RNA–Protein interactions for RNA: ENST00000503937.5

SEC31A-213, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC31A, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-213ENST00000503937 SPINT4Q6UDR6 99 aa4.24□□□□□ -1.73
SEC31A-213ENST00000503937 DNAH7Q8WXX0 4024 aa4.24□□□□□ -1.73
SEC31A-213ENST00000503937 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
SEC31A-213ENST00000503937 KRTAP13-2Q52LG2 175 aa4.2□□□□□ -1.74
SEC31A-213ENST00000503937 C20orf166-AS1Q96NR2 134 aa4.2□□□□□ -1.74
SEC31A-213ENST00000503937 CSMD3Q7Z407 3707 aa4.2□□□□□ -1.74
SEC31A-213ENST00000503937 COX6B2Q6YFQ2 88 aa4.19□□□□□ -1.74
SEC31A-213ENST00000503937 LYSTQ99698 3801 aa4.19□□□□□ -1.74
SEC31A-213ENST00000503937 CRIPTQ9P021 101 aa4.19□□□□□ -1.74
SEC31A-213ENST00000503937 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
SEC31A-213ENST00000503937 NDUFAF8A1L188 74 aa4.15□□□□□ -1.74
SEC31A-213ENST00000503937 TPRXLQ17RH7 258 aa4.15□□□□□ -1.74
SEC31A-213ENST00000503937 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
SEC31A-213ENST00000503937 DNAH17Q9UFH2 4485 aa4.15□□□□□ -1.75
SEC31A-213ENST00000503937 STARD9Q9P2P6 4700 aa4.15□□□□□ -1.75
SEC31A-213ENST00000503937 FRAS1Q86XX4 4008 aa4.14□□□□□ -1.75
SEC31A-213ENST00000503937 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
SEC31A-213ENST00000503937 DNAH6Q9C0G6 4158 aa4.1□□□□□ -1.75
SEC31A-213ENST00000503937 KRTAP1-4P0C5Y4 121 aa4.1□□□□□ -1.75
SEC31A-213ENST00000503937 PLECQ15149 4684 aaKnown RBP4.07□□□□□ -1.76
SEC31A-213ENST00000503937 HECTD4Q9Y4D8 3996 aa4.07□□□□□ -1.76
SEC31A-213ENST00000503937 KMT2AQ03164 3969 aa4.06□□□□□ -1.76
SEC31A-213ENST00000503937 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
SEC31A-213ENST00000503937 A0A1B0GVY2 172 aa4.03□□□□□ -1.76
SEC31A-213ENST00000503937 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
SEC31A-213ENST00000503937 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
SEC31A-213ENST00000503937 KRTAP10-1P60331 282 aa4.01□□□□□ -1.77
SEC31A-213ENST00000503937 S4R3F8 94 aa4.01□□□□□ -1.77
SEC31A-213ENST00000503937 A0A0D9SG42 100 aa4□□□□□ -1.77
SEC31A-213ENST00000503937 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
SEC31A-213ENST00000503937 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
SEC31A-213ENST00000503937 DNAH11Q96DT5 4516 aa3.99□□□□□ -1.77
SEC31A-213ENST00000503937 SACSQ9NZJ4 4579 aa3.96□□□□□ -1.78
SEC31A-213ENST00000503937 C9orf92A6NGG3 77 aa3.96□□□□□ -1.78
SEC31A-213ENST00000503937 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
SEC31A-213ENST00000503937 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
SEC31A-213ENST00000503937 HYDINQ4G0P3 5121 aa3.95□□□□□ -1.78
SEC31A-213ENST00000503937 KMT2CQ8NEZ4 4911 aaKnown RBP3.94□□□□□ -1.78
SEC31A-213ENST00000503937 RYR2Q92736 4967 aa3.93□□□□□ -1.78
SEC31A-213ENST00000503937 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
SEC31A-213ENST00000503937 SMR3BP02814 79 aaPredicted RBP3.91□□□□□ -1.78
SEC31A-213ENST00000503937 FAT2Q9NYQ8 4349 aa3.91□□□□□ -1.78
SEC31A-213ENST00000503937 KRTAP12-1P59990 96 aa3.9□□□□□ -1.78
SEC31A-213ENST00000503937 DNAH5Q8TE73 4624 aa3.9□□□□□ -1.79
SEC31A-213ENST00000503937 PKD1P98161 4303 aa3.88□□□□□ -1.79
SEC31A-213ENST00000503937 M0QZ58 72 aa3.88□□□□□ -1.79
SEC31A-213ENST00000503937 PKHD1P08F94 4074 aa3.87□□□□□ -1.79
SEC31A-213ENST00000503937 Q5VSD8 79 aa3.87□□□□□ -1.79
SEC31A-213ENST00000503937 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
SEC31A-213ENST00000503937 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
SEC31A-213ENST00000503937 RYR3Q15413 4870 aa3.83□□□□□ -1.8
SEC31A-213ENST00000503937 KRTAP10-4P60372 401 aaPredicted RBP3.79□□□□□ -1.8
SEC31A-213ENST00000503937 PKHD1L1Q86WI1 4243 aa3.79□□□□□ -1.8
SEC31A-213ENST00000503937 DYNC1H1Q14204 4646 aaKnown RBP3.77□□□□□ -1.81
SEC31A-213ENST00000503937 VPS13BQ7Z7G8 4022 aa3.76□□□□□ -1.81
SEC31A-213ENST00000503937 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
SEC31A-213ENST00000503937 APOBP04114 4563 aaKnown RBP3.73□□□□□ -1.81
SEC31A-213ENST00000503937 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
SEC31A-213ENST00000503937 HSPG2P98160 4391 aa3.73□□□□□ -1.81
SEC31A-213ENST00000503937 EPPK1P58107 5090 aaKnown RBP3.72□□□□□ -1.81
SEC31A-213ENST00000503937 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
SEC31A-213ENST00000503937 MT3P25713 68 aa3.68□□□□□ -1.82
SEC31A-213ENST00000503937 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
SEC31A-213ENST00000503937 RYR1P21817 5038 aa3.66□□□□□ -1.82
SEC31A-213ENST00000503937 KIAA1109Q2LD37 5005 aa3.66□□□□□ -1.82
SEC31A-213ENST00000503937 BIRC6Q9NR09 4857 aa3.66□□□□□ -1.82
SEC31A-213ENST00000503937 MYCBP2O75592 4640 aa3.66□□□□□ -1.82
SEC31A-213ENST00000503937 MT1HL1P0DM35 61 aa3.64□□□□□ -1.83
SEC31A-213ENST00000503937 FAT3Q8TDW7 4589 aa3.64□□□□□ -1.83
SEC31A-213ENST00000503937 CAMK2N1Q7Z7J9 78 aa3.63□□□□□ -1.83
SEC31A-213ENST00000503937 R4GN34 69 aa3.63□□□□□ -1.83
SEC31A-213ENST00000503937 DMBT1Q9UGM3 2413 aaPredicted RBP3.63□□□□□ -1.83
SEC31A-213ENST00000503937 FAT1Q14517 4588 aa3.63□□□□□ -1.83
SEC31A-213ENST00000503937 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
SEC31A-213ENST00000503937 TNXBP22105 4242 aa3.6□□□□□ -1.83
SEC31A-213ENST00000503937 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
SEC31A-213ENST00000503937 HERC2O95714 4834 aa3.58□□□□□ -1.84
SEC31A-213ENST00000503937 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
SEC31A-213ENST00000503937 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
SEC31A-213ENST00000503937 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
SEC31A-213ENST00000503937 ABCA13Q86UQ4 5058 aa3.49□□□□□ -1.85
SEC31A-213ENST00000503937 INE1O15225 51 aa3.47□□□□□ -1.85
SEC31A-213ENST00000503937 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
SEC31A-213ENST00000503937 TNP1P09430 55 aa3.45□□□□□ -1.86
SEC31A-213ENST00000503937 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
SEC31A-213ENST00000503937 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
SEC31A-213ENST00000503937 HERC1Q15751 4861 aa3.29□□□□□ -1.88
SEC31A-213ENST00000503937 LPAP08519 4548 aa3.27□□□□□ -1.89
SEC31A-213ENST00000503937 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
SEC31A-213ENST00000503937 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
SEC31A-213ENST00000503937 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
SEC31A-213ENST00000503937 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
SEC31A-213ENST00000503937 LRP2P98164 4655 aa3.22□□□□□ -1.89
SEC31A-213ENST00000503937 MUC17Q685J3 4493 aa3.22□□□□□ -1.89
SEC31A-213ENST00000503937 KRTAP19-2Q3LHN2 52 aa3.2□□□□□ -1.9
SEC31A-213ENST00000503937 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
SEC31A-213ENST00000503937 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
SEC31A-213ENST00000503937 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
SEC31A-213ENST00000503937 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
SEC31A-213ENST00000503937 M0R2T5 61 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms