39□□□□□ -1.87
NEK1-207ENST00000511633 RYR2Q92736 4967 aa3.39□□□□□ -1.87
NEK1-207ENST00000511633 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
NEK1-207ENST00000511633 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
NEK1-207ENST00000511633 HSPG2P98160 4391 aa3.31□□□□□ -1.88
NEK1-207ENST00000511633 MT1XP80297 61 aa3.3□□□□□ -1.88
NEK1-207ENST00000511633 SPRR2EP22531 72 aa3.3□□□□□ -1.88
NEK1-207ENST00000511633 SPRR2BP35325 72 aa3.3□□□□□ -1.88
NEK1-207ENST00000511633 SPRR2AP35326 72 aa3.3□□□□□ -1.88
NEK1-207ENST00000511633 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
NEK1-207ENST00000511633 HERC2O95714 4834 aa3.28□□□□□ -1.88
NEK1-207ENST00000511633 MT1BP07438 61 aa3.28□□□□□ -1.88
NEK1-207ENST00000511633 BIRC6Q9NR09 4857 aa3.27□□□□□ -1.89
NEK1-207ENST00000511633 PKHD1P08F94 4074 aa3.26□□□□□ -1.89
NEK1-207ENST00000511633 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
NEK1-207ENST00000511633 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
NEK1-207ENST00000511633 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
NEK1-207ENST00000511633 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
NEK1-207ENST00000511633 PKD1P98161 4303 aa3.25□□□□□ -1.89
NEK1-207ENST00000511633 LCE2BO14633 110 aa3.24□□□□□ -1.89
NEK1-207ENST00000511633 HERC1Q15751 4861 aa3.23□□□□□ -1.89
NEK1-207ENST00000511633 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
NEK1-207ENST00000511633 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.89
NEK1-207ENST00000511633 KRTAP4-8A0A0G2JLE6 195 aa3.21□□□□□ -1.9
NEK1-207ENST00000511633 KRTAP4-8Q9BYQ9 185 aa3.21□□□□□ -1.9
NEK1-207ENST00000511633 LPAP08519 4548 aa3.21□□□□□ -1.9
NEK1-207ENST00000511633 LRP2P98164 4655 aa3.21□□□□□ -1.9
NEK1-207ENST00000511633 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
NEK1-207ENST00000511633 PKHD1L1Q86WI1 4243 aa3.19□□□□□ -1.9
NEK1-207ENST00000511633 MT1GP13640 62 aa3.19□□□□□ -1.9
NEK1-207ENST00000511633 SPRR2DP22532 72 aa3.19□□□□□ -1.9
NEK1-207ENST00000511633 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
NEK1-207ENST00000511633 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
NEK1-207ENST00000511633 TNXBP22105 4242 aa3.11□□□□□ -1.91
NEK1-207ENST00000511633 LCE2AQ5TA79 106 aaPredicted RBP3.1□□□□□ -1.91
NEK1-207ENST00000511633 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.92
NEK1-207ENST00000511633 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
NEK1-207ENST00000511633 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
NEK1-207ENST00000511633 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
NEK1-207ENST00000511633 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
NEK1-207ENST00000511633 MT1LQ93083 61 aa2.98□□□□□ -1.93
NEK1-207ENST00000511633 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
NEK1-207ENST00000511633 FLGP20930 4061 aaPredicted RBP2.98□□□□□ -1.93
NEK1-207ENST00000511633 ABCA13Q86UQ4 5058 aa2.98□□□□□ -1.93
NEK1-207ENST00000511633 MT1EP04732 61 aa2.97□□□□□ -1.93
NEK1-207ENST00000511633 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
NEK1-207ENST00000511633 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms