RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
TSC2-204ENST00000401874 DYNC2H1Q8NCM8 4307 aaKnown RBP7.34□□□□□ -1.23
TSC2-204ENST00000401874 ALMS1Q8TCU4 4167 aa7.27□□□□□ -1.24
TSC2-204ENST00000401874 COL7A1Q02388 2944 aa7.27□□□□□ -1.25
TSC2-204ENST00000401874 DNAH10Q8IVF4 4471 aa7.27□□□□□ -1.25
TSC2-204ENST00000401874 PLECQ15149 4684 aaKnown RBP7.23□□□□□ -1.25
TSC2-204ENST00000401874 KRTAP4-5Q9BYR2 181 aa7.21□□□□□ -1.26
TSC2-204ENST00000401874 VPS13DQ5THJ4 4388 aa7.2□□□□□ -1.26
TSC2-204ENST00000401874 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
TSC2-204ENST00000401874 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
TSC2-204ENST00000401874 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
TSC2-204ENST00000401874 LYSTQ99698 3801 aa7.11□□□□□ -1.27
TSC2-204ENST00000401874 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
TSC2-204ENST00000401874 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
TSC2-204ENST00000401874 STARD9Q9P2P6 4700 aa7.09□□□□□ -1.27
TSC2-204ENST00000401874 DNAH6Q9C0G6 4158 aa7.03□□□□□ -1.28
TSC2-204ENST00000401874 CSMD3Q7Z407 3707 aa7.01□□□□□ -1.29
TSC2-204ENST00000401874 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
TSC2-204ENST00000401874 HECTD4Q9Y4D8 3996 aa6.99□□□□□ -1.29
TSC2-204ENST00000401874 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
TSC2-204ENST00000401874 DNAH5Q8TE73 4624 aa6.94□□□□□ -1.3
TSC2-204ENST00000401874 DNAH8Q96JB1 4490 aa6.94□□□□□ -1.3
TSC2-204ENST00000401874 KMT2AQ03164 3969 aa6.92□□□□□ -1.3
TSC2-204ENST00000401874 CRCT1Q9UGL9 99 aa6.92□□□□□ -1.3
TSC2-204ENST00000401874 DNAH11Q96DT5 4516 aa6.85□□□□□ -1.31
TSC2-204ENST00000401874 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
TSC2-204ENST00000401874 KRTAP4-1Q9BYQ7 146 aa6.8□□□□□ -1.32
TSC2-204ENST00000401874 DNHD1Q96M86 4753 aa6.77□□□□□ -1.33
TSC2-204ENST00000401874 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
TSC2-204ENST00000401874 PKD1P98161 4303 aa6.67□□□□□ -1.34
TSC2-204ENST00000401874 LRP1BQ9NZR2 4599 aa6.66□□□□□ -1.34
TSC2-204ENST00000401874 FAT2Q9NYQ8 4349 aa6.66□□□□□ -1.34
TSC2-204ENST00000401874 MT1HP80294 61 aa6.65□□□□□ -1.35
TSC2-204ENST00000401874 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
TSC2-204ENST00000401874 VPS13BQ7Z7G8 4022 aa6.61□□□□□ -1.35
TSC2-204ENST00000401874 SACSQ9NZJ4 4579 aa6.6□□□□□ -1.35
TSC2-204ENST00000401874 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
TSC2-204ENST00000401874 MT2AP02795 61 aa6.59□□□□□ -1.35
TSC2-204ENST00000401874 HYDINQ4G0P3 5121 aa6.58□□□□□ -1.36
TSC2-204ENST00000401874 KRTAP10-5P60370 271 aa6.56□□□□□ -1.36
TSC2-204ENST00000401874 FAT1Q14517 4588 aa6.46□□□□□ -1.37
TSC2-204ENST00000401874 MT1FP04733 61 aa6.45□□□□□ -1.38
TSC2-204ENST00000401874 APOBP04114 4563 aaKnown RBP6.43□□□□□ -1.38
TSC2-204ENST00000401874 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
TSC2-204ENST00000401874 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
TSC2-204ENST00000401874 PKHD1P08F94 4074 aa6.36□□□□□ -1.39
TSC2-204ENST00000401874 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
TSC2-204ENST00000401874 RYR2Q92736 4967 aa6.33□□□□□ -1.4
TSC2-204ENST00000401874 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
TSC2-204ENST00000401874 RYR1P21817 5038 aa6.28□□□□□ -1.4
TSC2-204ENST00000401874 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
TSC2-204ENST00000401874 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
TSC2-204ENST00000401874 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
TSC2-204ENST00000401874 TNXBP22105 4242 aa6.17□□□□□ -1.42
TSC2-204ENST00000401874 HSPG2P98160 4391 aa6.15□□□□□ -1.43
TSC2-204ENST00000401874 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
TSC2-204ENST00000401874 KRTAP17-1Q9BYP8 105 aa6.11□□□□□ -1.43
TSC2-204ENST00000401874 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
TSC2-204ENST00000401874 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
TSC2-204ENST00000401874 RYR3Q15413 4870 aa6.05□□□□□ -1.44
TSC2-204ENST00000401874 MT1XP80297 61 aa6.04□□□□□ -1.44
TSC2-204ENST00000401874 KMT2CQ8NEZ4 4911 aaKnown RBP6.02□□□□□ -1.45
TSC2-204ENST00000401874 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
TSC2-204ENST00000401874 MT1BP07438 61 aa5.96□□□□□ -1.46
TSC2-204ENST00000401874 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
TSC2-204ENST00000401874 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
TSC2-204ENST00000401874 KIAA1109Q2LD37 5005 aa5.9□□□□□ -1.47
TSC2-204ENST00000401874 HERC1Q15751 4861 aa5.89□□□□□ -1.47
TSC2-204ENST00000401874 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
TSC2-204ENST00000401874 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
TSC2-204ENST00000401874 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
TSC2-204ENST00000401874 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
TSC2-204ENST00000401874 MT1GP13640 62 aa5.72□□□□□ -1.49
TSC2-204ENST00000401874 EPPK1P58107 5090 aaKnown RBP5.72□□□□□ -1.49
TSC2-204ENST00000401874 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
TSC2-204ENST00000401874 HERC2O95714 4834 aa5.7□□□□□ -1.5
TSC2-204ENST00000401874 LRP2P98164 4655 aa5.69□□□□□ -1.5
TSC2-204ENST00000401874 LPAP08519 4548 aa5.69□□□□□ -1.5
TSC2-204ENST00000401874 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
TSC2-204ENST00000401874 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
TSC2-204ENST00000401874 SPRR2EP22531 72 aa5.66□□□□□ -1.5
TSC2-204ENST00000401874 SPRR2BP35325 72 aa5.66□□□□□ -1.5
TSC2-204ENST00000401874 SPRR2AP35326 72 aa5.66□□□□□ -1.5
TSC2-204ENST00000401874 MUC17Q685J3 4493 aa5.64□□□□□ -1.51
TSC2-204ENST00000401874 KRTAP19-2Q3LHN2 52 aa5.57□□□□□ -1.52
TSC2-204ENST00000401874 LCE2BO14633 110 aa5.51□□□□□ -1.53
TSC2-204ENST00000401874 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
TSC2-204ENST00000401874 LCE3DQ9BYE3 92 aa5.49□□□□□ -1.53
TSC2-204ENST00000401874 SPRR2DP22532 72 aa5.48□□□□□ -1.53
TSC2-204ENST00000401874 MT1LQ93083 61 aa5.48□□□□□ -1.53
TSC2-204ENST00000401874 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
TSC2-204ENST00000401874 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
TSC2-204ENST00000401874 MT1EP04732 61 aa5.42□□□□□ -1.54
TSC2-204ENST00000401874 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.55
TSC2-204ENST00000401874 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
TSC2-204ENST00000401874 FLGP20930 4061 aaPredicted RBP5.37□□□□□ -1.55
TSC2-204ENST00000401874 MT1MQ8N339 61 aa5.23□□□□□ -1.57
TSC2-204ENST00000401874 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
TSC2-204ENST00000401874 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.58
TSC2-204ENST00000401874 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms