RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 LINC01546A6NGU7 62 aa2.73□□□□□ -1.97
NOD1-203ENST00000413433 NCR3O14931 201 aa2.73□□□□□ -1.97
NOD1-203ENST00000413433 ATP5EP2Q5VTU8 51 aa2.73□□□□□ -1.97
NOD1-203ENST00000413433 FP248Q71RG6 208 aaPredicted RBP2.73□□□□□ -1.97
NOD1-203ENST00000413433 TRAV12-1A0A0B4J245 112 aa2.72□□□□□ -1.97
NOD1-203ENST00000413433 ERC2-IT1O76042 136 aa2.72□□□□□ -1.97
NOD1-203ENST00000413433 SPINK1P00995 79 aa2.72□□□□□ -1.97
NOD1-203ENST00000413433 COX17Q14061 63 aa2.72□□□□□ -1.97
NOD1-203ENST00000413433 TMEM254Q8TBM7 123 aa2.72□□□□□ -1.97
NOD1-203ENST00000413433 TRBV10-3A0A0K0K1G6 114 aa2.71□□□□□ -1.98
NOD1-203ENST00000413433 ETDCA0A1B0GVM5 59 aa2.71□□□□□ -1.98
NOD1-203ENST00000413433 Q1T7F1 81 aa2.71□□□□□ -1.98
NOD1-203ENST00000413433 C9orf92A6NGG3 77 aa2.7□□□□□ -1.98
NOD1-203ENST00000413433 MT1HP80294 61 aa2.7□□□□□ -1.98
NOD1-203ENST00000413433 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
NOD1-203ENST00000413433 FSIP2Q5CZC0 6907 aa2.69□□□□□ -1.98
NOD1-203ENST00000413433 SPRR1AP35321 89 aa2.69□□□□□ -1.98
NOD1-203ENST00000413433 ROMO1P60602 79 aa2.69□□□□□ -1.98
NOD1-203ENST00000413433 PCOTHQ58A44 107 aa2.69□□□□□ -1.98
NOD1-203ENST00000413433 Q6JHZ5 121 aa2.69□□□□□ -1.98
NOD1-203ENST00000413433 KCNQ1DNQ9H478 68 aa2.69□□□□□ -1.98
NOD1-203ENST00000413433 NDUFA12Q9UI09 145 aa2.69□□□□□ -1.98
NOD1-203ENST00000413433 TEX49A0A1B0GTD5 131 aa2.68□□□□□ -1.98
NOD1-203ENST00000413433 RBM3P98179 157 aaKnown RBP2.68□□□□□ -1.98
NOD1-203ENST00000413433 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
NOD1-203ENST00000413433 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
NOD1-203ENST00000413433 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
NOD1-203ENST00000413433 DSCR8Q96T75 97 aa2.68□□□□□ -1.98
NOD1-203ENST00000413433 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
NOD1-203ENST00000413433 ZNF815PA8K554 130 aa2.67□□□□□ -1.98
NOD1-203ENST00000413433 CCKP06307 115 aa2.67□□□□□ -1.98
NOD1-203ENST00000413433 KLKP1Q107X0 134 aa2.67□□□□□ -1.98
NOD1-203ENST00000413433 TRAV13-2A0A0B4J235 113 aa2.66□□□□□ -1.98
NOD1-203ENST00000413433 M0R2T5 61 aa2.66□□□□□ -1.98
NOD1-203ENST00000413433 DNAL4O96015 105 aa2.66□□□□□ -1.98
NOD1-203ENST00000413433 SFTA2Q6UW10 78 aa2.66□□□□□ -1.98
NOD1-203ENST00000413433 Q6ZRX8 168 aa2.66□□□□□ -1.98
NOD1-203ENST00000413433 COA5Q86WW8 74 aa2.66□□□□□ -1.98
NOD1-203ENST00000413433 RPS29P62273 56 aaKnown RBP2.65□□□□□ -1.99
NOD1-203ENST00000413433 ATP11AUNQ6ZP68 121 aa2.64□□□□□ -1.99
NOD1-203ENST00000413433 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
NOD1-203ENST00000413433 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
NOD1-203ENST00000413433 COX6B2Q6YFQ2 88 aa2.63□□□□□ -1.99
NOD1-203ENST00000413433 DEFB105AQ8NG35 78 aa2.63□□□□□ -1.99
NOD1-203ENST00000413433 JMJD7-PLA2G4BH0Y9G9 81 aa2.62□□□□□ -1.99
NOD1-203ENST00000413433 H7BZZ5 65 aa2.62□□□□□ -1.99
NOD1-203ENST00000413433 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
NOD1-203ENST00000413433 UBL5Q9BZL1 73 aa2.62□□□□□ -1.99
NOD1-203ENST00000413433 CYP4F30PQ9H0H9 118 aa2.62□□□□□ -1.99
NOD1-203ENST00000413433 H0YGX0 51 aa2.61□□□□□ -1.99
NOD1-203ENST00000413433 PDE6GP18545 87 aa2.61□□□□□ -1.99
NOD1-203ENST00000413433 C20orf197Q8N268 126 aa2.61□□□□□ -1.99
NOD1-203ENST00000413433 LIMD2Q9BT23 127 aa2.61□□□□□ -1.99
NOD1-203ENST00000413433 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
NOD1-203ENST00000413433 A0A087WSZ3 146 aa2.59□□□□□ -1.99
NOD1-203ENST00000413433 NDUFB1O75438 58 aa2.59□□□□□ -1.99
NOD1-203ENST00000413433 F8WEM9 126 aa2.58□□□□□ -2
NOD1-203ENST00000413433 SPRR1BP22528 89 aa2.58□□□□□ -2
NOD1-203ENST00000413433 COX7BP24311 80 aa2.58□□□□□ -2
NOD1-203ENST00000413433 RPL37P61927 97 aaKnown RBP2.58□□□□□ -2
NOD1-203ENST00000413433 MUSTN1Q8IVN3 82 aa2.58□□□□□ -2
NOD1-203ENST00000413433 LINC00308Q8TCZ7 52 aa2.58□□□□□ -2
NOD1-203ENST00000413433 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
NOD1-203ENST00000413433 OBSCN-AS1Q96MR7 158 aa2.57□□□□□ -2
NOD1-203ENST00000413433 ELOF1P60002 83 aaKnown RBP2.56□□□□□ -2
NOD1-203ENST00000413433 USH2AO75445 5202 aa2.55□□□□□ -2
NOD1-203ENST00000413433 IGKV3D-7A0A0C4DH55 119 aa2.54□□□□□ -2
NOD1-203ENST00000413433 CASC2Q6XLA1 102 aa2.53□□□□□ -2
NOD1-203ENST00000413433 CYSTM1Q9H1C7 97 aa2.53□□□□□ -2
NOD1-203ENST00000413433 LINC00846Q9NV44 126 aa2.53□□□□□ -2
NOD1-203ENST00000413433 ORMDL1Q9P0S3 153 aa2.53□□□□□ -2
NOD1-203ENST00000413433 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
NOD1-203ENST00000413433 IGLV5-48A0A075B6I7 105 aa2.52□□□□□ -2.01
NOD1-203ENST00000413433 CDC42SE1Q9NRR8 79 aa2.52□□□□□ -2.01
NOD1-203ENST00000413433 SNURFQ9Y675 71 aa2.52□□□□□ -2.01
NOD1-203ENST00000413433 TRAV22A0A0B4J277 110 aa2.51□□□□□ -2.01
NOD1-203ENST00000413433 TRBV7-4A0A0J9YYF1 115 aa2.51□□□□□ -2.01
NOD1-203ENST00000413433 CHKB-CPT1BH3BT56 60 aa2.51□□□□□ -2.01
NOD1-203ENST00000413433 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
NOD1-203ENST00000413433 KRTAP13-4Q3LI77 160 aa2.51□□□□□ -2.01
NOD1-203ENST00000413433 SMIM11BQ8TCY0 68 aa2.51□□□□□ -2.01
NOD1-203ENST00000413433 Q96NJ1 140 aa2.51□□□□□ -2.01
NOD1-203ENST00000413433 HCG22E2RYF7 251 aa2.5□□□□□ -2.01
NOD1-203ENST00000413433 NREPQ16612 68 aa2.5□□□□□ -2.01
NOD1-203ENST00000413433 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
NOD1-203ENST00000413433 A0A087WVE0 104 aa2.49□□□□□ -2.01
NOD1-203ENST00000413433 LOC110117498A0A087WWA1 95 aa2.49□□□□□ -2.01
NOD1-203ENST00000413433 A6NN06 94 aa2.49□□□□□ -2.01
NOD1-203ENST00000413433 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.49□□□□□ -2.01
NOD1-203ENST00000413433 SPTSSBQ8NFR3 76 aa2.49□□□□□ -2.01
NOD1-203ENST00000413433 ZCCHC13Q8WW36 166 aaKnown RBP2.49□□□□□ -2.01
NOD1-203ENST00000413433 MT2AP02795 61 aa2.48□□□□□ -2.01
NOD1-203ENST00000413433 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
NOD1-203ENST00000413433 Q6ZQY7 126 aa2.48□□□□□ -2.01
NOD1-203ENST00000413433 LOC101927531A0A1B0GV80 90 aa2.47□□□□□ -2.01
NOD1-203ENST00000413433 MT1FP04733 61 aa2.47□□□□□ -2.01
NOD1-203ENST00000413433 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
NOD1-203ENST00000413433 Q5VV11 94 aa2.44□□□□□ -2.02
NOD1-203ENST00000413433 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
NOD1-203ENST00000413433 LINC00208Q96KT6 92 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms