RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
CCDC149-206ENST00000508236 SRRM2Q9UQ35 2752 aaKnown RBP4.42□□□□□ -1.7
CCDC149-206ENST00000508236 CSMD3Q7Z407 3707 aa4.42□□□□□ -1.7
CCDC149-206ENST00000508236 P0C880 135 aa4.41□□□□□ -1.7
CCDC149-206ENST00000508236 DNAH7Q8WXX0 4024 aa4.4□□□□□ -1.7
CCDC149-206ENST00000508236 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.71
CCDC149-206ENST00000508236 STARD9Q9P2P6 4700 aa4.39□□□□□ -1.71
CCDC149-206ENST00000508236 SPINK1P00995 79 aa4.38□□□□□ -1.71
CCDC149-206ENST00000508236 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
CCDC149-206ENST00000508236 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
CCDC149-206ENST00000508236 LYSTQ99698 3801 aa4.36□□□□□ -1.71
CCDC149-206ENST00000508236 RPS29P62273 56 aaKnown RBP4.36□□□□□ -1.71
CCDC149-206ENST00000508236 LINC00304Q8N9R0 145 aa4.36□□□□□ -1.71
CCDC149-206ENST00000508236 DNAH2Q9P225 4427 aa4.35□□□□□ -1.71
CCDC149-206ENST00000508236 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
CCDC149-206ENST00000508236 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.72
CCDC149-206ENST00000508236 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
CCDC149-206ENST00000508236 MEGF8Q7Z7M0 2845 aa4.32□□□□□ -1.72
CCDC149-206ENST00000508236 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
CCDC149-206ENST00000508236 COX6B2Q6YFQ2 88 aa4.31□□□□□ -1.72
CCDC149-206ENST00000508236 TGP01266 2768 aa4.3□□□□□ -1.72
CCDC149-206ENST00000508236 A0A1B0GVY2 172 aa4.28□□□□□ -1.72
CCDC149-206ENST00000508236 KMT2AQ03164 3969 aa4.27□□□□□ -1.73
CCDC149-206ENST00000508236 A0A1B0GU33 70 aa4.25□□□□□ -1.73
CCDC149-206ENST00000508236 H0YAA0 97 aa4.25□□□□□ -1.73
CCDC149-206ENST00000508236 SMR3BP02814 79 aaPredicted RBP4.25□□□□□ -1.73
CCDC149-206ENST00000508236 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
CCDC149-206ENST00000508236 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
CCDC149-206ENST00000508236 DNAH11Q96DT5 4516 aa4.24□□□□□ -1.73
CCDC149-206ENST00000508236 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
CCDC149-206ENST00000508236 FRAS1Q86XX4 4008 aa4.22□□□□□ -1.73
CCDC149-206ENST00000508236 PKD1P98161 4303 aa4.22□□□□□ -1.73
CCDC149-206ENST00000508236 DNAH5Q8TE73 4624 aa4.21□□□□□ -1.74
CCDC149-206ENST00000508236 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
CCDC149-206ENST00000508236 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
CCDC149-206ENST00000508236 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
CCDC149-206ENST00000508236 SACSQ9NZJ4 4579 aa4.15□□□□□ -1.75
CCDC149-206ENST00000508236 LRP1BQ9NZR2 4599 aa4.14□□□□□ -1.75
CCDC149-206ENST00000508236 FAT2Q9NYQ8 4349 aa4.14□□□□□ -1.75
CCDC149-206ENST00000508236 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
CCDC149-206ENST00000508236 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
CCDC149-206ENST00000508236 HYDINQ4G0P3 5121 aa4.11□□□□□ -1.75
CCDC149-206ENST00000508236 DNHD1Q96M86 4753 aa4.11□□□□□ -1.75
CCDC149-206ENST00000508236 Q5VSD8 79 aa4.08□□□□□ -1.76
CCDC149-206ENST00000508236 VPS13BQ7Z7G8 4022 aa4.06□□□□□ -1.76
CCDC149-206ENST00000508236 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
CCDC149-206ENST00000508236 FLG2Q5D862 2391 aaPredicted RBP4.05□□□□□ -1.76
CCDC149-206ENST00000508236 DYNC1H1Q14204 4646 aaKnown RBP4.03□□□□□ -1.76
CCDC149-206ENST00000508236 PKHD1L1Q86WI1 4243 aa4.01□□□□□ -1.77
CCDC149-206ENST00000508236 APOBP04114 4563 aaKnown RBP3.98□□□□□ -1.77
CCDC149-206ENST00000508236 PKHD1P08F94 4074 aa3.97□□□□□ -1.77
CCDC149-206ENST00000508236 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
CCDC149-206ENST00000508236 R4GN34 69 aa3.95□□□□□ -1.78
CCDC149-206ENST00000508236 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
CCDC149-206ENST00000508236 S4R3F8 94 aa3.93□□□□□ -1.78
CCDC149-206ENST00000508236 RYR2Q92736 4967 aa3.91□□□□□ -1.78
CCDC149-206ENST00000508236 FAT1Q14517 4588 aa3.88□□□□□ -1.79
CCDC149-206ENST00000508236 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
CCDC149-206ENST00000508236 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
CCDC149-206ENST00000508236 PRO2289Q9P1D8 64 aa3.86□□□□□ -1.79
CCDC149-206ENST00000508236 TNXBP22105 4242 aa3.84□□□□□ -1.79
CCDC149-206ENST00000508236 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
CCDC149-206ENST00000508236 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.79
CCDC149-206ENST00000508236 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
CCDC149-206ENST00000508236 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.79
CCDC149-206ENST00000508236 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
CCDC149-206ENST00000508236 HSPG2P98160 4391 aa3.79□□□□□ -1.8
CCDC149-206ENST00000508236 M0QZ58 72 aa3.79□□□□□ -1.8
CCDC149-206ENST00000508236 KRTAP13-4Q3LI77 160 aa3.79□□□□□ -1.8
CCDC149-206ENST00000508236 INE1O15225 51 aa3.78□□□□□ -1.8
CCDC149-206ENST00000508236 A0A0D9SG42 100 aa3.77□□□□□ -1.81
CCDC149-206ENST00000508236 RYR1P21817 5038 aa3.77□□□□□ -1.81
CCDC149-206ENST00000508236 LRP1Q07954 4544 aaKnown RBP3.76□□□□□ -1.81
CCDC149-206ENST00000508236 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
CCDC149-206ENST00000508236 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
CCDC149-206ENST00000508236 KMT2CQ8NEZ4 4911 aaKnown RBP3.72□□□□□ -1.81
CCDC149-206ENST00000508236 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
CCDC149-206ENST00000508236 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
CCDC149-206ENST00000508236 MYCBP2O75592 4640 aa3.65□□□□□ -1.82
CCDC149-206ENST00000508236 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
CCDC149-206ENST00000508236 KRTAP4-1Q9BYQ7 146 aa3.63□□□□□ -1.83
CCDC149-206ENST00000508236 RYR3Q15413 4870 aa3.63□□□□□ -1.83
CCDC149-206ENST00000508236 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
CCDC149-206ENST00000508236 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
CCDC149-206ENST00000508236 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
CCDC149-206ENST00000508236 LRP2P98164 4655 aa3.54□□□□□ -1.84
CCDC149-206ENST00000508236 EPPK1P58107 5090 aaKnown RBP3.5□□□□□ -1.85
CCDC149-206ENST00000508236 LPAP08519 4548 aa3.49□□□□□ -1.85
CCDC149-206ENST00000508236 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
CCDC149-206ENST00000508236 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
CCDC149-206ENST00000508236 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
CCDC149-206ENST00000508236 ABCA13Q86UQ4 5058 aa3.41□□□□□ -1.86
CCDC149-206ENST00000508236 HERC2O95714 4834 aa3.37□□□□□ -1.87
CCDC149-206ENST00000508236 TNP1P09430 55 aa3.37□□□□□ -1.87
CCDC149-206ENST00000508236 BIRC6Q9NR09 4857 aa3.35□□□□□ -1.87
CCDC149-206ENST00000508236 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
CCDC149-206ENST00000508236 SPRR2GQ9BYE4 73 aa3.33□□□□□ -1.88
CCDC149-206ENST00000508236 KRTAP10-10P60014 251 aa3.32□□□□□ -1.88
CCDC149-206ENST00000508236 M0R2T5 61 aa3.31□□□□□ -1.88
CCDC149-206ENST00000508236 MT1HP80294 61 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms