RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 LOC110117498A0A087WWA1 95 aa2.73□□□□□ -1.97
PMS1-208ENST00000421722 CXCL6P80162 114 aa2.72□□□□□ -1.97
PMS1-208ENST00000421722 PLAC4Q8WY50 150 aa2.72□□□□□ -1.97
PMS1-208ENST00000421722 HIST1H2BLQ99880 126 aa2.72□□□□□ -1.97
PMS1-208ENST00000421722 S100A2P29034 98 aa2.71□□□□□ -1.98
PMS1-208ENST00000421722 NREPQ16612 68 aa2.71□□□□□ -1.98
PMS1-208ENST00000421722 JMJD7-PLA2G4BH0Y9G9 81 aa2.71□□□□□ -1.98
PMS1-208ENST00000421722 H0YAA0 97 aa2.71□□□□□ -1.98
PMS1-208ENST00000421722 PAM16Q9Y3D7 125 aa2.71□□□□□ -1.98
PMS1-208ENST00000421722 BAALC-AS2P0C853 105 aa2.7□□□□□ -1.98
PMS1-208ENST00000421722 A8MUN3 132 aa2.7□□□□□ -1.98
PMS1-208ENST00000421722 FXYD2P54710 66 aa2.7□□□□□ -1.98
PMS1-208ENST00000421722 HCG22E2RYF7 251 aa2.68□□□□□ -1.98
PMS1-208ENST00000421722 C14orf144Q96I85 54 aa2.68□□□□□ -1.98
PMS1-208ENST00000421722 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
PMS1-208ENST00000421722 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
PMS1-208ENST00000421722 CASC2Q6XLA1 102 aa2.66□□□□□ -1.98
PMS1-208ENST00000421722 SPATA45Q537H7 98 aa2.66□□□□□ -1.98
PMS1-208ENST00000421722 SCGB1C2P0DMR2 95 aa2.65□□□□□ -1.99
PMS1-208ENST00000421722 HSD52Q0P140 79 aa2.65□□□□□ -1.99
PMS1-208ENST00000421722 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
PMS1-208ENST00000421722 A0A0A0MQY5 61 aa2.64□□□□□ -1.99
PMS1-208ENST00000421722 K7ERJ3 54 aa2.64□□□□□ -1.99
PMS1-208ENST00000421722 BPY2O14599 106 aa2.63□□□□□ -1.99
PMS1-208ENST00000421722 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
PMS1-208ENST00000421722 ATXN8Q156A1 80 aa2.63□□□□□ -1.99
PMS1-208ENST00000421722 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
PMS1-208ENST00000421722 VAMP8Q9BV40 100 aa2.62□□□□□ -1.99
PMS1-208ENST00000421722 KRTAP10-7P60409 375 aaPredicted RBP2.61□□□□□ -1.99
PMS1-208ENST00000421722 C14orf132Q9NPU4 83 aa2.61□□□□□ -1.99
PMS1-208ENST00000421722 NDUFC1O43677 76 aa2.6□□□□□ -1.99
PMS1-208ENST00000421722 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
PMS1-208ENST00000421722 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
PMS1-208ENST00000421722 NAA38Q9BRA0 125 aaKnown RBP2.6□□□□□ -1.99
PMS1-208ENST00000421722 S100A6P06703 90 aa2.59□□□□□ -1.99
PMS1-208ENST00000421722 TP53AIP1Q9HCN2 124 aa2.58□□□□□ -2
PMS1-208ENST00000421722 A0A087WVE0 104 aa2.58□□□□□ -2
PMS1-208ENST00000421722 S100A1P23297 94 aa2.58□□□□□ -2
PMS1-208ENST00000421722 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
PMS1-208ENST00000421722 C20orf197Q8N268 126 aa2.56□□□□□ -2
PMS1-208ENST00000421722 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
PMS1-208ENST00000421722 Q8N9L7 120 aa2.55□□□□□ -2
PMS1-208ENST00000421722 CYP4F30PQ9H0H9 118 aa2.55□□□□□ -2
PMS1-208ENST00000421722 R4GN34 69 aa2.55□□□□□ -2
PMS1-208ENST00000421722 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
PMS1-208ENST00000421722 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
PMS1-208ENST00000421722 MT4P47944 62 aa2.53□□□□□ -2
PMS1-208ENST00000421722 M0QZ58 72 aa2.52□□□□□ -2.01
PMS1-208ENST00000421722 LOC101927531A0A1B0GV80 90 aa2.51□□□□□ -2.01
PMS1-208ENST00000421722 UQCR10Q9UDW1 63 aa2.51□□□□□ -2.01
PMS1-208ENST00000421722 TRAV22A0A0B4J277 110 aa2.49□□□□□ -2.01
PMS1-208ENST00000421722 MT1EP04732 61 aa2.49□□□□□ -2.01
PMS1-208ENST00000421722 ACYP1P07311 99 aa2.49□□□□□ -2.01
PMS1-208ENST00000421722 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
PMS1-208ENST00000421722 H3BT86 120 aa2.49□□□□□ -2.01
PMS1-208ENST00000421722 CYSTM1Q9H1C7 97 aa2.49□□□□□ -2.01
PMS1-208ENST00000421722 KRTAP19-7Q3SYF9 63 aa2.48□□□□□ -2.01
PMS1-208ENST00000421722 P0C880 135 aa2.47□□□□□ -2.01
PMS1-208ENST00000421722 MT1GP13640 62 aa2.46□□□□□ -2.02
PMS1-208ENST00000421722 TSTD3H0UI37 97 aa2.45□□□□□ -2.02
PMS1-208ENST00000421722 K7EP34 96 aa2.45□□□□□ -2.02
PMS1-208ENST00000421722 LINC01554Q52M75 96 aa2.45□□□□□ -2.02
PMS1-208ENST00000421722 UBL5Q9BZL1 73 aa2.45□□□□□ -2.02
PMS1-208ENST00000421722 M0R143 59 aa2.44□□□□□ -2.02
PMS1-208ENST00000421722 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
PMS1-208ENST00000421722 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
PMS1-208ENST00000421722 PYY3Q5JQD4 70 aa2.42□□□□□ -2.02
PMS1-208ENST00000421722 ATOX1O00244 68 aa2.41□□□□□ -2.02
PMS1-208ENST00000421722 UQCRQO14949 82 aa2.39□□□□□ -2.03
PMS1-208ENST00000421722 BATFQ16520 125 aa2.39□□□□□ -2.03
PMS1-208ENST00000421722 MT1MQ8N339 61 aa2.39□□□□□ -2.03
PMS1-208ENST00000421722 MT-ATP8P03928 68 aa2.39□□□□□ -2.03
PMS1-208ENST00000421722 MT3P25713 68 aa2.38□□□□□ -2.03
PMS1-208ENST00000421722 H0Y9P7 68 aa2.37□□□□□ -2.03
PMS1-208ENST00000421722 SPCS1Q9Y6A9 102 aa2.35□□□□□ -2.03
PMS1-208ENST00000421722 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
PMS1-208ENST00000421722 TAX1BP3O14907 124 aa2.34□□□□□ -2.03
PMS1-208ENST00000421722 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
PMS1-208ENST00000421722 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
PMS1-208ENST00000421722 MT1LQ93083 61 aa2.33□□□□□ -2.04
PMS1-208ENST00000421722 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
PMS1-208ENST00000421722 A0A1W2PPM0 123 aa2.32□□□□□ -2.04
PMS1-208ENST00000421722 CAMK2N1Q7Z7J9 78 aa2.3□□□□□ -2.04
PMS1-208ENST00000421722 DMAC1Q96GE9 116 aa2.29□□□□□ -2.04
PMS1-208ENST00000421722 LINC00208Q96KT6 92 aa2.28□□□□□ -2.04
PMS1-208ENST00000421722 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
PMS1-208ENST00000421722 A0A0D9SG42 100 aa2.28□□□□□ -2.05
PMS1-208ENST00000421722 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
PMS1-208ENST00000421722 SPTSSBQ8NFR3 76 aa2.26□□□□□ -2.05
PMS1-208ENST00000421722 TRAV7A0A075B6U4 112 aa2.26□□□□□ -2.05
PMS1-208ENST00000421722 MP68P56378 58 aa2.25□□□□□ -2.05
PMS1-208ENST00000421722 PRO0461Q9UI25 63 aa2.25□□□□□ -2.05
PMS1-208ENST00000421722 ATP5EP2Q5VTU8 51 aa2.24□□□□□ -2.05
PMS1-208ENST00000421722 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
PMS1-208ENST00000421722 H3BPC8 53 aa2.23□□□□□ -2.05
PMS1-208ENST00000421722 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
PMS1-208ENST00000421722 HIST1H4AP62805 103 aaKnown RBP2.19□□□□□ -2.06
PMS1-208ENST00000421722 ACYP2P14621 99 aa2.19□□□□□ -2.06
PMS1-208ENST00000421722 KRTAP13-4Q3LI77 160 aa2.18□□□□□ -2.06
PMS1-208ENST00000421722 OCR1Q9BZK8 76 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms