RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
LSM5-210ENST00000480956 PLECQ15149 4684 aaKnown RBP3.28□□□□□ -1.88
LSM5-210ENST00000480956 M0QY20 66 aa3.28□□□□□ -1.88
LSM5-210ENST00000480956 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.89
LSM5-210ENST00000480956 NDUFA1O15239 70 aa3.27□□□□□ -1.89
LSM5-210ENST00000480956 SPART-AS1P0CW21 52 aa3.27□□□□□ -1.89
LSM5-210ENST00000480956 TENM2Q9NT68 2774 aa3.26□□□□□ -1.89
LSM5-210ENST00000480956 DEFB131BA0A096LNP1 70 aa3.26□□□□□ -1.89
LSM5-210ENST00000480956 KRTAP13-1Q8IUC0 172 aa3.26□□□□□ -1.89
LSM5-210ENST00000480956 LINC00308Q8TCZ7 52 aa3.25□□□□□ -1.89
LSM5-210ENST00000480956 CLPSL2Q6UWE3 100 aa3.24□□□□□ -1.89
LSM5-210ENST00000480956 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
LSM5-210ENST00000480956 PRO0255Q9UI72 69 aa3.24□□□□□ -1.89
LSM5-210ENST00000480956 DNAH10Q8IVF4 4471 aa3.22□□□□□ -1.89
LSM5-210ENST00000480956 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
LSM5-210ENST00000480956 WFDC10BQ8IUB3 73 aa3.22□□□□□ -1.89
LSM5-210ENST00000480956 CDKN2A-AS1Q9UH64 79 aa3.22□□□□□ -1.89
LSM5-210ENST00000480956 DYNC2H1Q8NCM8 4307 aaKnown RBP3.21□□□□□ -1.89
LSM5-210ENST00000480956 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
LSM5-210ENST00000480956 ANGP03950 147 aaKnown RBP3.19□□□□□ -1.9
LSM5-210ENST00000480956 COX6A2Q02221 97 aa3.19□□□□□ -1.9
LSM5-210ENST00000480956 CRIPTQ9P021 101 aa3.18□□□□□ -1.9
LSM5-210ENST00000480956 KMT2AQ03164 3969 aa3.17□□□□□ -1.9
LSM5-210ENST00000480956 H0YGX0 51 aa3.17□□□□□ -1.9
LSM5-210ENST00000480956 TP53AIP1Q9HCN2 124 aa3.17□□□□□ -1.9
LSM5-210ENST00000480956 APLNQ9ULZ1 77 aa3.17□□□□□ -1.9
LSM5-210ENST00000480956 LELP1Q5T871 98 aa3.16□□□□□ -1.9
LSM5-210ENST00000480956 DNAH2Q9P225 4427 aa3.16□□□□□ -1.9
LSM5-210ENST00000480956 VPS13DQ5THJ4 4388 aa3.16□□□□□ -1.9
LSM5-210ENST00000480956 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
LSM5-210ENST00000480956 KMT2CQ8NEZ4 4911 aaKnown RBP3.15□□□□□ -1.9
LSM5-210ENST00000480956 H3BNG1 76 aa3.15□□□□□ -1.91
LSM5-210ENST00000480956 KCNQ1DNQ9H478 68 aa3.15□□□□□ -1.91
LSM5-210ENST00000480956 SACSQ9NZJ4 4579 aa3.15□□□□□ -1.91
LSM5-210ENST00000480956 ALMS1Q8TCU4 4167 aa3.14□□□□□ -1.91
LSM5-210ENST00000480956 TOMM7Q9P0U1 55 aa3.13□□□□□ -1.91
LSM5-210ENST00000480956 RYR3Q15413 4870 aa3.12□□□□□ -1.91
LSM5-210ENST00000480956 RYR2Q92736 4967 aa3.12□□□□□ -1.91
LSM5-210ENST00000480956 FRAS1Q86XX4 4008 aa3.12□□□□□ -1.91
LSM5-210ENST00000480956 LINC01556Q5JQF7 62 aa3.11□□□□□ -1.91
LSM5-210ENST00000480956 ETDCA0A1B0GVM5 59 aa3.09□□□□□ -1.91
LSM5-210ENST00000480956 LINC00158P58513 81 aa3.09□□□□□ -1.91
LSM5-210ENST00000480956 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
LSM5-210ENST00000480956 Q6ZSA8 131 aa3.08□□□□□ -1.92
LSM5-210ENST00000480956 DNAH17Q9UFH2 4485 aa3.08□□□□□ -1.92
LSM5-210ENST00000480956 DNAH5Q8TE73 4624 aa3.07□□□□□ -1.92
LSM5-210ENST00000480956 DNAH6Q9C0G6 4158 aa3.07□□□□□ -1.92
LSM5-210ENST00000480956 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
LSM5-210ENST00000480956 K7EQZ3 153 aa3.06□□□□□ -1.92
LSM5-210ENST00000480956 Q8IZM0 81 aa3.06□□□□□ -1.92
LSM5-210ENST00000480956 DNAH11Q96DT5 4516 aa3.06□□□□□ -1.92
LSM5-210ENST00000480956 HECTD4Q9Y4D8 3996 aa3.06□□□□□ -1.92
LSM5-210ENST00000480956 PKD1P98161 4303 aa3.05□□□□□ -1.92
LSM5-210ENST00000480956 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
LSM5-210ENST00000480956 C6orf48Q9UBA6 75 aa3.05□□□□□ -1.92
LSM5-210ENST00000480956 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
LSM5-210ENST00000480956 PKHD1P08F94 4074 aa3.03□□□□□ -1.92
LSM5-210ENST00000480956 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
LSM5-210ENST00000480956 DNAH8Q96JB1 4490 aa3.01□□□□□ -1.93
LSM5-210ENST00000480956 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
LSM5-210ENST00000480956 MRPL34Q9BQ48 92 aaKnown RBP3.01□□□□□ -1.93
LSM5-210ENST00000480956 DYNC1H1Q14204 4646 aaKnown RBP3.01□□□□□ -1.93
LSM5-210ENST00000480956 A0A096LNI7 61 aa3□□□□□ -1.93
LSM5-210ENST00000480956 LRP1BQ9NZR2 4599 aa2.98□□□□□ -1.93
LSM5-210ENST00000480956 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
LSM5-210ENST00000480956 APOBP04114 4563 aaKnown RBP2.96□□□□□ -1.94
LSM5-210ENST00000480956 IGLV5-48A0A075B6I7 105 aa2.95□□□□□ -1.94
LSM5-210ENST00000480956 FAT1Q14517 4588 aa2.93□□□□□ -1.94
LSM5-210ENST00000480956 COX6B2Q6YFQ2 88 aa2.93□□□□□ -1.94
LSM5-210ENST00000480956 SRRM2Q9UQ35 2752 aaKnown RBP2.92□□□□□ -1.94
LSM5-210ENST00000480956 KIAA1109Q2LD37 5005 aa2.92□□□□□ -1.94
LSM5-210ENST00000480956 SMR3BP02814 79 aaPredicted RBP2.92□□□□□ -1.94
LSM5-210ENST00000480956 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
LSM5-210ENST00000480956 PRLHP81277 87 aa2.91□□□□□ -1.94
LSM5-210ENST00000480956 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
LSM5-210ENST00000480956 RYR1P21817 5038 aa2.9□□□□□ -1.95
LSM5-210ENST00000480956 A0A0D9SG42 100 aa2.89□□□□□ -1.95
LSM5-210ENST00000480956 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
LSM5-210ENST00000480956 VPS13BQ7Z7G8 4022 aa2.89□□□□□ -1.95
LSM5-210ENST00000480956 HSPG2P98160 4391 aa2.88□□□□□ -1.95
LSM5-210ENST00000480956 DEFB105AQ8NG35 78 aa2.88□□□□□ -1.95
LSM5-210ENST00000480956 SPRR1AP35321 89 aa2.87□□□□□ -1.95
LSM5-210ENST00000480956 BIRC6Q9NR09 4857 aa2.86□□□□□ -1.95
LSM5-210ENST00000480956 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.96
LSM5-210ENST00000480956 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
LSM5-210ENST00000480956 MYCBP2O75592 4640 aa2.82□□□□□ -1.96
LSM5-210ENST00000480956 Q5VSD8 79 aa2.82□□□□□ -1.96
LSM5-210ENST00000480956 HERC2O95714 4834 aa2.8□□□□□ -1.96
LSM5-210ENST00000480956 WFDC13Q8IUB5 93 aa2.8□□□□□ -1.96
LSM5-210ENST00000480956 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
LSM5-210ENST00000480956 MMP24-AS1A0A0U1RRL7 71 aa2.79□□□□□ -1.96
LSM5-210ENST00000480956 KRTAP10-4P60372 401 aaPredicted RBP2.79□□□□□ -1.96
LSM5-210ENST00000480956 FAT3Q8TDW7 4589 aa2.78□□□□□ -1.96
LSM5-210ENST00000480956 SPRR1BP22528 89 aa2.77□□□□□ -1.97
LSM5-210ENST00000480956 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
LSM5-210ENST00000480956 SPINK6Q6UWN8 80 aa2.74□□□□□ -1.97
LSM5-210ENST00000480956 TNXBP22105 4242 aa2.73□□□□□ -1.97
LSM5-210ENST00000480956 H1FX-AS1Q4G0G2 97 aa2.71□□□□□ -1.98
LSM5-210ENST00000480956 H0YAA0 97 aa2.71□□□□□ -1.98
LSM5-210ENST00000480956 HERC1Q15751 4861 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms