RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ALMS1Q8TCU4 4167 aa6.24□□□□□ -1.41
EPHB4-206ENST00000487222 DNAH5Q8TE73 4624 aa6.23□□□□□ -1.41
EPHB4-206ENST00000487222 DNAH9Q9NYC9 4486 aa6.22□□□□□ -1.41
EPHB4-206ENST00000487222 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
EPHB4-206ENST00000487222 CSMD3Q7Z407 3707 aa6.14□□□□□ -1.43
EPHB4-206ENST00000487222 PLECQ15149 4684 aaKnown RBP6.13□□□□□ -1.43
EPHB4-206ENST00000487222 ZNF469Q96JG9 3925 aaPredicted RBP6.1□□□□□ -1.43
EPHB4-206ENST00000487222 DNHD1Q96M86 4753 aa6.06□□□□□ -1.44
EPHB4-206ENST00000487222 DNAH1Q9P2D7 4330 aa6.05□□□□□ -1.44
EPHB4-206ENST00000487222 DNAH10Q8IVF4 4471 aa6.05□□□□□ -1.44
EPHB4-206ENST00000487222 DNAH11Q96DT5 4516 aa6.04□□□□□ -1.44
EPHB4-206ENST00000487222 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
EPHB4-206ENST00000487222 AKAP9Q99996 3911 aa5.98□□□□□ -1.45
EPHB4-206ENST00000487222 VPS13DQ5THJ4 4388 aa5.93□□□□□ -1.46
EPHB4-206ENST00000487222 DYNC1H1Q14204 4646 aaKnown RBP5.92□□□□□ -1.46
EPHB4-206ENST00000487222 DNAH17Q9UFH2 4485 aa5.92□□□□□ -1.46
EPHB4-206ENST00000487222 FAT1Q14517 4588 aa5.91□□□□□ -1.46
EPHB4-206ENST00000487222 MT1HP80294 61 aa5.89□□□□□ -1.47
EPHB4-206ENST00000487222 KRTAP8-1Q8IUC2 63 aa5.88□□□□□ -1.47
EPHB4-206ENST00000487222 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
EPHB4-206ENST00000487222 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
EPHB4-206ENST00000487222 RYR1P21817 5038 aa5.84□□□□□ -1.47
EPHB4-206ENST00000487222 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
EPHB4-206ENST00000487222 DNAH2Q9P225 4427 aa5.84□□□□□ -1.48
EPHB4-206ENST00000487222 MT2AP02795 61 aa5.84□□□□□ -1.48
EPHB4-206ENST00000487222 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
EPHB4-206ENST00000487222 DNAH8Q96JB1 4490 aa5.77□□□□□ -1.49
EPHB4-206ENST00000487222 SACSQ9NZJ4 4579 aa5.76□□□□□ -1.49
EPHB4-206ENST00000487222 MT1FP04733 61 aa5.71□□□□□ -1.5
EPHB4-206ENST00000487222 FAT2Q9NYQ8 4349 aa5.69□□□□□ -1.5
EPHB4-206ENST00000487222 DYNC2H1Q8NCM8 4307 aaKnown RBP5.69□□□□□ -1.5
EPHB4-206ENST00000487222 APOBP04114 4563 aaKnown RBP5.61□□□□□ -1.51
EPHB4-206ENST00000487222 PRKDCP78527 4128 aaKnown RBP5.61□□□□□ -1.51
EPHB4-206ENST00000487222 DNAH3Q8TD57 4116 aa5.6□□□□□ -1.51
EPHB4-206ENST00000487222 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
EPHB4-206ENST00000487222 KIAA1109Q2LD37 5005 aa5.58□□□□□ -1.52
EPHB4-206ENST00000487222 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
EPHB4-206ENST00000487222 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
EPHB4-206ENST00000487222 RYR3Q15413 4870 aa5.52□□□□□ -1.53
EPHB4-206ENST00000487222 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
EPHB4-206ENST00000487222 MYCBP2O75592 4640 aa5.49□□□□□ -1.53
EPHB4-206ENST00000487222 ANK2Q01484 3957 aa5.49□□□□□ -1.53
EPHB4-206ENST00000487222 VPS13BQ7Z7G8 4022 aa5.49□□□□□ -1.53
EPHB4-206ENST00000487222 KMT2AQ03164 3969 aa5.48□□□□□ -1.53
EPHB4-206ENST00000487222 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
EPHB4-206ENST00000487222 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
EPHB4-206ENST00000487222 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
EPHB4-206ENST00000487222 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
EPHB4-206ENST00000487222 LYSTQ99698 3801 aa5.42□□□□□ -1.54
EPHB4-206ENST00000487222 RYR2Q92736 4967 aa5.39□□□□□ -1.55
EPHB4-206ENST00000487222 FAT3Q8TDW7 4589 aa5.36□□□□□ -1.55
EPHB4-206ENST00000487222 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.56
EPHB4-206ENST00000487222 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
EPHB4-206ENST00000487222 MT1XP80297 61 aa5.27□□□□□ -1.57
EPHB4-206ENST00000487222 DNAH6Q9C0G6 4158 aa5.26□□□□□ -1.57
EPHB4-206ENST00000487222 HERC2O95714 4834 aa5.24□□□□□ -1.57
EPHB4-206ENST00000487222 MT1BP07438 61 aa5.24□□□□□ -1.57
EPHB4-206ENST00000487222 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
EPHB4-206ENST00000487222 CMYA5Q8N3K9 4069 aa5.21□□□□□ -1.58
EPHB4-206ENST00000487222 DNAH7Q8WXX0 4024 aa5.2□□□□□ -1.58
EPHB4-206ENST00000487222 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
EPHB4-206ENST00000487222 LRP2P98164 4655 aa5.14□□□□□ -1.59
EPHB4-206ENST00000487222 FRAS1Q86XX4 4008 aa5.13□□□□□ -1.59
EPHB4-206ENST00000487222 HECTD4Q9Y4D8 3996 aa5.12□□□□□ -1.59
EPHB4-206ENST00000487222 BIRC6Q9NR09 4857 aa5.12□□□□□ -1.59
EPHB4-206ENST00000487222 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
EPHB4-206ENST00000487222 PKD1P98161 4303 aa5.1□□□□□ -1.59
EPHB4-206ENST00000487222 PCLOQ9Y6V0 5065 aa5.09□□□□□ -1.59
EPHB4-206ENST00000487222 HERC1Q15751 4861 aa5.09□□□□□ -1.59
EPHB4-206ENST00000487222 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
EPHB4-206ENST00000487222 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
EPHB4-206ENST00000487222 SPRR2EP22531 72 aa5.07□□□□□ -1.6
EPHB4-206ENST00000487222 SPRR2BP35325 72 aa5.07□□□□□ -1.6
EPHB4-206ENST00000487222 SPRR2AP35326 72 aa5.07□□□□□ -1.6
EPHB4-206ENST00000487222 MT1GP13640 62 aa5.05□□□□□ -1.6
EPHB4-206ENST00000487222 HSPG2P98160 4391 aa5.04□□□□□ -1.6
EPHB4-206ENST00000487222 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
EPHB4-206ENST00000487222 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
EPHB4-206ENST00000487222 HYDINQ4G0P3 5121 aa5.02□□□□□ -1.61
EPHB4-206ENST00000487222 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
EPHB4-206ENST00000487222 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
EPHB4-206ENST00000487222 LCE2BO14633 110 aa4.92□□□□□ -1.62
EPHB4-206ENST00000487222 SPRR2DP22532 72 aa4.9□□□□□ -1.62
EPHB4-206ENST00000487222 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
EPHB4-206ENST00000487222 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
EPHB4-206ENST00000487222 EPPK1P58107 5090 aaKnown RBP4.83□□□□□ -1.64
EPHB4-206ENST00000487222 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
EPHB4-206ENST00000487222 LPAP08519 4548 aa4.83□□□□□ -1.64
EPHB4-206ENST00000487222 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
EPHB4-206ENST00000487222 MUC17Q685J3 4493 aa4.8□□□□□ -1.64
EPHB4-206ENST00000487222 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
EPHB4-206ENST00000487222 MT1LQ93083 61 aa4.8□□□□□ -1.64
EPHB4-206ENST00000487222 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
EPHB4-206ENST00000487222 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
EPHB4-206ENST00000487222 MT1EP04732 61 aa4.75□□□□□ -1.65
EPHB4-206ENST00000487222 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
EPHB4-206ENST00000487222 TNXBP22105 4242 aa4.66□□□□□ -1.66
EPHB4-206ENST00000487222 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
EPHB4-206ENST00000487222 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
EPHB4-206ENST00000487222 MT1MQ8N339 61 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms