RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 M0R143 59 aa-1.12□□□□□ -2.59
PMS1-203ENST00000409593 S100A16Q96FQ6 103 aaKnown RBP-1.12□□□□□ -2.59
PMS1-203ENST00000409593 LMTK2Q8IWU2 1503 aa-1.12□□□□□ -2.59
PMS1-203ENST00000409593 KIF21BO75037 1637 aa-1.12□□□□□ -2.59
PMS1-203ENST00000409593 VPS8Q8N3P4 1428 aa-1.12□□□□□ -2.59
PMS1-203ENST00000409593 ABCC6O95255 1503 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 A0A087WXM4 84 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 RPS29P62273 56 aaKnown RBP-1.13□□□□□ -2.59
PMS1-203ENST00000409593 PYY3Q5JQD4 70 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 LEAP2Q969E1 77 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 SNHG12Q9BXW3 62 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 BOD1L1Q8NFC6 3051 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 ZFHX4Q86UP3 3567 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 SMIM13P0DJ93 91 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 DEFB136Q30KP8 78 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 MADDQ8WXG6 1647 aa-1.13□□□□□ -2.59
PMS1-203ENST00000409593 CROCC2H7BZ55 1655 aa-1.14□□□□□ -2.59
PMS1-203ENST00000409593 CSMD2Q7Z408 3487 aa-1.14□□□□□ -2.59
PMS1-203ENST00000409593 TIAM1Q13009 1591 aa-1.14□□□□□ -2.59
PMS1-203ENST00000409593 PEG3Q9GZU2 1588 aa-1.14□□□□□ -2.59
PMS1-203ENST00000409593 KANTRA0A1W2PQU2 76 aa-1.14□□□□□ -2.59
PMS1-203ENST00000409593 DEFB114Q30KQ6 69 aa-1.14□□□□□ -2.59
PMS1-203ENST00000409593 DEFB121Q5J5C9 76 aa-1.15□□□□□ -2.59
PMS1-203ENST00000409593 ENHOQ6UWT2 76 aa-1.15□□□□□ -2.59
PMS1-203ENST00000409593 CFAP74Q9C0B2 1584 aa-1.15□□□□□ -2.59
PMS1-203ENST00000409593 FREM2Q5SZK8 3169 aa-1.16□□□□□ -2.6
PMS1-203ENST00000409593 ABCC1P33527 1531 aa-1.16□□□□□ -2.6
PMS1-203ENST00000409593 PKIAP61925 76 aa-1.16□□□□□ -2.6
PMS1-203ENST00000409593 DCAF1Q9Y4B6 1507 aa-1.16□□□□□ -2.6
PMS1-203ENST00000409593 GLI2P10070 1586 aa-1.17□□□□□ -2.6
PMS1-203ENST00000409593 PRUNE2Q8WUY3 3088 aa-1.17□□□□□ -2.6
PMS1-203ENST00000409593 CRYBG3Q68DQ2 2970 aa-1.17□□□□□ -2.6
PMS1-203ENST00000409593 UACAQ9BZF9 1416 aa-1.17□□□□□ -2.6
PMS1-203ENST00000409593 RRBP1Q9P2E9 1410 aaKnown RBP-1.18□□□□□ -2.6
PMS1-203ENST00000409593 S100A8P05109 93 aa-1.18□□□□□ -2.6
PMS1-203ENST00000409593 ABRACLQ9P1F3 81 aa-1.19□□□□□ -2.6
PMS1-203ENST00000409593 KAAG1Q9UBP8 84 aa-1.19□□□□□ -2.6
PMS1-203ENST00000409593 V9GYS6 101 aa-1.19□□□□□ -2.6
PMS1-203ENST00000409593 ANKARQ7Z5J8 1434 aa-1.19□□□□□ -2.6
PMS1-203ENST00000409593 CENPEQ02224 2701 aa-1.19□□□□□ -2.6
PMS1-203ENST00000409593 Q9H521 79 aa-1.2□□□□□ -2.6
PMS1-203ENST00000409593 TDRG1Q3Y452 100 aa-1.2□□□□□ -2.6
PMS1-203ENST00000409593 WDFY4Q6ZS81 3184 aa-1.2□□□□□ -2.6
PMS1-203ENST00000409593 H3BUT2 72 aa-1.21□□□□□ -2.6
PMS1-203ENST00000409593 ALS2Q96Q42 1657 aa-1.21□□□□□ -2.6
PMS1-203ENST00000409593 ST20Q9HBF5 79 aa-1.22□□□□□ -2.6
PMS1-203ENST00000409593 ADIRFQ15847 76 aa-1.23□□□□□ -2.61
PMS1-203ENST00000409593 DCHS1Q96JQ0 3298 aa-1.23□□□□□ -2.61
PMS1-203ENST00000409593 ABCA8O94911 1581 aa-1.23□□□□□ -2.61
PMS1-203ENST00000409593 H3BVH4 76 aa-1.23□□□□□ -2.61
PMS1-203ENST00000409593 SMIM27A0A1W2PRY6 76 aa-1.24□□□□□ -2.61
PMS1-203ENST00000409593 POLR2KP53803 58 aaKnown RBP-1.24□□□□□ -2.61
PMS1-203ENST00000409593 UNC80Q8N2C7 3258 aa-1.25□□□□□ -2.61
PMS1-203ENST00000409593 WFDC10BQ8IUB3 73 aa-1.25□□□□□ -2.61
PMS1-203ENST00000409593 CFAP54Q96N23 3096 aa-1.25□□□□□ -2.61
PMS1-203ENST00000409593 MROH2AA6NES4 1674 aa-1.25□□□□□ -2.61
PMS1-203ENST00000409593 EEA1Q15075 1411 aa-1.25□□□□□ -2.61
PMS1-203ENST00000409593 ABCA9Q8IUA7 1624 aa-1.25□□□□□ -2.61
PMS1-203ENST00000409593 CCDC180Q9P1Z9 1646 aa-1.25□□□□□ -2.61
PMS1-203ENST00000409593 K7EMI3 77 aa-1.26□□□□□ -2.61
PMS1-203ENST00000409593 ATXN8Q156A1 80 aa-1.26□□□□□ -2.61
PMS1-203ENST00000409593 TMEM167BQ9NRX6 74 aa-1.26□□□□□ -2.61
PMS1-203ENST00000409593 S100A13Q99584 98 aa-1.26□□□□□ -2.61
PMS1-203ENST00000409593 EFCAB6Q5THR3 1501 aa-1.27□□□□□ -2.61
PMS1-203ENST00000409593 DMDP11532 3685 aa-1.27□□□□□ -2.61
PMS1-203ENST00000409593 C18orf32Q8TCD1 76 aa-1.27□□□□□ -2.61
PMS1-203ENST00000409593 LINC00308Q8TCZ7 52 aa-1.27□□□□□ -2.61
PMS1-203ENST00000409593 EP400Q96L91 3159 aa-1.27□□□□□ -2.61
PMS1-203ENST00000409593 VPS13CQ709C8 3753 aa-1.28□□□□□ -2.61
PMS1-203ENST00000409593 ABCA6Q8N139 1617 aa-1.28□□□□□ -2.61
PMS1-203ENST00000409593 SPEGQ15772 3267 aa-1.29□□□□□ -2.62
PMS1-203ENST00000409593 LMO7Q8WWI1 1683 aa-1.29□□□□□ -2.62
PMS1-203ENST00000409593 DEFB131AP59861 70 aa-1.29□□□□□ -2.62
PMS1-203ENST00000409593 RB1CC1Q8TDY2 1594 aa-1.3□□□□□ -2.62
PMS1-203ENST00000409593 M0R1W7 72 aa-1.3□□□□□ -2.62
PMS1-203ENST00000409593 NMES1Q9C002 83 aa-1.3□□□□□ -2.62
PMS1-203ENST00000409593 HILPDAQ9Y5L2 63 aa-1.3□□□□□ -2.62
PMS1-203ENST00000409593 IQGAP3Q86VI3 1631 aa-1.3□□□□□ -2.62
PMS1-203ENST00000409593 DUOX2Q9NRD8 1548 aa-1.3□□□□□ -2.62
PMS1-203ENST00000409593 PCNTO95613 3336 aa-1.31□□□□□ -2.62
PMS1-203ENST00000409593 LOC400499M0QZD8 3231 aa-1.31□□□□□ -2.62
PMS1-203ENST00000409593 FRYLO94915 3013 aa-1.32□□□□□ -2.62
PMS1-203ENST00000409593 CCDC18Q5T9S5 1454 aa-1.32□□□□□ -2.62
PMS1-203ENST00000409593 GNG13Q9P2W3 67 aa-1.32□□□□□ -2.62
PMS1-203ENST00000409593 SYCP2Q9BX26 1530 aa-1.32□□□□□ -2.62
PMS1-203ENST00000409593 UGGT1Q9NYU2 1555 aa-1.32□□□□□ -2.62
PMS1-203ENST00000409593 WDFY3Q8IZQ1 3526 aa-1.32□□□□□ -2.62
PMS1-203ENST00000409593 SERF2P84101 59 aa-1.32□□□□□ -2.62
PMS1-203ENST00000409593 NRXN3Q9Y4C0 1643 aa-1.33□□□□□ -2.62
PMS1-203ENST00000409593 LINC01549A6NIU2 74 aa-1.33□□□□□ -2.62
PMS1-203ENST00000409593 AGLP35573 1532 aa-1.34□□□□□ -2.62
PMS1-203ENST00000409593 CEP350Q5VT06 3117 aa-1.34□□□□□ -2.62
PMS1-203ENST00000409593 IGIPA6NJ69 53 aa-1.35□□□□□ -2.63
PMS1-203ENST00000409593 UGGT2Q9NYU1 1516 aa-1.35□□□□□ -2.63
PMS1-203ENST00000409593 SCRIBQ14160 1630 aa-1.36□□□□□ -2.63
PMS1-203ENST00000409593 CEP250Q9BV73 2442 aa-1.36□□□□□ -2.63
PMS1-203ENST00000409593 S100ZQ8WXG8 99 aa-1.36□□□□□ -2.63
PMS1-203ENST00000409593 SZT2Q5T011 3432 aa-1.37□□□□□ -2.63
PMS1-203ENST00000409593 H0YGX0 51 aa-1.39□□□□□ -2.63
PMS1-203ENST00000409593 GNG2P59768 71 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms