RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SPINK7P58062 85 aa0.81□□□□□ -2.28
LSM5-209ENST00000468872 SPATA8Q6RVD6 105 aa0.81□□□□□ -2.28
LSM5-209ENST00000468872 S100A16Q96FQ6 103 aaKnown RBP0.81□□□□□ -2.28
LSM5-209ENST00000468872 ETDBQ3ZM63 59 aa0.8□□□□□ -2.28
LSM5-209ENST00000468872 I3L2K1 104 aa0.79□□□□□ -2.28
LSM5-209ENST00000468872 TRBV6-1A0A0K0K1D8 114 aa0.78□□□□□ -2.28
LSM5-209ENST00000468872 PEA15Q15121 130 aa0.78□□□□□ -2.28
LSM5-209ENST00000468872 NCBP2-AS2Q69YL0 99 aa0.78□□□□□ -2.28
LSM5-209ENST00000468872 WFDC10BQ8IUB3 73 aa0.78□□□□□ -2.28
LSM5-209ENST00000468872 DEFB107AQ8IZN7 70 aa0.78□□□□□ -2.28
LSM5-209ENST00000468872 APELAP0DMC3 54 aa0.77□□□□□ -2.29
LSM5-209ENST00000468872 DEFB130BP0DP73 79 aa0.77□□□□□ -2.29
LSM5-209ENST00000468872 DEFB130AP0DP74 79 aa0.77□□□□□ -2.29
LSM5-209ENST00000468872 HMGN3Q15651 99 aa0.77□□□□□ -2.29
LSM5-209ENST00000468872 A0A096LPF7 62 aa0.76□□□□□ -2.29
LSM5-209ENST00000468872 LINC00959A0A1B0GUT2 108 aa0.76□□□□□ -2.29
LSM5-209ENST00000468872 H0Y9P7 68 aa0.76□□□□□ -2.29
LSM5-209ENST00000468872 HMGN2P05204 90 aaKnown RBP0.76□□□□□ -2.29
LSM5-209ENST00000468872 NMSQ5H8A3 153 aa0.76□□□□□ -2.29
LSM5-209ENST00000468872 IQCF6A8MYZ5 107 aa0.75□□□□□ -2.29
LSM5-209ENST00000468872 H3BQF6 201 aa0.75□□□□□ -2.29
LSM5-209ENST00000468872 RABAC1Q9UI14 185 aa0.75□□□□□ -2.29
LSM5-209ENST00000468872 UBE2D4Q9Y2X8 147 aa0.75□□□□□ -2.29
LSM5-209ENST00000468872 LEPROTL1O95214 131 aa0.74□□□□□ -2.29
LSM5-209ENST00000468872 COX6A2Q02221 97 aa0.74□□□□□ -2.29
LSM5-209ENST00000468872 CNFNQ9BYD5 112 aa0.74□□□□□ -2.29
LSM5-209ENST00000468872 SPCS1Q9Y6A9 102 aa0.74□□□□□ -2.29
LSM5-209ENST00000468872 C6orf201Q7Z4U5 140 aa0.73□□□□□ -2.29
LSM5-209ENST00000468872 TP53AIP1Q9HCN2 124 aa0.73□□□□□ -2.29
LSM5-209ENST00000468872 D6R8Y8 96 aa0.72□□□□□ -2.29
LSM5-209ENST00000468872 SMIM11AP58511 58 aa0.72□□□□□ -2.29
LSM5-209ENST00000468872 DEFB131AP59861 70 aa0.72□□□□□ -2.29
LSM5-209ENST00000468872 MUSTN1Q8IVN3 82 aa0.72□□□□□ -2.29
LSM5-209ENST00000468872 ALKAL2Q6UX46 152 aa0.71□□□□□ -2.3
LSM5-209ENST00000468872 LINC00643Q86TS7 51 aa0.71□□□□□ -2.3
LSM5-209ENST00000468872 A0A1B0GU69 56 aa0.7□□□□□ -2.3
LSM5-209ENST00000468872 IGLC3P0DOY3 106 aa0.7□□□□□ -2.3
LSM5-209ENST00000468872 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
LSM5-209ENST00000468872 RPS27LQ71UM5 84 aaKnown RBP0.7□□□□□ -2.3
LSM5-209ENST00000468872 LEAP2Q969E1 77 aa0.7□□□□□ -2.3
LSM5-209ENST00000468872 ST20Q9HBF5 79 aa0.7□□□□□ -2.3
LSM5-209ENST00000468872 PRO0255Q9UI72 69 aa0.7□□□□□ -2.3
LSM5-209ENST00000468872 TRBV7-4A0A0J9YYF1 115 aa0.69□□□□□ -2.3
LSM5-209ENST00000468872 MYMXA0A1B0GTQ4 84 aa0.69□□□□□ -2.3
LSM5-209ENST00000468872 H3BNG1 76 aa0.69□□□□□ -2.3
LSM5-209ENST00000468872 IGLC2P0DOY2 106 aa0.69□□□□□ -2.3
LSM5-209ENST00000468872 GNGT1P63211 74 aa0.69□□□□□ -2.3
LSM5-209ENST00000468872 PRH1P02810 166 aa0.68□□□□□ -2.3
LSM5-209ENST00000468872 S100A3P33764 101 aa0.68□□□□□ -2.3
LSM5-209ENST00000468872 S100A13Q99584 98 aa0.68□□□□□ -2.3
LSM5-209ENST00000468872 H3BUA1 57 aa0.67□□□□□ -2.3
LSM5-209ENST00000468872 LINC01556Q5JQF7 62 aa0.67□□□□□ -2.3
LSM5-209ENST00000468872 USMG5Q96IX5 58 aa0.67□□□□□ -2.3
LSM5-209ENST00000468872 ACYP1P07311 99 aa0.66□□□□□ -2.3
LSM5-209ENST00000468872 PLGLAQ15195 96 aa0.66□□□□□ -2.3
LSM5-209ENST00000468872 BVES-AS1Q5T3Y7 98 aa0.66□□□□□ -2.3
LSM5-209ENST00000468872 HEPN1Q6WQI6 88 aa0.66□□□□□ -2.3
LSM5-209ENST00000468872 ADIRFQ15847 76 aa0.65□□□□□ -2.31
LSM5-209ENST00000468872 KRTAP19-8Q3LI54 63 aa0.65□□□□□ -2.31
LSM5-209ENST00000468872 Q8IZM0 81 aa0.65□□□□□ -2.31
LSM5-209ENST00000468872 KANTRA0A1W2PQU2 76 aa0.64□□□□□ -2.31
LSM5-209ENST00000468872 K7EQZ3 153 aa0.64□□□□□ -2.31
LSM5-209ENST00000468872 CEBPZOSA8MTT3 80 aa0.63□□□□□ -2.31
LSM5-209ENST00000468872 H3BUT2 72 aa0.63□□□□□ -2.31
LSM5-209ENST00000468872 NDUFA3O95167 84 aa0.63□□□□□ -2.31
LSM5-209ENST00000468872 PIGYQ3MUY2 71 aa0.63□□□□□ -2.31
LSM5-209ENST00000468872 TTTY10Q9BZA0 68 aa0.63□□□□□ -2.31
LSM5-209ENST00000468872 A0A1B0GUT8 65 aa0.62□□□□□ -2.31
LSM5-209ENST00000468872 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
LSM5-209ENST00000468872 NOP10Q9NPE3 64 aaKnown RBP0.62□□□□□ -2.31
LSM5-209ENST00000468872 A0A096LNI7 61 aa0.61□□□□□ -2.31
LSM5-209ENST00000468872 DEFB1P60022 68 aa0.61□□□□□ -2.31
LSM5-209ENST00000468872 RHPN1-AS1Q9BWJ2 59 aa0.61□□□□□ -2.31
LSM5-209ENST00000468872 CRIPTQ9P021 101 aa0.61□□□□□ -2.31
LSM5-209ENST00000468872 TIMM8BQ9Y5J9 83 aaPredicted RBP0.59□□□□□ -2.31
LSM5-209ENST00000468872 FXYD6-FXYD2A0A087WZ82 144 aa0.58□□□□□ -2.32
LSM5-209ENST00000468872 TRAV21A0A0B4J279 112 aa0.58□□□□□ -2.32
LSM5-209ENST00000468872 MT1XP80297 61 aa0.58□□□□□ -2.32
LSM5-209ENST00000468872 MT1MQ8N339 61 aa0.58□□□□□ -2.32
LSM5-209ENST00000468872 C18orf32Q8TCD1 76 aa0.58□□□□□ -2.32
LSM5-209ENST00000468872 SPRR1AP35321 89 aa0.57□□□□□ -2.32
LSM5-209ENST00000468872 H0YAA0 97 aa0.56□□□□□ -2.32
LSM5-209ENST00000468872 MT1EP04732 61 aa0.56□□□□□ -2.32
LSM5-209ENST00000468872 IFI6P09912 130 aa0.56□□□□□ -2.32
LSM5-209ENST00000468872 HTN1P15515 57 aa0.56□□□□□ -2.32
LSM5-209ENST00000468872 SPRR1BP22528 89 aa0.56□□□□□ -2.32
LSM5-209ENST00000468872 COX7BP24311 80 aa0.55□□□□□ -2.32
LSM5-209ENST00000468872 NDUFA4O00483 81 aa0.54□□□□□ -2.32
LSM5-209ENST00000468872 MT1GP13640 62 aa0.54□□□□□ -2.32
LSM5-209ENST00000468872 KRTAP19-7Q3SYF9 63 aa0.53□□□□□ -2.32
LSM5-209ENST00000468872 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
LSM5-209ENST00000468872 Q5BKY6 102 aa0.52□□□□□ -2.33
LSM5-209ENST00000468872 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
LSM5-209ENST00000468872 CPSF4LA6NMK7 179 aaKnown RBP0.51□□□□□ -2.33
LSM5-209ENST00000468872 CFDP00746 253 aaPredicted RBP0.51□□□□□ -2.33
LSM5-209ENST00000468872 ATP5EP2Q5VTU8 51 aa0.51□□□□□ -2.33
LSM5-209ENST00000468872 TMEM167AQ8TBQ9 72 aa0.51□□□□□ -2.33
LSM5-209ENST00000468872 MRPL34Q9BQ48 92 aaKnown RBP0.51□□□□□ -2.33
LSM5-209ENST00000468872 SMIM13P0DJ93 91 aa0.5□□□□□ -2.33
LSM5-209ENST00000468872 ENHOQ6UWT2 76 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms