RNA–Protein interactions for RNA: ENST00000492220.1

RPRD2-204, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

TSL 5

Gene RPRD2, Length 4,780 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-204ENST00000492220 ALMS1Q8TCU4 4167 aa5.11□□□□□ -1.59
RPRD2-204ENST00000492220 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
RPRD2-204ENST00000492220 LORP23490 312 aaPredicted RBP5.05□□□□□ -1.6
RPRD2-204ENST00000492220 DNAH5Q8TE73 4624 aa5.05□□□□□ -1.6
RPRD2-204ENST00000492220 CMYA5Q8N3K9 4069 aa5.01□□□□□ -1.61
RPRD2-204ENST00000492220 PLECQ15149 4684 aaKnown RBP5.01□□□□□ -1.61
RPRD2-204ENST00000492220 DNAH10Q8IVF4 4471 aa4.99□□□□□ -1.61
RPRD2-204ENST00000492220 DNAH9Q9NYC9 4486 aa4.98□□□□□ -1.61
RPRD2-204ENST00000492220 CRCT1Q9UGL9 99 aa4.98□□□□□ -1.61
RPRD2-204ENST00000492220 DNAH3Q8TD57 4116 aa4.97□□□□□ -1.61
RPRD2-204ENST00000492220 DNAH11Q96DT5 4516 aa4.96□□□□□ -1.61
RPRD2-204ENST00000492220 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
RPRD2-204ENST00000492220 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
RPRD2-204ENST00000492220 MT1HP80294 61 aa4.92□□□□□ -1.62
RPRD2-204ENST00000492220 DNAH1Q9P2D7 4330 aa4.92□□□□□ -1.62
RPRD2-204ENST00000492220 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
RPRD2-204ENST00000492220 ANK2Q01484 3957 aa4.92□□□□□ -1.62
RPRD2-204ENST00000492220 MT2AP02795 61 aa4.88□□□□□ -1.63
RPRD2-204ENST00000492220 DNHD1Q96M86 4753 aa4.84□□□□□ -1.63
RPRD2-204ENST00000492220 DNAH2Q9P225 4427 aa4.84□□□□□ -1.63
RPRD2-204ENST00000492220 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
RPRD2-204ENST00000492220 FAT1Q14517 4588 aa4.81□□□□□ -1.64
RPRD2-204ENST00000492220 VPS13DQ5THJ4 4388 aa4.78□□□□□ -1.64
RPRD2-204ENST00000492220 DYNC1H1Q14204 4646 aaKnown RBP4.78□□□□□ -1.64
RPRD2-204ENST00000492220 DNAH17Q9UFH2 4485 aa4.77□□□□□ -1.65
RPRD2-204ENST00000492220 DYNC2H1Q8NCM8 4307 aaKnown RBP4.76□□□□□ -1.65
RPRD2-204ENST00000492220 MT1FP04733 61 aa4.73□□□□□ -1.65
RPRD2-204ENST00000492220 RYR1P21817 5038 aa4.71□□□□□ -1.66
RPRD2-204ENST00000492220 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
RPRD2-204ENST00000492220 LRP1BQ9NZR2 4599 aa4.69□□□□□ -1.66
RPRD2-204ENST00000492220 SACSQ9NZJ4 4579 aa4.67□□□□□ -1.66
RPRD2-204ENST00000492220 LYSTQ99698 3801 aa4.66□□□□□ -1.66
RPRD2-204ENST00000492220 STARD9Q9P2P6 4700 aa4.65□□□□□ -1.66
RPRD2-204ENST00000492220 DNAH7Q8WXX0 4024 aa4.65□□□□□ -1.66
RPRD2-204ENST00000492220 PRKDCP78527 4128 aaKnown RBP4.65□□□□□ -1.67
RPRD2-204ENST00000492220 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
RPRD2-204ENST00000492220 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
RPRD2-204ENST00000492220 DNAH8Q96JB1 4490 aa4.6□□□□□ -1.67
RPRD2-204ENST00000492220 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
RPRD2-204ENST00000492220 FAT2Q9NYQ8 4349 aa4.59□□□□□ -1.68
RPRD2-204ENST00000492220 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
RPRD2-204ENST00000492220 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
RPRD2-204ENST00000492220 DNAH6Q9C0G6 4158 aa4.55□□□□□ -1.68
RPRD2-204ENST00000492220 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
RPRD2-204ENST00000492220 KMT2AQ03164 3969 aa4.53□□□□□ -1.68
RPRD2-204ENST00000492220 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
RPRD2-204ENST00000492220 HECTD4Q9Y4D8 3996 aa4.51□□□□□ -1.69
RPRD2-204ENST00000492220 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
RPRD2-204ENST00000492220 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
RPRD2-204ENST00000492220 RYR3Q15413 4870 aa4.46□□□□□ -1.7
RPRD2-204ENST00000492220 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
RPRD2-204ENST00000492220 RYR2Q92736 4967 aa4.42□□□□□ -1.7
RPRD2-204ENST00000492220 FRAS1Q86XX4 4008 aa4.42□□□□□ -1.7
RPRD2-204ENST00000492220 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.71
RPRD2-204ENST00000492220 HYDINQ4G0P3 5121 aa4.39□□□□□ -1.71
RPRD2-204ENST00000492220 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
RPRD2-204ENST00000492220 PKD1P98161 4303 aa4.36□□□□□ -1.71
RPRD2-204ENST00000492220 MT1XP80297 61 aa4.36□□□□□ -1.71
RPRD2-204ENST00000492220 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
RPRD2-204ENST00000492220 MT1BP07438 61 aa4.36□□□□□ -1.71
RPRD2-204ENST00000492220 HERC1Q15751 4861 aa4.31□□□□□ -1.72
RPRD2-204ENST00000492220 MYCBP2O75592 4640 aa4.3□□□□□ -1.72
RPRD2-204ENST00000492220 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
RPRD2-204ENST00000492220 VPS13BQ7Z7G8 4022 aa4.28□□□□□ -1.72
RPRD2-204ENST00000492220 HSPG2P98160 4391 aa4.28□□□□□ -1.72
RPRD2-204ENST00000492220 SPRR2EP22531 72 aa4.28□□□□□ -1.72
RPRD2-204ENST00000492220 SPRR2BP35325 72 aa4.28□□□□□ -1.72
RPRD2-204ENST00000492220 SPRR2AP35326 72 aa4.28□□□□□ -1.72
RPRD2-204ENST00000492220 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
RPRD2-204ENST00000492220 MT1GP13640 62 aa4.26□□□□□ -1.73
RPRD2-204ENST00000492220 HERC2O95714 4834 aa4.26□□□□□ -1.73
RPRD2-204ENST00000492220 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
RPRD2-204ENST00000492220 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
RPRD2-204ENST00000492220 LCE2BO14633 110 aa4.18□□□□□ -1.74
RPRD2-204ENST00000492220 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
RPRD2-204ENST00000492220 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
RPRD2-204ENST00000492220 SPRR2DP22532 72 aa4.16□□□□□ -1.74
RPRD2-204ENST00000492220 PCLOQ9Y6V0 5065 aa4.14□□□□□ -1.75
RPRD2-204ENST00000492220 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
RPRD2-204ENST00000492220 KMT2CQ8NEZ4 4911 aaKnown RBP4.11□□□□□ -1.75
RPRD2-204ENST00000492220 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
RPRD2-204ENST00000492220 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
RPRD2-204ENST00000492220 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.76
RPRD2-204ENST00000492220 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
RPRD2-204ENST00000492220 LRP2P98164 4655 aa4.06□□□□□ -1.76
RPRD2-204ENST00000492220 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
RPRD2-204ENST00000492220 MT1LQ93083 61 aa4.03□□□□□ -1.76
RPRD2-204ENST00000492220 TNXBP22105 4242 aa4.01□□□□□ -1.77
RPRD2-204ENST00000492220 EPPK1P58107 5090 aaKnown RBP4□□□□□ -1.77
RPRD2-204ENST00000492220 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
RPRD2-204ENST00000492220 MT1EP04732 61 aa3.97□□□□□ -1.77
RPRD2-204ENST00000492220 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
RPRD2-204ENST00000492220 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
RPRD2-204ENST00000492220 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
RPRD2-204ENST00000492220 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
RPRD2-204ENST00000492220 ABCA13Q86UQ4 5058 aa3.86□□□□□ -1.79
RPRD2-204ENST00000492220 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.8
RPRD2-204ENST00000492220 MT1MQ8N339 61 aa3.83□□□□□ -1.8
RPRD2-204ENST00000492220 FLGP20930 4061 aaPredicted RBP3.82□□□□□ -1.8
RPRD2-204ENST00000492220 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms