RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 H0YAA0 97 aa2.73□□□□□ -1.97
VCAN-207ENST00000507162 ORMDL1Q9P0S3 153 aa2.73□□□□□ -1.97
VCAN-207ENST00000507162 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
VCAN-207ENST00000507162 MMP24-AS1A0A0U1RRL7 71 aa2.72□□□□□ -1.97
VCAN-207ENST00000507162 A0A1B0GX51 115 aa2.72□□□□□ -1.97
VCAN-207ENST00000507162 hDV103S1A0JD37 113 aa2.72□□□□□ -1.97
VCAN-207ENST00000507162 MT3P25713 68 aa2.72□□□□□ -1.97
VCAN-207ENST00000507162 KRTDAPP60985 99 aa2.72□□□□□ -1.97
VCAN-207ENST00000507162 Q6ZQT0 140 aa2.72□□□□□ -1.97
VCAN-207ENST00000507162 TMEM256-PLSCR3K7ERE1 68 aa2.7□□□□□ -1.98
VCAN-207ENST00000507162 DNAL4O96015 105 aa2.7□□□□□ -1.98
VCAN-207ENST00000507162 H3BQ85 93 aa2.69□□□□□ -1.98
VCAN-207ENST00000507162 ADM2Q7Z4H4 148 aa2.69□□□□□ -1.98
VCAN-207ENST00000507162 A0A087WVE0 104 aa2.68□□□□□ -1.98
VCAN-207ENST00000507162 SVBPQ8N300 66 aa2.68□□□□□ -1.98
VCAN-207ENST00000507162 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
VCAN-207ENST00000507162 BPY2O14599 106 aa2.67□□□□□ -1.98
VCAN-207ENST00000507162 MT1EP04732 61 aa2.67□□□□□ -1.98
VCAN-207ENST00000507162 NDUFA5Q16718 116 aa2.67□□□□□ -1.98
VCAN-207ENST00000507162 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
VCAN-207ENST00000507162 C9JAW5 83 aa2.66□□□□□ -1.98
VCAN-207ENST00000507162 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
VCAN-207ENST00000507162 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
VCAN-207ENST00000507162 R4GN34 69 aa2.65□□□□□ -1.99
VCAN-207ENST00000507162 HCG22E2RYF7 251 aa2.64□□□□□ -1.99
VCAN-207ENST00000507162 MT1GP13640 62 aa2.64□□□□□ -1.99
VCAN-207ENST00000507162 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
VCAN-207ENST00000507162 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
VCAN-207ENST00000507162 M0QZ58 72 aa2.62□□□□□ -1.99
VCAN-207ENST00000507162 NREPQ16612 68 aa2.62□□□□□ -1.99
VCAN-207ENST00000507162 A0A0B4J2C4 111 aa2.61□□□□□ -1.99
VCAN-207ENST00000507162 NDUFC1O43677 76 aa2.61□□□□□ -1.99
VCAN-207ENST00000507162 SCGB1C2P0DMR2 95 aa2.6□□□□□ -1.99
VCAN-207ENST00000507162 ANAPC13Q9BS18 74 aa2.6□□□□□ -1.99
VCAN-207ENST00000507162 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
VCAN-207ENST00000507162 PRO1854Q9UHT4 67 aa2.59□□□□□ -1.99
VCAN-207ENST00000507162 HIST1H2BKO60814 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST1H2BJP06899 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST1H2BOP23527 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST1H2BBP33778 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST1H2BDP58876 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST1H2BCP62807 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST2H2BEQ16778 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 LUZP6Q538Z0 58 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.58□□□□□ -2
VCAN-207ENST00000507162 CASC2Q6XLA1 102 aa2.58□□□□□ -2
VCAN-207ENST00000507162 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
VCAN-207ENST00000507162 MT1MQ8N339 61 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST1H2BHQ93079 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST1H2BNQ99877 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 HIST1H2BMQ99879 126 aa2.58□□□□□ -2
VCAN-207ENST00000507162 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
VCAN-207ENST00000507162 MP68P56378 58 aa2.57□□□□□ -2
VCAN-207ENST00000507162 P0C880 135 aa2.55□□□□□ -2
VCAN-207ENST00000507162 A0A1B0GW54 56 aa2.54□□□□□ -2
VCAN-207ENST00000507162 COX6CP09669 75 aa2.54□□□□□ -2
VCAN-207ENST00000507162 BAALC-AS2P0C853 105 aa2.54□□□□□ -2
VCAN-207ENST00000507162 BATFQ16520 125 aa2.53□□□□□ -2
VCAN-207ENST00000507162 LCE1FQ5T754 118 aa2.53□□□□□ -2
VCAN-207ENST00000507162 HIST3H2BBQ8N257 126 aa2.52□□□□□ -2.01
VCAN-207ENST00000507162 Q8N9L7 120 aa2.52□□□□□ -2.01
VCAN-207ENST00000507162 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
VCAN-207ENST00000507162 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
VCAN-207ENST00000507162 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
VCAN-207ENST00000507162 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
VCAN-207ENST00000507162 C20orf197Q8N268 126 aa2.51□□□□□ -2.01
VCAN-207ENST00000507162 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
VCAN-207ENST00000507162 K7EP34 96 aa2.5□□□□□ -2.01
VCAN-207ENST00000507162 COX8AP10176 69 aa2.5□□□□□ -2.01
VCAN-207ENST00000507162 LOC110117498A0A087WWA1 95 aa2.49□□□□□ -2.01
VCAN-207ENST00000507162 S100A2P29034 98 aa2.49□□□□□ -2.01
VCAN-207ENST00000507162 JMJD7-PLA2G4BH0Y9G9 81 aa2.48□□□□□ -2.01
VCAN-207ENST00000507162 MT-ATP8P03928 68 aa2.48□□□□□ -2.01
VCAN-207ENST00000507162 C14orf144Q96I85 54 aa2.48□□□□□ -2.01
VCAN-207ENST00000507162 C14orf132Q9NPU4 83 aa2.48□□□□□ -2.01
VCAN-207ENST00000507162 K7ERS5 55 aa2.47□□□□□ -2.01
VCAN-207ENST00000507162 FXYD2P54710 66 aa2.47□□□□□ -2.01
VCAN-207ENST00000507162 MT1LQ93083 61 aa2.47□□□□□ -2.01
VCAN-207ENST00000507162 HIST1H2BLQ99880 126 aa2.47□□□□□ -2.01
VCAN-207ENST00000507162 CYP4F30PQ9H0H9 118 aa2.47□□□□□ -2.01
VCAN-207ENST00000507162 K7ERJ3 54 aa2.46□□□□□ -2.02
VCAN-207ENST00000507162 DLEU1O43261 78 aa2.46□□□□□ -2.02
VCAN-207ENST00000507162 PMAIP1Q13794 54 aa2.46□□□□□ -2.02
VCAN-207ENST00000507162 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
VCAN-207ENST00000507162 A0A1W2PPM0 123 aa2.45□□□□□ -2.02
VCAN-207ENST00000507162 HIGD1BQ9P298 99 aa2.45□□□□□ -2.02
VCAN-207ENST00000507162 NAA38Q9BRA0 125 aaKnown RBP2.44□□□□□ -2.02
VCAN-207ENST00000507162 ACYP1P07311 99 aa2.43□□□□□ -2.02
VCAN-207ENST00000507162 A0A0D9SG42 100 aa2.4□□□□□ -2.03
VCAN-207ENST00000507162 A8MU10 97 aa2.4□□□□□ -2.03
VCAN-207ENST00000507162 TP53AIP1Q9HCN2 124 aa2.4□□□□□ -2.03
VCAN-207ENST00000507162 A6NED7 52 aa2.38□□□□□ -2.03
VCAN-207ENST00000507162 ATXN8Q156A1 80 aa2.38□□□□□ -2.03
VCAN-207ENST00000507162 TRAV22A0A0B4J277 110 aa2.37□□□□□ -2.03
VCAN-207ENST00000507162 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
VCAN-207ENST00000507162 SPATA45Q537H7 98 aa2.36□□□□□ -2.03
VCAN-207ENST00000507162 LOC101927531A0A1B0GV80 90 aa2.34□□□□□ -2.03
VCAN-207ENST00000507162 VAMP8Q9BV40 100 aa2.34□□□□□ -2.03
VCAN-207ENST00000507162 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
VCAN-207ENST00000507162 SPINT4Q6UDR6 99 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms