RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 ANAPC11Q9NYG5 84 aa2.62□□□□□ -1.99
SSBP1-211ENST00000484178 F8P00451 2351 aa2.61□□□□□ -1.99
SSBP1-211ENST00000484178 KRTAP13-2Q52LG2 175 aa2.6□□□□□ -1.99
SSBP1-211ENST00000484178 ANK2Q01484 3957 aa2.6□□□□□ -1.99
SSBP1-211ENST00000484178 NBEAL1Q6ZS30 2694 aa2.6□□□□□ -1.99
SSBP1-211ENST00000484178 TENM2Q9NT68 2774 aa2.6□□□□□ -1.99
SSBP1-211ENST00000484178 FBN1P35555 2871 aaKnown RBP2.59□□□□□ -1.99
SSBP1-211ENST00000484178 CMYA5Q8N3K9 4069 aa2.59□□□□□ -1.99
SSBP1-211ENST00000484178 STAB2Q8WWQ8 2551 aa2.59□□□□□ -1.99
SSBP1-211ENST00000484178 STAB1Q9NY15 2570 aa2.59□□□□□ -1.99
SSBP1-211ENST00000484178 A8MUU9 505 aa2.58□□□□□ -2
SSBP1-211ENST00000484178 LINC00304Q8N9R0 145 aa2.58□□□□□ -2
SSBP1-211ENST00000484178 C20orf166-AS1Q96NR2 134 aa2.58□□□□□ -2
SSBP1-211ENST00000484178 NOTCH1P46531 2555 aa2.58□□□□□ -2
SSBP1-211ENST00000484178 VPS13DQ5THJ4 4388 aa2.58□□□□□ -2
SSBP1-211ENST00000484178 A0A1B0GU33 70 aa2.57□□□□□ -2
SSBP1-211ENST00000484178 KRTAP5-8O75690 187 aa2.57□□□□□ -2
SSBP1-211ENST00000484178 COX6B2Q6YFQ2 88 aa2.57□□□□□ -2
SSBP1-211ENST00000484178 ALMS1Q8TCU4 4167 aa2.57□□□□□ -2
SSBP1-211ENST00000484178 DNAH10Q8IVF4 4471 aa2.57□□□□□ -2
SSBP1-211ENST00000484178 SRRM2Q9UQ35 2752 aaKnown RBP2.56□□□□□ -2
SSBP1-211ENST00000484178 DNAH9Q9NYC9 4486 aa2.56□□□□□ -2
SSBP1-211ENST00000484178 MGAM2Q2M2H8 2515 aa2.55□□□□□ -2
SSBP1-211ENST00000484178 H1FX-AS1Q4G0G2 97 aa2.55□□□□□ -2
SSBP1-211ENST00000484178 ADM2Q7Z4H4 148 aa2.55□□□□□ -2
SSBP1-211ENST00000484178 DNAH17Q9UFH2 4485 aa2.55□□□□□ -2
SSBP1-211ENST00000484178 COL6A5A8TX70 2615 aa2.54□□□□□ -2
SSBP1-211ENST00000484178 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
SSBP1-211ENST00000484178 CSAG1Q6PB30 78 aa2.53□□□□□ -2
SSBP1-211ENST00000484178 DNAH6Q9C0G6 4158 aa2.52□□□□□ -2.01
SSBP1-211ENST00000484178 DNAH8Q96JB1 4490 aa2.52□□□□□ -2.01
SSBP1-211ENST00000484178 H0YAA0 97 aa2.51□□□□□ -2.01
SSBP1-211ENST00000484178 PLECQ15149 4684 aaKnown RBP2.51□□□□□ -2.01
SSBP1-211ENST00000484178 LYSTQ99698 3801 aa2.5□□□□□ -2.01
SSBP1-211ENST00000484178 PRKDCP78527 4128 aaKnown RBP2.5□□□□□ -2.01
SSBP1-211ENST00000484178 COL7A1Q02388 2944 aa2.49□□□□□ -2.01
SSBP1-211ENST00000484178 HECTD4Q9Y4D8 3996 aa2.49□□□□□ -2.01
SSBP1-211ENST00000484178 DNAH2Q9P225 4427 aa2.48□□□□□ -2.01
SSBP1-211ENST00000484178 ROMO1P60602 79 aa2.48□□□□□ -2.01
SSBP1-211ENST00000484178 RPL37P61927 97 aaKnown RBP2.48□□□□□ -2.01
SSBP1-211ENST00000484178 DNAH7Q8WXX0 4024 aa2.48□□□□□ -2.01
SSBP1-211ENST00000484178 KRTAP21-3Q3LHN1 58 aa2.47□□□□□ -2.01
SSBP1-211ENST00000484178 MEGF8Q7Z7M0 2845 aa2.47□□□□□ -2.01
SSBP1-211ENST00000484178 STARD9Q9P2P6 4700 aa2.43□□□□□ -2.02
SSBP1-211ENST00000484178 SPINT4Q6UDR6 99 aa2.43□□□□□ -2.02
SSBP1-211ENST00000484178 CSMD3Q7Z407 3707 aa2.43□□□□□ -2.02
SSBP1-211ENST00000484178 DNAH11Q96DT5 4516 aa2.43□□□□□ -2.02
SSBP1-211ENST00000484178 C9orf92A6NGG3 77 aa2.42□□□□□ -2.02
SSBP1-211ENST00000484178 M0QZ58 72 aa2.42□□□□□ -2.02
SSBP1-211ENST00000484178 S4R3F8 94 aa2.42□□□□□ -2.02
SSBP1-211ENST00000484178 TGP01266 2768 aa2.42□□□□□ -2.02
SSBP1-211ENST00000484178 FBN3Q75N90 2809 aa2.41□□□□□ -2.02
SSBP1-211ENST00000484178 CRIPTQ9P021 101 aa2.41□□□□□ -2.02
SSBP1-211ENST00000484178 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
SSBP1-211ENST00000484178 FRAS1Q86XX4 4008 aa2.4□□□□□ -2.03
SSBP1-211ENST00000484178 SACSQ9NZJ4 4579 aa2.39□□□□□ -2.03
SSBP1-211ENST00000484178 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
SSBP1-211ENST00000484178 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
SSBP1-211ENST00000484178 DNAH5Q8TE73 4624 aa2.39□□□□□ -2.03
SSBP1-211ENST00000484178 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
SSBP1-211ENST00000484178 R4GN34 69 aa2.37□□□□□ -2.03
SSBP1-211ENST00000484178 KMT2AQ03164 3969 aa2.35□□□□□ -2.03
SSBP1-211ENST00000484178 PKD1P98161 4303 aa2.35□□□□□ -2.03
SSBP1-211ENST00000484178 VPS13BQ7Z7G8 4022 aa2.34□□□□□ -2.03
SSBP1-211ENST00000484178 FAT2Q9NYQ8 4349 aa2.33□□□□□ -2.04
SSBP1-211ENST00000484178 PKHD1L1Q86WI1 4243 aa2.33□□□□□ -2.04
SSBP1-211ENST00000484178 SMR3BP02814 79 aaPredicted RBP2.33□□□□□ -2.04
SSBP1-211ENST00000484178 TPRXLQ17RH7 258 aa2.32□□□□□ -2.04
SSBP1-211ENST00000484178 A0A0D9SG42 100 aa2.3□□□□□ -2.04
SSBP1-211ENST00000484178 PKHD1P08F94 4074 aa2.29□□□□□ -2.04
SSBP1-211ENST00000484178 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
SSBP1-211ENST00000484178 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
SSBP1-211ENST00000484178 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
SSBP1-211ENST00000484178 DYNC1H1Q14204 4646 aaKnown RBP2.28□□□□□ -2.04
SSBP1-211ENST00000484178 P0C880 135 aa2.28□□□□□ -2.04
SSBP1-211ENST00000484178 Q5VSD8 79 aa2.28□□□□□ -2.04
SSBP1-211ENST00000484178 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
SSBP1-211ENST00000484178 FLG2Q5D862 2391 aaPredicted RBP2.27□□□□□ -2.05
SSBP1-211ENST00000484178 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
SSBP1-211ENST00000484178 TNXBP22105 4242 aa2.24□□□□□ -2.05
SSBP1-211ENST00000484178 FAT3Q8TDW7 4589 aa2.22□□□□□ -2.05
SSBP1-211ENST00000484178 DNHD1Q96M86 4753 aa2.22□□□□□ -2.05
SSBP1-211ENST00000484178 DMBT1Q9UGM3 2413 aaPredicted RBP2.21□□□□□ -2.06
SSBP1-211ENST00000484178 MT1HL1P0DM35 61 aa2.21□□□□□ -2.06
SSBP1-211ENST00000484178 FAT1Q14517 4588 aa2.21□□□□□ -2.06
SSBP1-211ENST00000484178 HSPG2P98160 4391 aa2.2□□□□□ -2.06
SSBP1-211ENST00000484178 PLAC4Q8WY50 150 aa2.2□□□□□ -2.06
SSBP1-211ENST00000484178 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
SSBP1-211ENST00000484178 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
SSBP1-211ENST00000484178 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
SSBP1-211ENST00000484178 PRO2289Q9P1D8 64 aa2.18□□□□□ -2.06
SSBP1-211ENST00000484178 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
SSBP1-211ENST00000484178 KRTAP10-10P60014 251 aa2.14□□□□□ -2.07
SSBP1-211ENST00000484178 RYR2Q92736 4967 aa2.14□□□□□ -2.07
SSBP1-211ENST00000484178 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
SSBP1-211ENST00000484178 TNP1P09430 55 aa2.13□□□□□ -2.07
SSBP1-211ENST00000484178 RYR1P21817 5038 aa2.11□□□□□ -2.07
SSBP1-211ENST00000484178 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
SSBP1-211ENST00000484178 RYR3Q15413 4870 aa2.02□□□□□ -2.09
SSBP1-211ENST00000484178 SPRR2GQ9BYE4 73 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms