RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 COL6A5A8TX70 2615 aa3.18□□□□□ -1.9
CLDND1-213ENST00000506927 STAB2Q8WWQ8 2551 aa3.16□□□□□ -1.9
CLDND1-213ENST00000506927 DNAH17Q9UFH2 4485 aa3.16□□□□□ -1.9
CLDND1-213ENST00000506927 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
CLDND1-213ENST00000506927 LYSTQ99698 3801 aa3.16□□□□□ -1.9
CLDND1-213ENST00000506927 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
CLDND1-213ENST00000506927 DNAH8Q96JB1 4490 aa3.15□□□□□ -1.91
CLDND1-213ENST00000506927 COL7A1Q02388 2944 aa3.14□□□□□ -1.91
CLDND1-213ENST00000506927 PLECQ15149 4684 aaKnown RBP3.14□□□□□ -1.91
CLDND1-213ENST00000506927 MGAM2Q2M2H8 2515 aa3.14□□□□□ -1.91
CLDND1-213ENST00000506927 KRTAP21-3Q3LHN1 58 aa3.14□□□□□ -1.91
CLDND1-213ENST00000506927 DNAH6Q9C0G6 4158 aa3.13□□□□□ -1.91
CLDND1-213ENST00000506927 H0YAA0 97 aa3.13□□□□□ -1.91
CLDND1-213ENST00000506927 PRKDCP78527 4128 aaKnown RBP3.12□□□□□ -1.91
CLDND1-213ENST00000506927 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
CLDND1-213ENST00000506927 C9orf92A6NGG3 77 aa3.12□□□□□ -1.91
CLDND1-213ENST00000506927 ROMO1P60602 79 aa3.12□□□□□ -1.91
CLDND1-213ENST00000506927 RPL37P61927 97 aaKnown RBP3.12□□□□□ -1.91
CLDND1-213ENST00000506927 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
CLDND1-213ENST00000506927 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
CLDND1-213ENST00000506927 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
CLDND1-213ENST00000506927 DNAH7Q8WXX0 4024 aa3.1□□□□□ -1.91
CLDND1-213ENST00000506927 DNAH2Q9P225 4427 aa3.1□□□□□ -1.91
CLDND1-213ENST00000506927 CSMD3Q7Z407 3707 aa3.09□□□□□ -1.92
CLDND1-213ENST00000506927 S4R3F8 94 aa3.08□□□□□ -1.92
CLDND1-213ENST00000506927 MEGF8Q7Z7M0 2845 aa3.07□□□□□ -1.92
CLDND1-213ENST00000506927 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
CLDND1-213ENST00000506927 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
CLDND1-213ENST00000506927 STARD9Q9P2P6 4700 aa3.05□□□□□ -1.92
CLDND1-213ENST00000506927 M0QZ58 72 aa3.04□□□□□ -1.92
CLDND1-213ENST00000506927 SMR3BP02814 79 aaPredicted RBP3.04□□□□□ -1.92
CLDND1-213ENST00000506927 TGP01266 2768 aa3.03□□□□□ -1.92
CLDND1-213ENST00000506927 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.92
CLDND1-213ENST00000506927 A0A1B0GVY2 172 aa3.03□□□□□ -1.92
CLDND1-213ENST00000506927 FBN3Q75N90 2809 aa3.02□□□□□ -1.93
CLDND1-213ENST00000506927 KMT2AQ03164 3969 aa3.02□□□□□ -1.93
CLDND1-213ENST00000506927 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
CLDND1-213ENST00000506927 KRTAP10-8P60410 259 aa3.01□□□□□ -1.93
CLDND1-213ENST00000506927 KRTAP10-4P60372 401 aaPredicted RBP3□□□□□ -1.93
CLDND1-213ENST00000506927 SPINT4Q6UDR6 99 aa3□□□□□ -1.93
CLDND1-213ENST00000506927 DNAH5Q8TE73 4624 aa2.99□□□□□ -1.93
CLDND1-213ENST00000506927 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CLDND1-213ENST00000506927 PKD1P98161 4303 aa2.97□□□□□ -1.93
CLDND1-213ENST00000506927 VPS13BQ7Z7G8 4022 aa2.96□□□□□ -1.94
CLDND1-213ENST00000506927 SACSQ9NZJ4 4579 aa2.95□□□□□ -1.94
CLDND1-213ENST00000506927 LRP1BQ9NZR2 4599 aa2.95□□□□□ -1.94
CLDND1-213ENST00000506927 A0A0D9SG42 100 aa2.95□□□□□ -1.94
CLDND1-213ENST00000506927 Q5VSD8 79 aa2.94□□□□□ -1.94
CLDND1-213ENST00000506927 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
CLDND1-213ENST00000506927 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
CLDND1-213ENST00000506927 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
CLDND1-213ENST00000506927 PKHD1L1Q86WI1 4243 aa2.89□□□□□ -1.95
CLDND1-213ENST00000506927 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
CLDND1-213ENST00000506927 P0C880 135 aa2.87□□□□□ -1.95
CLDND1-213ENST00000506927 KRTAP12-1P59990 96 aa2.87□□□□□ -1.95
CLDND1-213ENST00000506927 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
CLDND1-213ENST00000506927 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
CLDND1-213ENST00000506927 R4GN34 69 aa2.87□□□□□ -1.95
CLDND1-213ENST00000506927 PKHD1P08F94 4074 aa2.87□□□□□ -1.95
CLDND1-213ENST00000506927 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
CLDND1-213ENST00000506927 FLG2Q5D862 2391 aaPredicted RBP2.86□□□□□ -1.95
CLDND1-213ENST00000506927 APOBP04114 4563 aaKnown RBP2.85□□□□□ -1.95
CLDND1-213ENST00000506927 DMBT1Q9UGM3 2413 aaPredicted RBP2.8□□□□□ -1.96
CLDND1-213ENST00000506927 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
CLDND1-213ENST00000506927 HYDINQ4G0P3 5121 aa2.8□□□□□ -1.96
CLDND1-213ENST00000506927 DYNC1H1Q14204 4646 aaKnown RBP2.79□□□□□ -1.96
CLDND1-213ENST00000506927 MT1HL1P0DM35 61 aa2.79□□□□□ -1.96
CLDND1-213ENST00000506927 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
CLDND1-213ENST00000506927 TNXBP22105 4242 aa2.78□□□□□ -1.96
CLDND1-213ENST00000506927 FAT3Q8TDW7 4589 aa2.77□□□□□ -1.97
CLDND1-213ENST00000506927 PLAC4Q8WY50 150 aa2.76□□□□□ -1.97
CLDND1-213ENST00000506927 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
CLDND1-213ENST00000506927 CAMK2N1Q7Z7J9 78 aa2.75□□□□□ -1.97
CLDND1-213ENST00000506927 FAT1Q14517 4588 aa2.75□□□□□ -1.97
CLDND1-213ENST00000506927 HSPG2P98160 4391 aa2.74□□□□□ -1.97
CLDND1-213ENST00000506927 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
CLDND1-213ENST00000506927 LRP1Q07954 4544 aaKnown RBP2.72□□□□□ -1.97
CLDND1-213ENST00000506927 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
CLDND1-213ENST00000506927 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
CLDND1-213ENST00000506927 DNHD1Q96M86 4753 aa2.7□□□□□ -1.98
CLDND1-213ENST00000506927 TNP1P09430 55 aa2.69□□□□□ -1.98
CLDND1-213ENST00000506927 RYR2Q92736 4967 aa2.62□□□□□ -1.99
CLDND1-213ENST00000506927 MYCBP2O75592 4640 aa2.6□□□□□ -1.99
CLDND1-213ENST00000506927 RYR1P21817 5038 aa2.57□□□□□ -2
CLDND1-213ENST00000506927 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
CLDND1-213ENST00000506927 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
CLDND1-213ENST00000506927 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
CLDND1-213ENST00000506927 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
CLDND1-213ENST00000506927 LRP2P98164 4655 aa2.5□□□□□ -2.01
CLDND1-213ENST00000506927 KRTAP4-1Q9BYQ7 146 aa2.5□□□□□ -2.01
CLDND1-213ENST00000506927 KMT2CQ8NEZ4 4911 aaKnown RBP2.49□□□□□ -2.01
CLDND1-213ENST00000506927 MUC17Q685J3 4493 aa2.49□□□□□ -2.01
CLDND1-213ENST00000506927 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
CLDND1-213ENST00000506927 M0R2T5 61 aa2.47□□□□□ -2.01
CLDND1-213ENST00000506927 RYR3Q15413 4870 aa2.46□□□□□ -2.02
CLDND1-213ENST00000506927 INE1O15225 51 aa2.46□□□□□ -2.02
CLDND1-213ENST00000506927 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
CLDND1-213ENST00000506927 LPAP08519 4548 aa2.46□□□□□ -2.02
CLDND1-213ENST00000506927 KIAA1109Q2LD37 5005 aa2.42□□□□□ -2.02
CLDND1-213ENST00000506927 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms