RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
PCCB-210ENST00000471595 ZNF469Q96JG9 3925 aaPredicted RBP5.56□□□□□ -1.52
PCCB-210ENST00000471595 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
PCCB-210ENST00000471595 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
PCCB-210ENST00000471595 DNAH17Q9UFH2 4485 aa5.52□□□□□ -1.53
PCCB-210ENST00000471595 DNAH10Q8IVF4 4471 aa5.51□□□□□ -1.53
PCCB-210ENST00000471595 PLECQ15149 4684 aaKnown RBP5.51□□□□□ -1.53
PCCB-210ENST00000471595 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
PCCB-210ENST00000471595 VPS13DQ5THJ4 4388 aa5.5□□□□□ -1.53
PCCB-210ENST00000471595 DNAH2Q9P225 4427 aa5.47□□□□□ -1.53
PCCB-210ENST00000471595 CSMD3Q7Z407 3707 aa5.46□□□□□ -1.53
PCCB-210ENST00000471595 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
PCCB-210ENST00000471595 DNAH3Q8TD57 4116 aa5.39□□□□□ -1.55
PCCB-210ENST00000471595 KRTAP4-1Q9BYQ7 146 aa5.35□□□□□ -1.55
PCCB-210ENST00000471595 DYNC2H1Q8NCM8 4307 aaKnown RBP5.29□□□□□ -1.56
PCCB-210ENST00000471595 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
PCCB-210ENST00000471595 SACSQ9NZJ4 4579 aa5.27□□□□□ -1.57
PCCB-210ENST00000471595 DNAH8Q96JB1 4490 aa5.27□□□□□ -1.57
PCCB-210ENST00000471595 STARD9Q9P2P6 4700 aa5.27□□□□□ -1.57
PCCB-210ENST00000471595 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
PCCB-210ENST00000471595 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
PCCB-210ENST00000471595 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
PCCB-210ENST00000471595 FAT2Q9NYQ8 4349 aa5.22□□□□□ -1.57
PCCB-210ENST00000471595 MT1HP80294 61 aa5.21□□□□□ -1.58
PCCB-210ENST00000471595 FAT1Q14517 4588 aa5.16□□□□□ -1.58
PCCB-210ENST00000471595 MT2AP02795 61 aa5.16□□□□□ -1.58
PCCB-210ENST00000471595 DNHD1Q96M86 4753 aa5.13□□□□□ -1.59
PCCB-210ENST00000471595 ANK2Q01484 3957 aa5.13□□□□□ -1.59
PCCB-210ENST00000471595 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
PCCB-210ENST00000471595 DNAH6Q9C0G6 4158 aa5.09□□□□□ -1.59
PCCB-210ENST00000471595 VPS13BQ7Z7G8 4022 aa5.05□□□□□ -1.6
PCCB-210ENST00000471595 MT1FP04733 61 aa5.05□□□□□ -1.6
PCCB-210ENST00000471595 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
PCCB-210ENST00000471595 KMT2AQ03164 3969 aa5.04□□□□□ -1.6
PCCB-210ENST00000471595 APOBP04114 4563 aaKnown RBP5.03□□□□□ -1.6
PCCB-210ENST00000471595 RYR1P21817 5038 aa5□□□□□ -1.61
PCCB-210ENST00000471595 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
PCCB-210ENST00000471595 CMYA5Q8N3K9 4069 aa4.96□□□□□ -1.62
PCCB-210ENST00000471595 DNAH7Q8WXX0 4024 aa4.96□□□□□ -1.62
PCCB-210ENST00000471595 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
PCCB-210ENST00000471595 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
PCCB-210ENST00000471595 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
PCCB-210ENST00000471595 FRAS1Q86XX4 4008 aa4.91□□□□□ -1.62
PCCB-210ENST00000471595 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.62
PCCB-210ENST00000471595 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
PCCB-210ENST00000471595 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
PCCB-210ENST00000471595 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
PCCB-210ENST00000471595 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.63
PCCB-210ENST00000471595 RYR3Q15413 4870 aa4.83□□□□□ -1.64
PCCB-210ENST00000471595 LYSTQ99698 3801 aa4.83□□□□□ -1.64
PCCB-210ENST00000471595 RYR2Q92736 4967 aa4.8□□□□□ -1.64
PCCB-210ENST00000471595 MYCBP2O75592 4640 aa4.77□□□□□ -1.65
PCCB-210ENST00000471595 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
PCCB-210ENST00000471595 MT1XP80297 61 aa4.73□□□□□ -1.65
PCCB-210ENST00000471595 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
PCCB-210ENST00000471595 KIAA1109Q2LD37 5005 aa4.71□□□□□ -1.66
PCCB-210ENST00000471595 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
PCCB-210ENST00000471595 HSPG2P98160 4391 aa4.69□□□□□ -1.66
PCCB-210ENST00000471595 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
PCCB-210ENST00000471595 MT1BP07438 61 aa4.68□□□□□ -1.66
PCCB-210ENST00000471595 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
PCCB-210ENST00000471595 LCE2CQ5TA81 110 aa4.62□□□□□ -1.67
PCCB-210ENST00000471595 HERC1Q15751 4861 aa4.62□□□□□ -1.67
PCCB-210ENST00000471595 HYDINQ4G0P3 5121 aa4.56□□□□□ -1.68
PCCB-210ENST00000471595 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
PCCB-210ENST00000471595 PKD1P98161 4303 aa4.53□□□□□ -1.68
PCCB-210ENST00000471595 PKHD1L1Q86WI1 4243 aa4.52□□□□□ -1.69
PCCB-210ENST00000471595 LRP2P98164 4655 aa4.51□□□□□ -1.69
PCCB-210ENST00000471595 KRTAP19-2Q3LHN2 52 aa4.48□□□□□ -1.69
PCCB-210ENST00000471595 PKHD1P08F94 4074 aa4.48□□□□□ -1.69
PCCB-210ENST00000471595 HERC2O95714 4834 aa4.46□□□□□ -1.7
PCCB-210ENST00000471595 TNXBP22105 4242 aa4.43□□□□□ -1.7
PCCB-210ENST00000471595 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
PCCB-210ENST00000471595 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
PCCB-210ENST00000471595 MT1GP13640 62 aa4.41□□□□□ -1.7
PCCB-210ENST00000471595 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
PCCB-210ENST00000471595 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
PCCB-210ENST00000471595 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
PCCB-210ENST00000471595 LPAP08519 4548 aa4.37□□□□□ -1.71
PCCB-210ENST00000471595 SPRR2EP22531 72 aa4.37□□□□□ -1.71
PCCB-210ENST00000471595 SPRR2BP35325 72 aa4.37□□□□□ -1.71
PCCB-210ENST00000471595 SPRR2AP35326 72 aa4.37□□□□□ -1.71
PCCB-210ENST00000471595 KMT2CQ8NEZ4 4911 aaKnown RBP4.32□□□□□ -1.72
PCCB-210ENST00000471595 MUC17Q685J3 4493 aa4.31□□□□□ -1.72
PCCB-210ENST00000471595 FLGP20930 4061 aaPredicted RBP4.31□□□□□ -1.72
PCCB-210ENST00000471595 LCE2BO14633 110 aa4.28□□□□□ -1.72
PCCB-210ENST00000471595 MT1LQ93083 61 aa4.28□□□□□ -1.72
PCCB-210ENST00000471595 PCLOQ9Y6V0 5065 aa4.25□□□□□ -1.73
PCCB-210ENST00000471595 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
PCCB-210ENST00000471595 MT1EP04732 61 aa4.24□□□□□ -1.73
PCCB-210ENST00000471595 SPRR2DP22532 72 aa4.22□□□□□ -1.73
PCCB-210ENST00000471595 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.73
PCCB-210ENST00000471595 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
PCCB-210ENST00000471595 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
PCCB-210ENST00000471595 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
PCCB-210ENST00000471595 MT1MQ8N339 61 aa4.08□□□□□ -1.76
PCCB-210ENST00000471595 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
PCCB-210ENST00000471595 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
PCCB-210ENST00000471595 EPPK1P58107 5090 aaKnown RBP3.96□□□□□ -1.78
PCCB-210ENST00000471595 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms