RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 DPM2O94777 84 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 PAEPP09466 180 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 G0S2P27469 103 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 POLR2JP52435 117 aaKnown RBP-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 GNG3P63215 75 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 PSPHP78330 225 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 SPANXN1Q5VSR9 72 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 S100A7AQ86SG5 101 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 S100ZQ8WXG8 99 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 LSM10Q969L4 123 aaKnown RBP-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 CEP19Q96LK0 163 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 DPY30Q9C005 99 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 RERGLQ9H628 205 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 ST20Q9HBF5 79 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 SPANXCQ9NY87 97 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 ARL2BPQ9Y2Y0 163 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 LENEPQ9Y5L5 61 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 DNAJC15Q9Y5T4 150 aa-0.67□□□□□ -2.52
CCDC66-219ENST00000484441 MYMXA0A1B0GTQ4 84 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 A0A1B0GUT8 65 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 LOC285095A0A1B0GVY8 99 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 PVALEFA0A1B0GWK0 134 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 IGIPA6NJ69 53 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 MIF4GDA9UHW6 222 aaKnown RBP-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 UMAD1C9J7I0 102 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 K7EMI3 77 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 TMEM256-PLSCR3K7ERE1 68 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 CORTO00230 105 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 PDE6DO43924 150 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 CYB5AP00167 134 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 SERPINB1P30740 379 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 SNRPGP62308 76 aaKnown RBP-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 TMEM35BQ8NCS4 154 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 PRAP1Q96NZ9 151 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 LYRM2Q9NU23 88 aaPredicted RBP-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 HSPB11Q9Y547 144 aa-0.68□□□□□ -2.52
CCDC66-219ENST00000484441 H0YGX0 51 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 NBEAP1P0C6P0 100 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 S100GP29377 79 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 PPP1R2P41236 205 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 KRTDAPP60985 99 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 COPZ1P61923 177 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 GNG5P63218 68 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 HMGN3Q15651 99 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 PPP1R2P3Q6NXS1 205 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 SPTSSAQ969W0 71 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 BORCS7Q96B45 105 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 VAMP8Q9BV40 100 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 ENY2Q9NPA8 101 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 SAR1AQ9NR31 198 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 CALML5Q9NZT1 146 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 TPRKBQ9Y3C4 175 aa-0.69□□□□□ -2.52
CCDC66-219ENST00000484441 CCDC179H3BU77 68 aa-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 GABARAPH6UMI1 98 aa-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 HIST1H2BKO60814 126 aa-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 RPP14O95059 124 aaKnown RBP-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 CKS2P33552 79 aa-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 CATR1Q13166 79 aa-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 SKA2Q8WVK7 121 aaPredicted RBP-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 ANP32BQ92688 251 aaKnown RBP-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 TSC22D3Q99576 134 aa-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 SMIM7Q9BQ49 75 aa-0.7□□□□□ -2.52
CCDC66-219ENST00000484441 MAP1LC3B2A6NCE7 125 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 HIST1H2BJP06899 126 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 COX6CP09669 75 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 PLNP26678 52 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 RPS25P62851 125 aaKnown RBP-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 MYL5Q02045 173 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 PEA15Q15121 130 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 SMIM15Q7Z3B0 74 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 COPS9Q8WXC6 57 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 CCDC42Q96M95 316 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 PFDN5Q99471 154 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 GID8Q9NWU2 228 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 UQCR10Q9UDW1 63 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 MED31Q9Y3C7 131 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 FAM32AQ9Y421 112 aaKnown RBP-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 V9GYS6 101 aa-0.71□□□□□ -2.52
CCDC66-219ENST00000484441 CEBPZOSA8MTT3 80 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 C5orf58C9J3I9 102 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 MT-ND4LP03901 98 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 DBIP07108 87 aaKnown RBP-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 CTXN2P0C2S0 81 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 RPL22P35268 128 aaKnown RBP-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 ARPC4P59998 168 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 SERF2P84101 59 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 LIN52Q52LA3 116 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 LINC01545Q5VT33 79 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 PMCHL2Q9BQD1 86 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 AIF1LQ9BQI0 150 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 MAP1LC3BQ9GZQ8 125 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 PRO1854Q9UHT4 67 aa-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 PAIP2BQ9ULR5 123 aaKnown RBP-0.72□□□□□ -2.52
CCDC66-219ENST00000484441 LINC01549A6NIU2 74 aa-0.73□□□□□ -2.53
CCDC66-219ENST00000484441 M0R129 80 aa-0.73□□□□□ -2.53
CCDC66-219ENST00000484441 NDUFB6O95139 128 aa-0.73□□□□□ -2.53
CCDC66-219ENST00000484441 TPM3P06753 285 aa-0.73□□□□□ -2.53
CCDC66-219ENST00000484441 PMCHL1Q16048 86 aa-0.73□□□□□ -2.53
CCDC66-219ENST00000484441 ETDBQ3ZM63 59 aa-0.73□□□□□ -2.53
CCDC66-219ENST00000484441 CHMP6Q96FZ7 201 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms