RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 D6R8Y8 96 aa1.14□□□□□ -2.23
SMC4-224ENST00000494612 MT2AP02795 61 aa1.14□□□□□ -2.23
SMC4-224ENST00000494612 IFI27L1Q96BM0 104 aa1.14□□□□□ -2.23
SMC4-224ENST00000494612 LINC00587B1AMM8 73 aa1.13□□□□□ -2.23
SMC4-224ENST00000494612 MT1FP04733 61 aa1.13□□□□□ -2.23
SMC4-224ENST00000494612 S100A8P05109 93 aa1.13□□□□□ -2.23
SMC4-224ENST00000494612 SPINK8P0C7L1 97 aa1.13□□□□□ -2.23
SMC4-224ENST00000494612 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
SMC4-224ENST00000494612 S100A7L2Q5SY68 101 aa1.13□□□□□ -2.23
SMC4-224ENST00000494612 LINC00208Q96KT6 92 aa1.13□□□□□ -2.23
SMC4-224ENST00000494612 AMELXQ99217 191 aa1.13□□□□□ -2.23
SMC4-224ENST00000494612 IGIPA6NJ69 53 aa1.12□□□□□ -2.23
SMC4-224ENST00000494612 LINC00158P58513 81 aa1.12□□□□□ -2.23
SMC4-224ENST00000494612 COX17Q14061 63 aa1.12□□□□□ -2.23
SMC4-224ENST00000494612 MRPL54Q6P161 138 aaKnown RBP1.12□□□□□ -2.23
SMC4-224ENST00000494612 SPRR1AP35321 89 aa1.11□□□□□ -2.23
SMC4-224ENST00000494612 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
SMC4-224ENST00000494612 SFTA2Q6UW10 78 aa1.11□□□□□ -2.23
SMC4-224ENST00000494612 LINC00575Q6W349 94 aa1.11□□□□□ -2.23
SMC4-224ENST00000494612 Q8N8P6 123 aa1.11□□□□□ -2.23
SMC4-224ENST00000494612 KCNQ1DNQ9H478 68 aa1.11□□□□□ -2.23
SMC4-224ENST00000494612 V9GYV3 84 aa1.11□□□□□ -2.23
SMC4-224ENST00000494612 TRBV10-3A0A0K0K1G6 114 aa1.1□□□□□ -2.23
SMC4-224ENST00000494612 SMIM27A0A1W2PRY6 76 aa1.1□□□□□ -2.23
SMC4-224ENST00000494612 K7EMI3 77 aa1.1□□□□□ -2.23
SMC4-224ENST00000494612 ADIRFQ15847 76 aa1.1□□□□□ -2.23
SMC4-224ENST00000494612 ALKAL2Q6UX46 152 aa1.1□□□□□ -2.23
SMC4-224ENST00000494612 Q6ZRX8 168 aa1.1□□□□□ -2.23
SMC4-224ENST00000494612 SPTSSBQ8NFR3 76 aa1.1□□□□□ -2.23
SMC4-224ENST00000494612 NXT2Q9NPJ8 142 aaKnown RBP1.1□□□□□ -2.23
SMC4-224ENST00000494612 KMT2DO14686 5537 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 TEX49A0A1B0GTD5 131 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 A0A1W2PPM0 123 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 SMIM13P0DJ93 91 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 TMEM170BQ5T4T1 132 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 PRO1933Q9H354 126 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 SERP1Q9Y6X1 66 aa1.09□□□□□ -2.23
SMC4-224ENST00000494612 LINC01549A6NIU2 74 aa1.08□□□□□ -2.24
SMC4-224ENST00000494612 S100A1P23297 94 aa1.08□□□□□ -2.24
SMC4-224ENST00000494612 NPC2P61916 151 aa1.08□□□□□ -2.24
SMC4-224ENST00000494612 DEFB105AQ8NG35 78 aa1.08□□□□□ -2.24
SMC4-224ENST00000494612 Q96NJ1 140 aa1.08□□□□□ -2.24
SMC4-224ENST00000494612 SMCO4Q9NRQ5 59 aa1.08□□□□□ -2.24
SMC4-224ENST00000494612 IGLC3P0DOY3 106 aa1.07□□□□□ -2.24
SMC4-224ENST00000494612 SPRR1BP22528 89 aa1.07□□□□□ -2.24
SMC4-224ENST00000494612 RBM3P98179 157 aaKnown RBP1.07□□□□□ -2.24
SMC4-224ENST00000494612 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
SMC4-224ENST00000494612 MYMXA0A1B0GTQ4 84 aa1.06□□□□□ -2.24
SMC4-224ENST00000494612 C20orf197Q8N268 126 aa1.06□□□□□ -2.24
SMC4-224ENST00000494612 F8WEM9 126 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 SPRR2EP22531 72 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 COX7BP24311 80 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 SPRR2BP35325 72 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 SPRR2AP35326 72 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 KLKP1Q107X0 134 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 PEA15Q15121 130 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 BAGE3Q86Y29 109 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 PLAC4Q8WY50 150 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
SMC4-224ENST00000494612 TRBV7-7A0A0K0K1E9 115 aa1.04□□□□□ -2.24
SMC4-224ENST00000494612 S100PP25815 95 aa1.04□□□□□ -2.24
SMC4-224ENST00000494612 ELOF1P60002 83 aaKnown RBP1.04□□□□□ -2.24
SMC4-224ENST00000494612 PMCHL1Q16048 86 aa1.04□□□□□ -2.24
SMC4-224ENST00000494612 LINC01546A6NGU7 62 aa1.03□□□□□ -2.24
SMC4-224ENST00000494612 Q6JHZ5 121 aa1.03□□□□□ -2.24
SMC4-224ENST00000494612 IGLV5-48A0A075B6I7 105 aa1.02□□□□□ -2.25
SMC4-224ENST00000494612 TRAV13-2A0A0B4J235 113 aa1.02□□□□□ -2.25
SMC4-224ENST00000494612 ZNF815PA8K554 130 aa1.02□□□□□ -2.25
SMC4-224ENST00000494612 Q5VV11 94 aa1.02□□□□□ -2.25
SMC4-224ENST00000494612 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
SMC4-224ENST00000494612 DSCR8Q96T75 97 aa1.02□□□□□ -2.25
SMC4-224ENST00000494612 SPANXDQ9BXN6 97 aa1.02□□□□□ -2.25
SMC4-224ENST00000494612 HCG22E2RYF7 251 aa1.01□□□□□ -2.25
SMC4-224ENST00000494612 SPRR2DP22532 72 aa1.01□□□□□ -2.25
SMC4-224ENST00000494612 LINC00308Q8TCZ7 52 aa1.01□□□□□ -2.25
SMC4-224ENST00000494612 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
SMC4-224ENST00000494612 PLNP26678 52 aa1□□□□□ -2.25
SMC4-224ENST00000494612 SPINK7P58062 85 aa1□□□□□ -2.25
SMC4-224ENST00000494612 WFDC13Q8IUB5 93 aa1□□□□□ -2.25
SMC4-224ENST00000494612 SVBPQ8N300 66 aa1□□□□□ -2.25
SMC4-224ENST00000494612 C18orf32Q8TCD1 76 aa1□□□□□ -2.25
SMC4-224ENST00000494612 SNHG12Q9BXW3 62 aa1□□□□□ -2.25
SMC4-224ENST00000494612 H3BUT2 72 aa0.99□□□□□ -2.25
SMC4-224ENST00000494612 MT1BP07438 61 aa0.99□□□□□ -2.25
SMC4-224ENST00000494612 GTF2H5Q6ZYL4 71 aa0.99□□□□□ -2.25
SMC4-224ENST00000494612 C12orf57Q99622 126 aa0.99□□□□□ -2.25
SMC4-224ENST00000494612 PMCHL2Q9BQD1 86 aa0.99□□□□□ -2.25
SMC4-224ENST00000494612 hADV29S1A0JD25 119 aa0.98□□□□□ -2.25
SMC4-224ENST00000494612 KRTAP8-1Q8IUC2 63 aa0.98□□□□□ -2.25
SMC4-224ENST00000494612 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
SMC4-224ENST00000494612 LEPROTL1O95214 131 aa0.97□□□□□ -2.25
SMC4-224ENST00000494612 C3orf79P0CE67 100 aa0.97□□□□□ -2.25
SMC4-224ENST00000494612 SMIM6P0DI80 62 aa0.97□□□□□ -2.25
SMC4-224ENST00000494612 IFITM1P13164 125 aa0.97□□□□□ -2.25
SMC4-224ENST00000494612 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
SMC4-224ENST00000494612 SMIM11BQ8TCY0 68 aa0.97□□□□□ -2.25
SMC4-224ENST00000494612 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
SMC4-224ENST00000494612 TMEM218A2RU14 115 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms