RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 A0A1B0GUT8 65 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 RBAKDNA6NC62 111 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 H3BVH4 76 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 MT-ATP8P03928 68 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 PDE6GP18545 87 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 IFI27P40305 119 aaPredicted RBP0.92□□□□□ -2.26
FN1-215ENST00000461974 UBE2D3P61077 147 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 UBE2D2P62837 147 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 UBE2L3P68036 154 aaKnown RBP0.92□□□□□ -2.26
FN1-215ENST00000461974 ETDBQ3ZM63 59 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 C9orf116Q5BN46 136 aaPredicted RBP0.92□□□□□ -2.26
FN1-215ENST00000461974 C10orf113Q5VZT2 155 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 SPAG11AQ6PDA7 123 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 IFI27L1Q96BM0 104 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 MRPL35Q9NZE8 188 aaKnown RBP0.92□□□□□ -2.26
FN1-215ENST00000461974 HIGD1BQ9P298 99 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 LENEPQ9Y5L5 61 aa0.92□□□□□ -2.26
FN1-215ENST00000461974 TRBV7-3A0A075B6L6 115 aa0.91□□□□□ -2.26
FN1-215ENST00000461974 TRBV25-1A0A075B6N4 114 aa0.91□□□□□ -2.26
FN1-215ENST00000461974 TRBV10-3A0A0K0K1G6 114 aa0.91□□□□□ -2.26
FN1-215ENST00000461974 SPRR2EP22531 72 aa0.91□□□□□ -2.26
FN1-215ENST00000461974 SPRR2BP35325 72 aa0.91□□□□□ -2.26
FN1-215ENST00000461974 SPRR2AP35326 72 aa0.91□□□□□ -2.26
FN1-215ENST00000461974 COX6B2Q6YFQ2 88 aa0.91□□□□□ -2.26
FN1-215ENST00000461974 C20orf78Q9BR46 151 aa0.91□□□□□ -2.26
FN1-215ENST00000461974 TRAV13-2A0A0B4J235 113 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 MYMXA0A1B0GTQ4 84 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 LINC01549A6NIU2 74 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 D6R8Y8 96 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 K7EMI3 77 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 M0R3E3 92 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 CCKP06307 115 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 ARMS2P0C7Q2 107 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 PLNP26678 52 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 ATP5EP56381 51 aaPredicted RBP0.9□□□□□ -2.27
FN1-215ENST00000461974 RPS29P62273 56 aaKnown RBP0.9□□□□□ -2.27
FN1-215ENST00000461974 SFTA2Q6UW10 78 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 C5orf38Q86SI9 138 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 FAM167A-AS1Q96KT0 104 aa0.9□□□□□ -2.27
FN1-215ENST00000461974 NXT2Q9NPJ8 142 aaKnown RBP0.9□□□□□ -2.27
FN1-215ENST00000461974 TRBV6-1A0A0K0K1D8 114 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 LOC101927531A0A1B0GV80 90 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 ZNF815PA8K554 130 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 HCG22E2RYF7 251 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 F8VRH5 84 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 COX6CP09669 75 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 CRIP1P50238 77 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 ATXN8Q156A1 80 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 ZNF56Q15929 161 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 TMEM170BQ5T4T1 132 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 Q86TA4 180 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 PRO1854Q9UHT4 67 aa0.89□□□□□ -2.27
FN1-215ENST00000461974 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
FN1-215ENST00000461974 TRAV21A0A0B4J279 112 aa0.88□□□□□ -2.27
FN1-215ENST00000461974 TEX49A0A1B0GTD5 131 aa0.88□□□□□ -2.27
FN1-215ENST00000461974 LINC01546A6NGU7 62 aa0.88□□□□□ -2.27
FN1-215ENST00000461974 PPP1R17O96001 155 aa0.88□□□□□ -2.27
FN1-215ENST00000461974 SPINK1P00995 79 aa0.88□□□□□ -2.27
FN1-215ENST00000461974 ACYP1P07311 99 aa0.88□□□□□ -2.27
FN1-215ENST00000461974 SPRR2DP22532 72 aa0.88□□□□□ -2.27
FN1-215ENST00000461974 CLPSL2Q6UWE3 100 aa0.88□□□□□ -2.27
FN1-215ENST00000461974 TRBV30A0A0K0K1B3 111 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 TRBV7-7A0A0K0K1E9 115 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 ATOX1O00244 68 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 NCR3O14931 201 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 BCE1O60756 84 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 MGPP08493 103 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 LINC00643Q86TS7 51 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 MUSTN1Q8IVN3 82 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 C20orf197Q8N268 126 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 SMIM2Q9BVW6 85 aa0.87□□□□□ -2.27
FN1-215ENST00000461974 hADV29S1A0JD25 119 aa0.86□□□□□ -2.27
FN1-215ENST00000461974 I3L3M4 83 aa0.86□□□□□ -2.27
FN1-215ENST00000461974 RPL37P61927 97 aaKnown RBP0.86□□□□□ -2.27
FN1-215ENST00000461974 Q6ZQY7 126 aa0.86□□□□□ -2.27
FN1-215ENST00000461974 SERP2Q8N6R1 65 aa0.86□□□□□ -2.27
FN1-215ENST00000461974 RPL39LQ96EH5 51 aaKnown RBP0.86□□□□□ -2.27
FN1-215ENST00000461974 SPRR2FQ96RM1 72 aa0.86□□□□□ -2.27
FN1-215ENST00000461974 CNFNQ9BYD5 112 aa0.86□□□□□ -2.27
FN1-215ENST00000461974 UBE2D4Q9Y2X8 147 aa0.86□□□□□ -2.27
FN1-215ENST00000461974 IGIPA6NJ69 53 aa0.85□□□□□ -2.27
FN1-215ENST00000461974 COX7B2Q8TF08 81 aa0.85□□□□□ -2.27
FN1-215ENST00000461974 LINC00208Q96KT6 92 aa0.85□□□□□ -2.27
FN1-215ENST00000461974 CYP4F30PQ9H0H9 118 aa0.85□□□□□ -2.27
FN1-215ENST00000461974 LINC00959A0A1B0GUT2 108 aa0.84□□□□□ -2.27
FN1-215ENST00000461974 H0YGX0 51 aa0.84□□□□□ -2.27
FN1-215ENST00000461974 MT1BP07438 61 aa0.84□□□□□ -2.27
FN1-215ENST00000461974 POLR2KP53803 58 aaKnown RBP0.84□□□□□ -2.27
FN1-215ENST00000461974 RPL39P62891 51 aaKnown RBP0.84□□□□□ -2.27
FN1-215ENST00000461974 FAM74A4Q5TZK3 123 aa0.84□□□□□ -2.27
FN1-215ENST00000461974 Q6JHZ5 121 aa0.84□□□□□ -2.27
FN1-215ENST00000461974 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
FN1-215ENST00000461974 A0A087WVE0 104 aa0.83□□□□□ -2.28
FN1-215ENST00000461974 M0QY20 66 aa0.83□□□□□ -2.28
FN1-215ENST00000461974 NDUFA1O15239 70 aa0.83□□□□□ -2.28
FN1-215ENST00000461974 NDUFC1O43677 76 aa0.83□□□□□ -2.28
FN1-215ENST00000461974 LINC00158P58513 81 aa0.83□□□□□ -2.28
FN1-215ENST00000461974 KLKP1Q107X0 134 aa0.83□□□□□ -2.28
FN1-215ENST00000461974 ATP5EP2Q5VTU8 51 aa0.83□□□□□ -2.28
FN1-215ENST00000461974 LINC00575Q6W349 94 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms