RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 C20orf166-AS1Q96NR2 134 aa2.7□□□□□ -1.98
PTCD3-212ENST00000477520 P0C880 135 aa2.69□□□□□ -1.98
PTCD3-212ENST00000477520 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
PTCD3-212ENST00000477520 KRTAP11-1Q8IUC1 163 aa2.69□□□□□ -1.98
PTCD3-212ENST00000477520 A0A096LNI7 61 aa2.68□□□□□ -1.98
PTCD3-212ENST00000477520 A0A1B0GU33 70 aa2.68□□□□□ -1.98
PTCD3-212ENST00000477520 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
PTCD3-212ENST00000477520 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
PTCD3-212ENST00000477520 DNAH7Q8WXX0 4024 aa2.67□□□□□ -1.98
PTCD3-212ENST00000477520 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
PTCD3-212ENST00000477520 DYNC2H1Q8NCM8 4307 aaKnown RBP2.66□□□□□ -1.98
PTCD3-212ENST00000477520 VPS13DQ5THJ4 4388 aa2.65□□□□□ -1.98
PTCD3-212ENST00000477520 IGLV9-49A0A0B4J1Y8 123 aa2.65□□□□□ -1.99
PTCD3-212ENST00000477520 Q6ZSA8 131 aa2.65□□□□□ -1.99
PTCD3-212ENST00000477520 DNAH1Q9P2D7 4330 aa2.65□□□□□ -1.99
PTCD3-212ENST00000477520 CSMD3Q7Z407 3707 aa2.65□□□□□ -1.99
PTCD3-212ENST00000477520 ALMS1Q8TCU4 4167 aa2.64□□□□□ -1.99
PTCD3-212ENST00000477520 H0YAA0 97 aa2.64□□□□□ -1.99
PTCD3-212ENST00000477520 SEC61BP60468 96 aaKnown RBP2.64□□□□□ -1.99
PTCD3-212ENST00000477520 H1FX-AS1Q4G0G2 97 aa2.64□□□□□ -1.99
PTCD3-212ENST00000477520 A0A087WTM6 91 aa2.63□□□□□ -1.99
PTCD3-212ENST00000477520 Q6ZRN7 208 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-212ENST00000477520 DNAH6Q9C0G6 4158 aa2.61□□□□□ -1.99
PTCD3-212ENST00000477520 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
PTCD3-212ENST00000477520 PSORS1C2Q9UIG4 136 aa2.61□□□□□ -1.99
PTCD3-212ENST00000477520 STARD9Q9P2P6 4700 aa2.61□□□□□ -1.99
PTCD3-212ENST00000477520 RPL37P61927 97 aaKnown RBP2.6□□□□□ -1.99
PTCD3-212ENST00000477520 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
PTCD3-212ENST00000477520 CRIPTQ9P021 101 aa2.6□□□□□ -1.99
PTCD3-212ENST00000477520 PLECQ15149 4684 aaKnown RBP2.6□□□□□ -1.99
PTCD3-212ENST00000477520 SPINK6Q6UWN8 80 aa2.59□□□□□ -1.99
PTCD3-212ENST00000477520 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-212ENST00000477520 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
PTCD3-212ENST00000477520 SPACA4Q8TDM5 124 aa2.57□□□□□ -2
PTCD3-212ENST00000477520 KMT2AQ03164 3969 aa2.57□□□□□ -2
PTCD3-212ENST00000477520 LYSTQ99698 3801 aa2.55□□□□□ -2
PTCD3-212ENST00000477520 KRTAP12-2P59991 146 aa2.55□□□□□ -2
PTCD3-212ENST00000477520 KMT2CQ8NEZ4 4911 aaKnown RBP2.54□□□□□ -2
PTCD3-212ENST00000477520 DNAH17Q9UFH2 4485 aa2.54□□□□□ -2
PTCD3-212ENST00000477520 SPINK1P00995 79 aa2.54□□□□□ -2
PTCD3-212ENST00000477520 CIRBP-AS1Q8TBR5 109 aa2.54□□□□□ -2
PTCD3-212ENST00000477520 DNAH2Q9P225 4427 aa2.54□□□□□ -2
PTCD3-212ENST00000477520 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
PTCD3-212ENST00000477520 DNAH10Q8IVF4 4471 aa2.53□□□□□ -2
PTCD3-212ENST00000477520 KRTAP10-1P60331 282 aa2.53□□□□□ -2
PTCD3-212ENST00000477520 CAMK2N1Q7Z7J9 78 aa2.53□□□□□ -2
PTCD3-212ENST00000477520 RYR2Q92736 4967 aa2.52□□□□□ -2.01
PTCD3-212ENST00000477520 RPS29P62273 56 aaKnown RBP2.52□□□□□ -2.01
PTCD3-212ENST00000477520 TPRXLQ17RH7 258 aa2.52□□□□□ -2.01
PTCD3-212ENST00000477520 TYMSOSQ8TAI1 123 aa2.51□□□□□ -2.01
PTCD3-212ENST00000477520 FAT2Q9NYQ8 4349 aa2.51□□□□□ -2.01
PTCD3-212ENST00000477520 FRAS1Q86XX4 4008 aa2.51□□□□□ -2.01
PTCD3-212ENST00000477520 PKHD1P08F94 4074 aa2.5□□□□□ -2.01
PTCD3-212ENST00000477520 PKD1P98161 4303 aa2.49□□□□□ -2.01
PTCD3-212ENST00000477520 DNAH11Q96DT5 4516 aa2.48□□□□□ -2.01
PTCD3-212ENST00000477520 SMR3BP02814 79 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-212ENST00000477520 RYR3Q15413 4870 aa2.47□□□□□ -2.01
PTCD3-212ENST00000477520 HECTD4Q9Y4D8 3996 aa2.46□□□□□ -2.02
PTCD3-212ENST00000477520 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
PTCD3-212ENST00000477520 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
PTCD3-212ENST00000477520 Q5VSD8 79 aa2.45□□□□□ -2.02
PTCD3-212ENST00000477520 PLAC4Q8WY50 150 aa2.45□□□□□ -2.02
PTCD3-212ENST00000477520 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
PTCD3-212ENST00000477520 SRRM2Q9UQ35 2752 aaKnown RBP2.44□□□□□ -2.02
PTCD3-212ENST00000477520 FLG2Q5D862 2391 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-212ENST00000477520 DYNC1H1Q14204 4646 aaKnown RBP2.44□□□□□ -2.02
PTCD3-212ENST00000477520 LRP1BQ9NZR2 4599 aa2.43□□□□□ -2.02
PTCD3-212ENST00000477520 S4R3F8 94 aa2.43□□□□□ -2.02
PTCD3-212ENST00000477520 M0QZ58 72 aa2.41□□□□□ -2.02
PTCD3-212ENST00000477520 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
PTCD3-212ENST00000477520 DNAH5Q8TE73 4624 aa2.41□□□□□ -2.02
PTCD3-212ENST00000477520 KIAA1109Q2LD37 5005 aa2.41□□□□□ -2.02
PTCD3-212ENST00000477520 HSPG2P98160 4391 aa2.4□□□□□ -2.02
PTCD3-212ENST00000477520 DNAH8Q96JB1 4490 aa2.4□□□□□ -2.02
PTCD3-212ENST00000477520 EPPK1P58107 5090 aaKnown RBP2.4□□□□□ -2.02
PTCD3-212ENST00000477520 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-212ENST00000477520 KRTAP13-2Q52LG2 175 aa2.4□□□□□ -2.03
PTCD3-212ENST00000477520 DMBT1Q9UGM3 2413 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-212ENST00000477520 APOBP04114 4563 aaKnown RBP2.4□□□□□ -2.03
PTCD3-212ENST00000477520 C10orf95Q9H7T3 257 aa2.38□□□□□ -2.03
PTCD3-212ENST00000477520 VPS13BQ7Z7G8 4022 aa2.38□□□□□ -2.03
PTCD3-212ENST00000477520 FAT1Q14517 4588 aa2.37□□□□□ -2.03
PTCD3-212ENST00000477520 RYR1P21817 5038 aa2.36□□□□□ -2.03
PTCD3-212ENST00000477520 BIRC6Q9NR09 4857 aa2.36□□□□□ -2.03
PTCD3-212ENST00000477520 A0A0D9SG42 100 aa2.36□□□□□ -2.03
PTCD3-212ENST00000477520 KRTAP1-4P0C5Y4 121 aa2.36□□□□□ -2.03
PTCD3-212ENST00000477520 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
PTCD3-212ENST00000477520 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
PTCD3-212ENST00000477520 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
PTCD3-212ENST00000477520 INE1O15225 51 aa2.32□□□□□ -2.04
PTCD3-212ENST00000477520 HERC2O95714 4834 aa2.31□□□□□ -2.04
PTCD3-212ENST00000477520 PKHD1L1Q86WI1 4243 aa2.31□□□□□ -2.04
PTCD3-212ENST00000477520 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
PTCD3-212ENST00000477520 PCLOQ9Y6V0 5065 aa2.29□□□□□ -2.04
PTCD3-212ENST00000477520 MYCBP2O75592 4640 aa2.27□□□□□ -2.05
PTCD3-212ENST00000477520 LRP1Q07954 4544 aaKnown RBP2.26□□□□□ -2.05
PTCD3-212ENST00000477520 ABCA13Q86UQ4 5058 aa2.26□□□□□ -2.05
PTCD3-212ENST00000477520 FAT3Q8TDW7 4589 aa2.24□□□□□ -2.05
PTCD3-212ENST00000477520 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
PTCD3-212ENST00000477520 TNXBP22105 4242 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms