RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 PCOTHQ58A44 107 aa2.82□□□□□ -1.96
CHCHD3-205ENST00000481152 SPAG11AQ6PDA7 123 aa2.82□□□□□ -1.96
CHCHD3-205ENST00000481152 SPTSSBQ8NFR3 76 aa2.82□□□□□ -1.96
CHCHD3-205ENST00000481152 DMAC1Q96GE9 116 aa2.82□□□□□ -1.96
CHCHD3-205ENST00000481152 ALMS1Q8TCU4 4167 aa2.82□□□□□ -1.96
CHCHD3-205ENST00000481152 NOTCH1P46531 2555 aa2.81□□□□□ -1.96
CHCHD3-205ENST00000481152 DNAH10Q8IVF4 4471 aa2.81□□□□□ -1.96
CHCHD3-205ENST00000481152 DNAH9Q9NYC9 4486 aa2.81□□□□□ -1.96
CHCHD3-205ENST00000481152 P0C880 135 aa2.81□□□□□ -1.96
CHCHD3-205ENST00000481152 SSBP3-AS1Q7Z2R9 100 aa2.81□□□□□ -1.96
CHCHD3-205ENST00000481152 LYSTQ99698 3801 aa2.81□□□□□ -1.96
CHCHD3-205ENST00000481152 STAB2Q8WWQ8 2551 aa2.81□□□□□ -1.96
CHCHD3-205ENST00000481152 NUPR2A6NF83 97 aa2.8□□□□□ -1.96
CHCHD3-205ENST00000481152 PRB2P02812 416 aaPredicted RBP2.8□□□□□ -1.96
CHCHD3-205ENST00000481152 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
CHCHD3-205ENST00000481152 SPINK7P58062 85 aa2.79□□□□□ -1.96
CHCHD3-205ENST00000481152 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
CHCHD3-205ENST00000481152 TGP01266 2768 aa2.78□□□□□ -1.96
CHCHD3-205ENST00000481152 PSORS1C2Q9UIG4 136 aa2.78□□□□□ -1.96
CHCHD3-205ENST00000481152 A0A087WTM6 91 aa2.77□□□□□ -1.97
CHCHD3-205ENST00000481152 COL7A1Q02388 2944 aa2.76□□□□□ -1.97
CHCHD3-205ENST00000481152 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
CHCHD3-205ENST00000481152 VPS13DQ5THJ4 4388 aa2.76□□□□□ -1.97
CHCHD3-205ENST00000481152 HECTD4Q9Y4D8 3996 aa2.75□□□□□ -1.97
CHCHD3-205ENST00000481152 DNAH17Q9UFH2 4485 aa2.75□□□□□ -1.97
CHCHD3-205ENST00000481152 PLECQ15149 4684 aaKnown RBP2.75□□□□□ -1.97
CHCHD3-205ENST00000481152 A0A1B0GU69 56 aa2.74□□□□□ -1.97
CHCHD3-205ENST00000481152 UQCR11O14957 56 aa2.74□□□□□ -1.97
CHCHD3-205ENST00000481152 DNAH8Q96JB1 4490 aa2.74□□□□□ -1.97
CHCHD3-205ENST00000481152 MGAM2Q2M2H8 2515 aa2.73□□□□□ -1.97
CHCHD3-205ENST00000481152 MEGF8Q7Z7M0 2845 aa2.72□□□□□ -1.97
CHCHD3-205ENST00000481152 CSMD3Q7Z407 3707 aa2.72□□□□□ -1.97
CHCHD3-205ENST00000481152 DNAH7Q8WXX0 4024 aa2.71□□□□□ -1.98
CHCHD3-205ENST00000481152 SPINK6Q6UWN8 80 aa2.71□□□□□ -1.98
CHCHD3-205ENST00000481152 RPS29P62273 56 aaKnown RBP2.7□□□□□ -1.98
CHCHD3-205ENST00000481152 PRKDCP78527 4128 aaKnown RBP2.7□□□□□ -1.98
CHCHD3-205ENST00000481152 DNAH6Q9C0G6 4158 aa2.69□□□□□ -1.98
CHCHD3-205ENST00000481152 CSAG1Q6PB30 78 aa2.69□□□□□ -1.98
CHCHD3-205ENST00000481152 LY6G6CO95867 125 aa2.68□□□□□ -1.98
CHCHD3-205ENST00000481152 Q6ZSA8 131 aa2.68□□□□□ -1.98
CHCHD3-205ENST00000481152 DNAH2Q9P225 4427 aa2.68□□□□□ -1.98
CHCHD3-205ENST00000481152 KRTAP13-2Q52LG2 175 aa2.67□□□□□ -1.98
CHCHD3-205ENST00000481152 STARD9Q9P2P6 4700 aa2.67□□□□□ -1.98
CHCHD3-205ENST00000481152 SPINK1P00995 79 aa2.66□□□□□ -1.98
CHCHD3-205ENST00000481152 FRAS1Q86XX4 4008 aa2.66□□□□□ -1.98
CHCHD3-205ENST00000481152 TPRXLQ17RH7 258 aa2.65□□□□□ -1.98
CHCHD3-205ENST00000481152 KRTAP10-1P60331 282 aa2.64□□□□□ -1.99
CHCHD3-205ENST00000481152 DNAH11Q96DT5 4516 aa2.63□□□□□ -1.99
CHCHD3-205ENST00000481152 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CHCHD3-205ENST00000481152 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
CHCHD3-205ENST00000481152 KMT2CQ8NEZ4 4911 aaKnown RBP2.63□□□□□ -1.99
CHCHD3-205ENST00000481152 DNAH5Q8TE73 4624 aa2.62□□□□□ -1.99
CHCHD3-205ENST00000481152 RYR3Q15413 4870 aa2.62□□□□□ -1.99
CHCHD3-205ENST00000481152 KMT2AQ03164 3969 aa2.6□□□□□ -1.99
CHCHD3-205ENST00000481152 H0YAA0 97 aa2.59□□□□□ -2
CHCHD3-205ENST00000481152 LCE3DQ9BYE3 92 aa2.59□□□□□ -2
CHCHD3-205ENST00000481152 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
CHCHD3-205ENST00000481152 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
CHCHD3-205ENST00000481152 LINC00304Q8N9R0 145 aa2.58□□□□□ -2
CHCHD3-205ENST00000481152 LRP1BQ9NZR2 4599 aa2.57□□□□□ -2
CHCHD3-205ENST00000481152 PKD1P98161 4303 aa2.57□□□□□ -2
CHCHD3-205ENST00000481152 VPS13BQ7Z7G8 4022 aa2.55□□□□□ -2
CHCHD3-205ENST00000481152 BIRC6Q9NR09 4857 aa2.55□□□□□ -2
CHCHD3-205ENST00000481152 COX6B2Q6YFQ2 88 aa2.54□□□□□ -2
CHCHD3-205ENST00000481152 EPPK1P58107 5090 aaKnown RBP2.52□□□□□ -2.01
CHCHD3-205ENST00000481152 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
CHCHD3-205ENST00000481152 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
CHCHD3-205ENST00000481152 PCLOQ9Y6V0 5065 aa2.51□□□□□ -2.01
CHCHD3-205ENST00000481152 PKHD1L1Q86WI1 4243 aa2.51□□□□□ -2.01
CHCHD3-205ENST00000481152 RPL37P61927 97 aaKnown RBP2.49□□□□□ -2.01
CHCHD3-205ENST00000481152 APOBP04114 4563 aaKnown RBP2.48□□□□□ -2.01
CHCHD3-205ENST00000481152 PKHD1P08F94 4074 aa2.48□□□□□ -2.01
CHCHD3-205ENST00000481152 KRTAP10-4P60372 401 aaPredicted RBP2.48□□□□□ -2.01
CHCHD3-205ENST00000481152 HYDINQ4G0P3 5121 aa2.47□□□□□ -2.01
CHCHD3-205ENST00000481152 RYR1P21817 5038 aa2.46□□□□□ -2.02
CHCHD3-205ENST00000481152 FLG2Q5D862 2391 aaPredicted RBP2.45□□□□□ -2.02
CHCHD3-205ENST00000481152 C9orf92A6NGG3 77 aa2.45□□□□□ -2.02
CHCHD3-205ENST00000481152 INE1O15225 51 aa2.44□□□□□ -2.02
CHCHD3-205ENST00000481152 DYNC1H1Q14204 4646 aaKnown RBP2.43□□□□□ -2.02
CHCHD3-205ENST00000481152 HERC2O95714 4834 aa2.43□□□□□ -2.02
CHCHD3-205ENST00000481152 S4R3F8 94 aa2.41□□□□□ -2.02
CHCHD3-205ENST00000481152 TNXBP22105 4242 aa2.41□□□□□ -2.02
CHCHD3-205ENST00000481152 RYR2Q92736 4967 aa2.41□□□□□ -2.02
CHCHD3-205ENST00000481152 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.02
CHCHD3-205ENST00000481152 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.03
CHCHD3-205ENST00000481152 FAT1Q14517 4588 aa2.39□□□□□ -2.03
CHCHD3-205ENST00000481152 M0QZ58 72 aa2.39□□□□□ -2.03
CHCHD3-205ENST00000481152 LRP1Q07954 4544 aaKnown RBP2.39□□□□□ -2.03
CHCHD3-205ENST00000481152 DMBT1Q9UGM3 2413 aaPredicted RBP2.38□□□□□ -2.03
CHCHD3-205ENST00000481152 CRIPTQ9P021 101 aa2.38□□□□□ -2.03
CHCHD3-205ENST00000481152 HSPG2P98160 4391 aa2.37□□□□□ -2.03
CHCHD3-205ENST00000481152 SMR3BP02814 79 aaPredicted RBP2.36□□□□□ -2.03
CHCHD3-205ENST00000481152 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
CHCHD3-205ENST00000481152 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
CHCHD3-205ENST00000481152 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
CHCHD3-205ENST00000481152 A0A0D9SG42 100 aa2.34□□□□□ -2.04
CHCHD3-205ENST00000481152 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
CHCHD3-205ENST00000481152 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
CHCHD3-205ENST00000481152 HERC1Q15751 4861 aa2.29□□□□□ -2.04
CHCHD3-205ENST00000481152 KIAA1109Q2LD37 5005 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms