RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 ETDBQ3ZM63 59 aa1.76□□□□□ -2.13
RFC1-205ENST00000502991 KCNQ1DNQ9H478 68 aa1.76□□□□□ -2.13
RFC1-205ENST00000502991 DNAH9Q9NYC9 4486 aa1.76□□□□□ -2.13
RFC1-205ENST00000502991 MEGF8Q7Z7M0 2845 aa1.76□□□□□ -2.13
RFC1-205ENST00000502991 TENM2Q9NT68 2774 aa1.76□□□□□ -2.13
RFC1-205ENST00000502991 SPRR1AP35321 89 aa1.75□□□□□ -2.13
RFC1-205ENST00000502991 CSMD3Q7Z407 3707 aa1.75□□□□□ -2.13
RFC1-205ENST00000502991 COX7BP24311 80 aa1.74□□□□□ -2.13
RFC1-205ENST00000502991 FLG2Q5D862 2391 aaPredicted RBP1.74□□□□□ -2.13
RFC1-205ENST00000502991 LY6G6CO95867 125 aa1.73□□□□□ -2.13
RFC1-205ENST00000502991 RPL37P61927 97 aaKnown RBP1.73□□□□□ -2.13
RFC1-205ENST00000502991 DYNC2H1Q8NCM8 4307 aaKnown RBP1.72□□□□□ -2.13
RFC1-205ENST00000502991 IGLV5-48A0A075B6I7 105 aa1.72□□□□□ -2.13
RFC1-205ENST00000502991 A0A096LNI7 61 aa1.72□□□□□ -2.13
RFC1-205ENST00000502991 ETDCA0A1B0GVM5 59 aa1.72□□□□□ -2.13
RFC1-205ENST00000502991 Q6ZRX8 168 aa1.72□□□□□ -2.13
RFC1-205ENST00000502991 DNHD1Q96M86 4753 aa1.71□□□□□ -2.14
RFC1-205ENST00000502991 TGP01266 2768 aa1.71□□□□□ -2.14
RFC1-205ENST00000502991 PLECQ15149 4684 aaKnown RBP1.71□□□□□ -2.14
RFC1-205ENST00000502991 SPRR4Q96PI1 79 aa1.71□□□□□ -2.14
RFC1-205ENST00000502991 PLAC8Q9NZF1 115 aa1.71□□□□□ -2.14
RFC1-205ENST00000502991 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
RFC1-205ENST00000502991 DNAH7Q8WXX0 4024 aa1.7□□□□□ -2.14
RFC1-205ENST00000502991 TRBV7-4A0A0J9YYF1 115 aa1.7□□□□□ -2.14
RFC1-205ENST00000502991 SPRR1BP22528 89 aa1.7□□□□□ -2.14
RFC1-205ENST00000502991 LINC00643Q86TS7 51 aa1.7□□□□□ -2.14
RFC1-205ENST00000502991 LINC00472Q9H8W2 130 aa1.7□□□□□ -2.14
RFC1-205ENST00000502991 DNAH1Q9P2D7 4330 aa1.7□□□□□ -2.14
RFC1-205ENST00000502991 PRKDCP78527 4128 aaKnown RBP1.7□□□□□ -2.14
RFC1-205ENST00000502991 LYSTQ99698 3801 aa1.7□□□□□ -2.14
RFC1-205ENST00000502991 LCE6AA0A183 80 aa1.69□□□□□ -2.14
RFC1-205ENST00000502991 F8WEM9 126 aa1.69□□□□□ -2.14
RFC1-205ENST00000502991 Q6JHZ5 121 aa1.69□□□□□ -2.14
RFC1-205ENST00000502991 Q6ZSA8 131 aa1.69□□□□□ -2.14
RFC1-205ENST00000502991 PRR15LQ9BU68 103 aa1.69□□□□□ -2.14
RFC1-205ENST00000502991 UBL5Q9BZL1 73 aa1.69□□□□□ -2.14
RFC1-205ENST00000502991 STARD9Q9P2P6 4700 aa1.69□□□□□ -2.14
RFC1-205ENST00000502991 VPS13DQ5THJ4 4388 aa1.69□□□□□ -2.14
RFC1-205ENST00000502991 ATP5EP2Q5VTU8 51 aa1.68□□□□□ -2.14
RFC1-205ENST00000502991 DEFB105AQ8NG35 78 aa1.67□□□□□ -2.14
RFC1-205ENST00000502991 LINC00846Q9NV44 126 aa1.67□□□□□ -2.14
RFC1-205ENST00000502991 DNAH10Q8IVF4 4471 aa1.67□□□□□ -2.14
RFC1-205ENST00000502991 KMT2AQ03164 3969 aa1.67□□□□□ -2.14
RFC1-205ENST00000502991 PRLHP81277 87 aa1.66□□□□□ -2.14
RFC1-205ENST00000502991 NREPQ16612 68 aa1.66□□□□□ -2.14
RFC1-205ENST00000502991 SSBP3-AS1Q7Z2R9 100 aa1.66□□□□□ -2.14
RFC1-205ENST00000502991 DNAH2Q9P225 4427 aa1.64□□□□□ -2.15
RFC1-205ENST00000502991 A0A087WVE0 104 aa1.64□□□□□ -2.15
RFC1-205ENST00000502991 HAMPP81172 84 aa1.64□□□□□ -2.15
RFC1-205ENST00000502991 SPINK6Q6UWN8 80 aa1.64□□□□□ -2.15
RFC1-205ENST00000502991 HECTD4Q9Y4D8 3996 aa1.64□□□□□ -2.15
RFC1-205ENST00000502991 SRRM2Q9UQ35 2752 aaKnown RBP1.64□□□□□ -2.15
RFC1-205ENST00000502991 DNAH17Q9UFH2 4485 aa1.64□□□□□ -2.15
RFC1-205ENST00000502991 DNAH6Q9C0G6 4158 aa1.62□□□□□ -2.15
RFC1-205ENST00000502991 NDUFB1O75438 58 aa1.62□□□□□ -2.15
RFC1-205ENST00000502991 PKD1P98161 4303 aa1.62□□□□□ -2.15
RFC1-205ENST00000502991 SPINK1P00995 79 aa1.61□□□□□ -2.15
RFC1-205ENST00000502991 RPS29P62273 56 aaKnown RBP1.61□□□□□ -2.15
RFC1-205ENST00000502991 FRAS1Q86XX4 4008 aa1.61□□□□□ -2.15
RFC1-205ENST00000502991 DNAH8Q96JB1 4490 aa1.6□□□□□ -2.15
RFC1-205ENST00000502991 DNAH11Q96DT5 4516 aa1.6□□□□□ -2.15
RFC1-205ENST00000502991 ALMS1Q8TCU4 4167 aa1.59□□□□□ -2.15
RFC1-205ENST00000502991 SACSQ9NZJ4 4579 aa1.59□□□□□ -2.15
RFC1-205ENST00000502991 SPATA8Q6RVD6 105 aa1.59□□□□□ -2.15
RFC1-205ENST00000502991 TP53AIP1Q9HCN2 124 aa1.59□□□□□ -2.15
RFC1-205ENST00000502991 FAT2Q9NYQ8 4349 aa1.59□□□□□ -2.16
RFC1-205ENST00000502991 LRP1BQ9NZR2 4599 aa1.59□□□□□ -2.16
RFC1-205ENST00000502991 DNAH5Q8TE73 4624 aa1.59□□□□□ -2.16
RFC1-205ENST00000502991 HYDINQ4G0P3 5121 aa1.58□□□□□ -2.16
RFC1-205ENST00000502991 K7EQZ3 153 aa1.58□□□□□ -2.16
RFC1-205ENST00000502991 KRTAP10-4P60372 401 aaPredicted RBP1.58□□□□□ -2.16
RFC1-205ENST00000502991 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
RFC1-205ENST00000502991 SMR3BP02814 79 aaPredicted RBP1.57□□□□□ -2.16
RFC1-205ENST00000502991 H0Y9P7 68 aa1.56□□□□□ -2.16
RFC1-205ENST00000502991 MRPL34Q9BQ48 92 aaKnown RBP1.56□□□□□ -2.16
RFC1-205ENST00000502991 KMT2CQ8NEZ4 4911 aaKnown RBP1.56□□□□□ -2.16
RFC1-205ENST00000502991 VPS13BQ7Z7G8 4022 aa1.56□□□□□ -2.16
RFC1-205ENST00000502991 MMP24-AS1A0A0U1RRL7 71 aa1.55□□□□□ -2.16
RFC1-205ENST00000502991 SPINK7P58062 85 aa1.55□□□□□ -2.16
RFC1-205ENST00000502991 Q5VSD8 79 aa1.55□□□□□ -2.16
RFC1-205ENST00000502991 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
RFC1-205ENST00000502991 WFDC13Q8IUB5 93 aa1.54□□□□□ -2.16
RFC1-205ENST00000502991 DYNC1H1Q14204 4646 aaKnown RBP1.54□□□□□ -2.16
RFC1-205ENST00000502991 RYR2Q92736 4967 aa1.53□□□□□ -2.16
RFC1-205ENST00000502991 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
RFC1-205ENST00000502991 APOBP04114 4563 aaKnown RBP1.52□□□□□ -2.17
RFC1-205ENST00000502991 FAT1Q14517 4588 aa1.51□□□□□ -2.17
RFC1-205ENST00000502991 RYR3Q15413 4870 aa1.5□□□□□ -2.17
RFC1-205ENST00000502991 MT1HL1P0DM35 61 aa1.49□□□□□ -2.17
RFC1-205ENST00000502991 DMBT1Q9UGM3 2413 aaPredicted RBP1.48□□□□□ -2.17
RFC1-205ENST00000502991 HSPG2P98160 4391 aa1.47□□□□□ -2.17
RFC1-205ENST00000502991 A0A1B0GU69 56 aa1.47□□□□□ -2.17
RFC1-205ENST00000502991 RYR1P21817 5038 aa1.46□□□□□ -2.18
RFC1-205ENST00000502991 PKHD1L1Q86WI1 4243 aa1.46□□□□□ -2.18
RFC1-205ENST00000502991 A0A0D9SG42 100 aa1.46□□□□□ -2.18
RFC1-205ENST00000502991 C9orf92A6NGG3 77 aa1.46□□□□□ -2.18
RFC1-205ENST00000502991 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
RFC1-205ENST00000502991 LRP1Q07954 4544 aaKnown RBP1.46□□□□□ -2.18
RFC1-205ENST00000502991 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
RFC1-205ENST00000502991 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms