RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 RALGAPBQ86X10 1494 aa-2.71□□□□□ -2.84
NCKAP1-204ENST00000477988 CLASP1Q7Z460 1538 aa-2.72□□□□□ -2.84
NCKAP1-204ENST00000477988 FAM208AQ9UK61 1670 aaKnown RBP-2.72□□□□□ -2.84
NCKAP1-204ENST00000477988 S100A10P60903 97 aa-2.72□□□□□ -2.84
NCKAP1-204ENST00000477988 S100A12P80511 92 aa-2.72□□□□□ -2.84
NCKAP1-204ENST00000477988 SARNPP82979 210 aaKnown RBP-2.72□□□□□ -2.84
NCKAP1-204ENST00000477988 PREX2Q70Z35 1606 aa-2.72□□□□□ -2.85
NCKAP1-204ENST00000477988 C2orf88Q9BSF0 95 aa-2.73□□□□□ -2.85
NCKAP1-204ENST00000477988 UBL5Q9BZL1 73 aa-2.73□□□□□ -2.85
NCKAP1-204ENST00000477988 DPY30Q9C005 99 aa-2.73□□□□□ -2.85
NCKAP1-204ENST00000477988 DIP2AQ14689 1571 aa-2.74□□□□□ -2.85
NCKAP1-204ENST00000477988 MROH1Q8NDA8 1641 aa-2.75□□□□□ -2.85
NCKAP1-204ENST00000477988 C20orf202A1L168 122 aa-2.75□□□□□ -2.85
NCKAP1-204ENST00000477988 HMGN1P05114 100 aa-2.75□□□□□ -2.85
NCKAP1-204ENST00000477988 TTTY10Q9BZA0 68 aa-2.75□□□□□ -2.85
NCKAP1-204ENST00000477988 KDM5DQ9BY66 1539 aa-2.75□□□□□ -2.85
NCKAP1-204ENST00000477988 TTC37Q6PGP7 1564 aa-2.75□□□□□ -2.85
NCKAP1-204ENST00000477988 C3P01024 1663 aa-2.76□□□□□ -2.85
NCKAP1-204ENST00000477988 GYPAP02724 150 aa-2.77□□□□□ -2.85
NCKAP1-204ENST00000477988 HMGA1P17096 107 aaKnown RBP-2.77□□□□□ -2.85
NCKAP1-204ENST00000477988 LINC00643Q86TS7 51 aa-2.77□□□□□ -2.85
NCKAP1-204ENST00000477988 CENPFP49454 3210 aa-2.77□□□□□ -2.85
NCKAP1-204ENST00000477988 CNTLNQ9NXG0 1405 aa-2.78□□□□□ -2.85
NCKAP1-204ENST00000477988 LINC00587B1AMM8 73 aa-2.79□□□□□ -2.86
NCKAP1-204ENST00000477988 RBP2P50120 134 aa-2.79□□□□□ -2.86
NCKAP1-204ENST00000477988 SNRPFP62306 86 aaKnown RBP-2.79□□□□□ -2.86
NCKAP1-204ENST00000477988 PVALEFA0A1B0GWK0 134 aa-2.8□□□□□ -2.86
NCKAP1-204ENST00000477988 EFCAB10A6NFE3 127 aa-2.8□□□□□ -2.86
NCKAP1-204ENST00000477988 ATP5EP2Q5VTU8 51 aa-2.8□□□□□ -2.86
NCKAP1-204ENST00000477988 ETDCA0A1B0GVM5 59 aa-2.81□□□□□ -2.86
NCKAP1-204ENST00000477988 DNAH12Q6ZR08 3092 aa-2.82□□□□□ -2.86
NCKAP1-204ENST00000477988 EEA1Q15075 1411 aa-2.83□□□□□ -2.86
NCKAP1-204ENST00000477988 ABCC6O95255 1503 aa-2.83□□□□□ -2.86
NCKAP1-204ENST00000477988 ASPMQ8IZT6 3477 aa-2.84□□□□□ -2.86
NCKAP1-204ENST00000477988 ABCC3O15438 1527 aa-2.84□□□□□ -2.86
NCKAP1-204ENST00000477988 TIAM1Q13009 1591 aa-2.85□□□□□ -2.87
NCKAP1-204ENST00000477988 GLI2P10070 1586 aa-2.87□□□□□ -2.87
NCKAP1-204ENST00000477988 LMTK2Q8IWU2 1503 aa-2.87□□□□□ -2.87
NCKAP1-204ENST00000477988 C14orf144Q96I85 54 aa-2.87□□□□□ -2.87
NCKAP1-204ENST00000477988 MADDQ8WXG6 1647 aa-2.87□□□□□ -2.87
NCKAP1-204ENST00000477988 NCMAPQ5T1S8 102 aa-2.88□□□□□ -2.87
NCKAP1-204ENST00000477988 ENHOQ6UWT2 76 aa-2.88□□□□□ -2.87
NCKAP1-204ENST00000477988 SMIM13P0DJ93 91 aa-2.89□□□□□ -2.87
NCKAP1-204ENST00000477988 DEFB114Q30KQ6 69 aa-2.89□□□□□ -2.87
NCKAP1-204ENST00000477988 KAAG1Q9UBP8 84 aa-2.89□□□□□ -2.87
NCKAP1-204ENST00000477988 CDH23Q9H251 3354 aa-2.9□□□□□ -2.87
NCKAP1-204ENST00000477988 A0A087WXM4 84 aa-2.9□□□□□ -2.87
NCKAP1-204ENST00000477988 RRBP1Q9P2E9 1410 aaKnown RBP-2.92□□□□□ -2.88
NCKAP1-204ENST00000477988 KRTAP19-2Q3LHN2 52 aa-2.92□□□□□ -2.88
NCKAP1-204ENST00000477988 DEFB121Q5J5C9 76 aa-2.92□□□□□ -2.88
NCKAP1-204ENST00000477988 S100A8P05109 93 aa-2.93□□□□□ -2.88
NCKAP1-204ENST00000477988 S100A16Q96FQ6 103 aaKnown RBP-2.93□□□□□ -2.88
NCKAP1-204ENST00000477988 PYY3Q5JQD4 70 aa-2.94□□□□□ -2.88
NCKAP1-204ENST00000477988 SNHG12Q9BXW3 62 aa-2.95□□□□□ -2.88
NCKAP1-204ENST00000477988 ABRACLQ9P1F3 81 aa-2.95□□□□□ -2.88
NCKAP1-204ENST00000477988 UACAQ9BZF9 1416 aa-2.95□□□□□ -2.88
NCKAP1-204ENST00000477988 TCEAL7Q9BRU2 100 aa-2.96□□□□□ -2.88
NCKAP1-204ENST00000477988 ATP6V1G2-DDX39BF2Z307 99 aa-2.97□□□□□ -2.88
NCKAP1-204ENST00000477988 NRXN3Q9Y4C0 1643 aa-2.97□□□□□ -2.89
NCKAP1-204ENST00000477988 CFAP74Q9C0B2 1584 aa-2.98□□□□□ -2.89
NCKAP1-204ENST00000477988 KANTRA0A1W2PQU2 76 aa-2.98□□□□□ -2.89
NCKAP1-204ENST00000477988 M0R143 59 aa-2.98□□□□□ -2.89
NCKAP1-204ENST00000477988 BRCA2P51587 3418 aa-2.98□□□□□ -2.89
NCKAP1-204ENST00000477988 ALS2Q96Q42 1657 aa-2.98□□□□□ -2.89
NCKAP1-204ENST00000477988 VPS13AQ96RL7 3174 aa-2.99□□□□□ -2.89
NCKAP1-204ENST00000477988 VPS8Q8N3P4 1428 aa-2.99□□□□□ -2.89
NCKAP1-204ENST00000477988 POLR2KP53803 58 aaKnown RBP-2.99□□□□□ -2.89
NCKAP1-204ENST00000477988 CCDC180Q9P1Z9 1646 aa-3.01□□□□□ -2.89
NCKAP1-204ENST00000477988 ABCC1P33527 1531 aa-3.03□□□□□ -2.89
NCKAP1-204ENST00000477988 XIRP2A4UGR9 3374 aa-3.03□□□□□ -2.9
NCKAP1-204ENST00000477988 TDRG1Q3Y452 100 aa-3.04□□□□□ -2.9
NCKAP1-204ENST00000477988 MROH2AA6NES4 1674 aa-3.04□□□□□ -2.9
NCKAP1-204ENST00000477988 WFDC10BQ8IUB3 73 aa-3.05□□□□□ -2.9
NCKAP1-204ENST00000477988 SMIM27A0A1W2PRY6 76 aa-3.06□□□□□ -2.9
NCKAP1-204ENST00000477988 DCAF1Q9Y4B6 1507 aa-3.06□□□□□ -2.9
NCKAP1-204ENST00000477988 PKIAP61925 76 aa-3.08□□□□□ -2.9
NCKAP1-204ENST00000477988 LMO7Q8WWI1 1683 aa-3.08□□□□□ -2.9
NCKAP1-204ENST00000477988 ANKARQ7Z5J8 1434 aa-3.09□□□□□ -2.9
NCKAP1-204ENST00000477988 H3BUT2 72 aa-3.1□□□□□ -2.91
NCKAP1-204ENST00000477988 LINC00308Q8TCZ7 52 aa-3.11□□□□□ -2.91
NCKAP1-204ENST00000477988 EFCAB6Q5THR3 1501 aa-3.12□□□□□ -2.91
NCKAP1-204ENST00000477988 H3BVH4 76 aa-3.12□□□□□ -2.91
NCKAP1-204ENST00000477988 ST20Q9HBF5 79 aa-3.12□□□□□ -2.91
NCKAP1-204ENST00000477988 TMEM167BQ9NRX6 74 aa-3.12□□□□□ -2.91
NCKAP1-204ENST00000477988 ABCA8O94911 1581 aa-3.13□□□□□ -2.91
NCKAP1-204ENST00000477988 V9GYS6 101 aa-3.14□□□□□ -2.91
NCKAP1-204ENST00000477988 ABCA9Q8IUA7 1624 aa-3.15□□□□□ -2.91
NCKAP1-204ENST00000477988 PEG3Q9GZU2 1588 aa-3.15□□□□□ -2.91
NCKAP1-204ENST00000477988 K7EMI3 77 aa-3.15□□□□□ -2.91
NCKAP1-204ENST00000477988 DEFB131AP59861 70 aa-3.15□□□□□ -2.91
NCKAP1-204ENST00000477988 DEFB133Q30KQ1 61 aa-3.16□□□□□ -2.92
NCKAP1-204ENST00000477988 Q9H521 79 aa-3.16□□□□□ -2.92
NCKAP1-204ENST00000477988 CD52P31358 61 aa-3.17□□□□□ -2.92
NCKAP1-204ENST00000477988 ADIRFQ15847 76 aa-3.17□□□□□ -2.92
NCKAP1-204ENST00000477988 ATXN8Q156A1 80 aa-3.18□□□□□ -2.92
NCKAP1-204ENST00000477988 UTRNP46939 3433 aa-3.19□□□□□ -2.92
NCKAP1-204ENST00000477988 ABCA6Q8N139 1617 aa-3.19□□□□□ -2.92
NCKAP1-204ENST00000477988 M0R1W7 72 aa-3.2□□□□□ -2.92
NCKAP1-204ENST00000477988 SCRIBQ14160 1630 aa-3.2□□□□□ -2.92
NCKAP1-204ENST00000477988 SYCP2Q9BX26 1530 aa-3.2□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms