RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 MAP1AP78559 2803 aaPredicted RBP2.6□□□□□ -1.99
CNGA1-202ENST00000402813 PRKDCP78527 4128 aaKnown RBP2.6□□□□□ -1.99
CNGA1-202ENST00000402813 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
CNGA1-202ENST00000402813 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -1.99
CNGA1-202ENST00000402813 MXRA5Q9NR99 2828 aa2.59□□□□□ -1.99
CNGA1-202ENST00000402813 MT3P25713 68 aa2.59□□□□□ -1.99
CNGA1-202ENST00000402813 CMYA5Q8N3K9 4069 aa2.59□□□□□ -2
CNGA1-202ENST00000402813 MEGF8Q7Z7M0 2845 aa2.58□□□□□ -2
CNGA1-202ENST00000402813 HIVEP2P31629 2446 aa2.58□□□□□ -2
CNGA1-202ENST00000402813 PRRC2CQ9Y520 2896 aaKnown RBP2.57□□□□□ -2
CNGA1-202ENST00000402813 TGP01266 2768 aa2.57□□□□□ -2
CNGA1-202ENST00000402813 DNAH10Q8IVF4 4471 aa2.56□□□□□ -2
CNGA1-202ENST00000402813 DNAH8Q96JB1 4490 aa2.56□□□□□ -2
CNGA1-202ENST00000402813 KRTAP10-1P60331 282 aa2.56□□□□□ -2
CNGA1-202ENST00000402813 LCE1FQ5T754 118 aa2.55□□□□□ -2
CNGA1-202ENST00000402813 CSMD2Q7Z408 3487 aa2.53□□□□□ -2
CNGA1-202ENST00000402813 TACC2O95359 2948 aa2.53□□□□□ -2
CNGA1-202ENST00000402813 LCE1AQ5T7P2 110 aa2.53□□□□□ -2
CNGA1-202ENST00000402813 SACSQ9NZJ4 4579 aa2.52□□□□□ -2.01
CNGA1-202ENST00000402813 DNAH7Q8WXX0 4024 aa2.52□□□□□ -2.01
CNGA1-202ENST00000402813 RYR3Q15413 4870 aa2.52□□□□□ -2.01
CNGA1-202ENST00000402813 FLG2Q5D862 2391 aaPredicted RBP2.52□□□□□ -2.01
CNGA1-202ENST00000402813 DNAH2Q9P225 4427 aa2.51□□□□□ -2.01
CNGA1-202ENST00000402813 MGAM2Q2M2H8 2515 aa2.5□□□□□ -2.01
CNGA1-202ENST00000402813 M0QZ58 72 aa2.5□□□□□ -2.01
CNGA1-202ENST00000402813 HECTD4Q9Y4D8 3996 aa2.5□□□□□ -2.01
CNGA1-202ENST00000402813 FAT3Q8TDW7 4589 aa2.49□□□□□ -2.01
CNGA1-202ENST00000402813 PCLOQ9Y6V0 5065 aa2.49□□□□□ -2.01
CNGA1-202ENST00000402813 KMT2CQ8NEZ4 4911 aaKnown RBP2.48□□□□□ -2.01
CNGA1-202ENST00000402813 TENM2Q9NT68 2774 aa2.48□□□□□ -2.01
CNGA1-202ENST00000402813 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
CNGA1-202ENST00000402813 SONP18583 2426 aaKnown RBP2.48□□□□□ -2.01
CNGA1-202ENST00000402813 KRTAP10-6P60371 365 aaPredicted RBP2.47□□□□□ -2.01
CNGA1-202ENST00000402813 DNAH9Q9NYC9 4486 aa2.47□□□□□ -2.01
CNGA1-202ENST00000402813 SVEP1Q4LDE5 3571 aa2.46□□□□□ -2.02
CNGA1-202ENST00000402813 TENM1Q9UKZ4 2725 aa2.45□□□□□ -2.02
CNGA1-202ENST00000402813 ZNF469Q96JG9 3925 aaPredicted RBP2.44□□□□□ -2.02
CNGA1-202ENST00000402813 Q5VSD8 79 aa2.44□□□□□ -2.02
CNGA1-202ENST00000402813 CUBNO60494 3623 aa2.44□□□□□ -2.02
CNGA1-202ENST00000402813 VPS13CQ709C8 3753 aa2.44□□□□□ -2.02
CNGA1-202ENST00000402813 EPPK1P58107 5090 aaKnown RBP2.43□□□□□ -2.02
CNGA1-202ENST00000402813 HERC2O95714 4834 aa2.43□□□□□ -2.02
CNGA1-202ENST00000402813 DNAH11Q96DT5 4516 aa2.42□□□□□ -2.02
CNGA1-202ENST00000402813 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
CNGA1-202ENST00000402813 TRRAPQ9Y4A5 3859 aa2.41□□□□□ -2.02
CNGA1-202ENST00000402813 ZANQ9Y493 2812 aa2.41□□□□□ -2.02
CNGA1-202ENST00000402813 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
CNGA1-202ENST00000402813 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.02
CNGA1-202ENST00000402813 HYDINQ4G0P3 5121 aa2.4□□□□□ -2.02
CNGA1-202ENST00000402813 PKHD1P08F94 4074 aa2.4□□□□□ -2.03
CNGA1-202ENST00000402813 VWFP04275 2813 aa2.39□□□□□ -2.03
CNGA1-202ENST00000402813 S4R3F8 94 aa2.39□□□□□ -2.03
CNGA1-202ENST00000402813 RYR1P21817 5038 aa2.39□□□□□ -2.03
CNGA1-202ENST00000402813 RYR2Q92736 4967 aa2.38□□□□□ -2.03
CNGA1-202ENST00000402813 FRAS1Q86XX4 4008 aa2.37□□□□□ -2.03
CNGA1-202ENST00000402813 PLECQ15149 4684 aaKnown RBP2.36□□□□□ -2.03
CNGA1-202ENST00000402813 TENM3Q9P273 2699 aa2.36□□□□□ -2.03
CNGA1-202ENST00000402813 FAT2Q9NYQ8 4349 aa2.35□□□□□ -2.03
CNGA1-202ENST00000402813 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
CNGA1-202ENST00000402813 DYNC1H1Q14204 4646 aaKnown RBP2.34□□□□□ -2.03
CNGA1-202ENST00000402813 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
CNGA1-202ENST00000402813 TNXBP22105 4242 aa2.32□□□□□ -2.04
CNGA1-202ENST00000402813 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
CNGA1-202ENST00000402813 UBR4Q5T4S7 5183 aa2.31□□□□□ -2.04
CNGA1-202ENST00000402813 LYSTQ99698 3801 aa2.31□□□□□ -2.04
CNGA1-202ENST00000402813 PKD1P98161 4303 aa2.3□□□□□ -2.04
CNGA1-202ENST00000402813 HSPG2P98160 4391 aa2.29□□□□□ -2.04
CNGA1-202ENST00000402813 C9orf92A6NGG3 77 aa2.29□□□□□ -2.04
CNGA1-202ENST00000402813 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CNGA1-202ENST00000402813 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
CNGA1-202ENST00000402813 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
CNGA1-202ENST00000402813 APOBP04114 4563 aaKnown RBP2.28□□□□□ -2.04
CNGA1-202ENST00000402813 SRRM2Q9UQ35 2752 aaKnown RBP2.27□□□□□ -2.05
CNGA1-202ENST00000402813 DNAH5Q8TE73 4624 aa2.27□□□□□ -2.05
CNGA1-202ENST00000402813 KIAA1109Q2LD37 5005 aa2.27□□□□□ -2.05
CNGA1-202ENST00000402813 COL7A1Q02388 2944 aa2.26□□□□□ -2.05
CNGA1-202ENST00000402813 VPS13BQ7Z7G8 4022 aa2.25□□□□□ -2.05
CNGA1-202ENST00000402813 KRTAP10-12P60413 245 aa2.25□□□□□ -2.05
CNGA1-202ENST00000402813 STAB2Q8WWQ8 2551 aa2.25□□□□□ -2.05
CNGA1-202ENST00000402813 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
CNGA1-202ENST00000402813 CSMD3Q7Z407 3707 aa2.22□□□□□ -2.05
CNGA1-202ENST00000402813 FAT1Q14517 4588 aa2.2□□□□□ -2.06
CNGA1-202ENST00000402813 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
CNGA1-202ENST00000402813 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
CNGA1-202ENST00000402813 KRTAP10-7P60409 375 aaPredicted RBP2.19□□□□□ -2.06
CNGA1-202ENST00000402813 ABCA13Q86UQ4 5058 aa2.18□□□□□ -2.06
CNGA1-202ENST00000402813 A0A0D9SG42 100 aa2.18□□□□□ -2.06
CNGA1-202ENST00000402813 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
CNGA1-202ENST00000402813 TNP1P09430 55 aa2.16□□□□□ -2.06
CNGA1-202ENST00000402813 LRP1Q07954 4544 aaKnown RBP2.16□□□□□ -2.06
CNGA1-202ENST00000402813 HERC1Q15751 4861 aa2.16□□□□□ -2.06
CNGA1-202ENST00000402813 MT1HL1P0DM35 61 aa2.16□□□□□ -2.06
CNGA1-202ENST00000402813 LRP1BQ9NZR2 4599 aa2.14□□□□□ -2.07
CNGA1-202ENST00000402813 FLGP20930 4061 aaPredicted RBP2.14□□□□□ -2.07
CNGA1-202ENST00000402813 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
CNGA1-202ENST00000402813 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
CNGA1-202ENST00000402813 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
CNGA1-202ENST00000402813 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
CNGA1-202ENST00000402813 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
CNGA1-202ENST00000402813 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms