RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PKD1P98161 4303 aa1.56□□□□□ -2.16
TRAV41-201ENST00000390468 A0A087WTM6 91 aa1.56□□□□□ -2.16
TRAV41-201ENST00000390468 Q5W150 140 aa1.56□□□□□ -2.16
TRAV41-201ENST00000390468 Q6ZRN7 208 aaPredicted RBP1.56□□□□□ -2.16
TRAV41-201ENST00000390468 MRPL34Q9BQ48 92 aaKnown RBP1.56□□□□□ -2.16
TRAV41-201ENST00000390468 FAT2Q9NYQ8 4349 aa1.56□□□□□ -2.16
TRAV41-201ENST00000390468 A0A096LNI7 61 aa1.55□□□□□ -2.16
TRAV41-201ENST00000390468 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
TRAV41-201ENST00000390468 ANAPC11Q9NYG5 84 aa1.55□□□□□ -2.16
TRAV41-201ENST00000390468 RYR2Q92736 4967 aa1.55□□□□□ -2.16
TRAV41-201ENST00000390468 A0A1B0GVX0 72 aa1.54□□□□□ -2.16
TRAV41-201ENST00000390468 FAM168BA1KXE4 195 aa1.54□□□□□ -2.16
TRAV41-201ENST00000390468 SPRR1AP35321 89 aa1.54□□□□□ -2.16
TRAV41-201ENST00000390468 KRTAP10-12P60413 245 aa1.54□□□□□ -2.16
TRAV41-201ENST00000390468 LINC00304Q8N9R0 145 aa1.54□□□□□ -2.16
TRAV41-201ENST00000390468 PKHD1L1Q86WI1 4243 aa1.54□□□□□ -2.16
TRAV41-201ENST00000390468 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
TRAV41-201ENST00000390468 A0A1W2PNN7 141 aa1.53□□□□□ -2.16
TRAV41-201ENST00000390468 KRTAP4-16G5E9R7 235 aaPredicted RBP1.53□□□□□ -2.16
TRAV41-201ENST00000390468 SPACA4Q8TDM5 124 aa1.53□□□□□ -2.16
TRAV41-201ENST00000390468 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.17
TRAV41-201ENST00000390468 LRP1BQ9NZR2 4599 aa1.52□□□□□ -2.17
TRAV41-201ENST00000390468 FBN3Q75N90 2809 aa1.52□□□□□ -2.17
TRAV41-201ENST00000390468 KRTAP11-1Q8IUC1 163 aa1.52□□□□□ -2.17
TRAV41-201ENST00000390468 CIRBP-AS1Q8TBR5 109 aa1.52□□□□□ -2.17
TRAV41-201ENST00000390468 DYNC1H1Q14204 4646 aaKnown RBP1.52□□□□□ -2.17
TRAV41-201ENST00000390468 PANO1I0J062 215 aa1.51□□□□□ -2.17
TRAV41-201ENST00000390468 SPRR1BP22528 89 aa1.51□□□□□ -2.17
TRAV41-201ENST00000390468 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
TRAV41-201ENST00000390468 KRTAP7-1Q8IUC3 87 aa1.51□□□□□ -2.17
TRAV41-201ENST00000390468 Q96NJ1 140 aa1.51□□□□□ -2.17
TRAV41-201ENST00000390468 CRIPTQ9P021 101 aa1.51□□□□□ -2.17
TRAV41-201ENST00000390468 PSORS1C2Q9UIG4 136 aa1.51□□□□□ -2.17
TRAV41-201ENST00000390468 APOBP04114 4563 aaKnown RBP1.51□□□□□ -2.17
TRAV41-201ENST00000390468 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
TRAV41-201ENST00000390468 OBSCNQ5VST9 7968 aa1.5□□□□□ -2.17
TRAV41-201ENST00000390468 A0A1B0GU33 70 aa1.5□□□□□ -2.17
TRAV41-201ENST00000390468 PRLHP81277 87 aa1.5□□□□□ -2.17
TRAV41-201ENST00000390468 KMT2CQ8NEZ4 4911 aaKnown RBP1.5□□□□□ -2.17
TRAV41-201ENST00000390468 KRTAP10-1P60331 282 aa1.49□□□□□ -2.17
TRAV41-201ENST00000390468 COX6B2Q6YFQ2 88 aa1.49□□□□□ -2.17
TRAV41-201ENST00000390468 Q6ZSA8 131 aa1.49□□□□□ -2.17
TRAV41-201ENST00000390468 RYR3Q15413 4870 aa1.48□□□□□ -2.17
TRAV41-201ENST00000390468 A0A0G2JQZ4 141 aa1.48□□□□□ -2.17
TRAV41-201ENST00000390468 A0A1B0GVY2 172 aa1.48□□□□□ -2.17
TRAV41-201ENST00000390468 H0YAA0 97 aa1.48□□□□□ -2.17
TRAV41-201ENST00000390468 H1FX-AS1Q4G0G2 97 aa1.48□□□□□ -2.17
TRAV41-201ENST00000390468 RYR1P21817 5038 aa1.47□□□□□ -2.17
TRAV41-201ENST00000390468 SPINK1P00995 79 aa1.47□□□□□ -2.17
TRAV41-201ENST00000390468 LCE3CQ5T5A8 94 aa1.47□□□□□ -2.17
TRAV41-201ENST00000390468 KRTAP13-1Q8IUC0 172 aa1.47□□□□□ -2.17
TRAV41-201ENST00000390468 RPL37P61927 97 aaKnown RBP1.46□□□□□ -2.18
TRAV41-201ENST00000390468 KRTAP13-3Q3SY46 172 aa1.46□□□□□ -2.18
TRAV41-201ENST00000390468 KRTAP4-3Q9BYR4 195 aa1.46□□□□□ -2.18
TRAV41-201ENST00000390468 TNXBP22105 4242 aa1.45□□□□□ -2.18
TRAV41-201ENST00000390468 EPPK1P58107 5090 aaKnown RBP1.45□□□□□ -2.18
TRAV41-201ENST00000390468 HSPG2P98160 4391 aa1.45□□□□□ -2.18
TRAV41-201ENST00000390468 SMR3BP02814 79 aaPredicted RBP1.45□□□□□ -2.18
TRAV41-201ENST00000390468 SPINK6Q6UWN8 80 aa1.45□□□□□ -2.18
TRAV41-201ENST00000390468 FAT3Q8TDW7 4589 aa1.45□□□□□ -2.18
TRAV41-201ENST00000390468 FAT1Q14517 4588 aa1.44□□□□□ -2.18
TRAV41-201ENST00000390468 Q5VSD8 79 aa1.43□□□□□ -2.18
TRAV41-201ENST00000390468 TYMSOSQ8TAI1 123 aa1.43□□□□□ -2.18
TRAV41-201ENST00000390468 KRTAP1-4P0C5Y4 121 aa1.42□□□□□ -2.18
TRAV41-201ENST00000390468 TPRXLQ17RH7 258 aa1.42□□□□□ -2.18
TRAV41-201ENST00000390468 KRTAP13-2Q52LG2 175 aa1.42□□□□□ -2.18
TRAV41-201ENST00000390468 PLAC4Q8WY50 150 aa1.42□□□□□ -2.18
TRAV41-201ENST00000390468 BIRC6Q9NR09 4857 aa1.41□□□□□ -2.18
TRAV41-201ENST00000390468 KIAA1109Q2LD37 5005 aa1.41□□□□□ -2.18
TRAV41-201ENST00000390468 SRRM2Q9UQ35 2752 aaKnown RBP1.4□□□□□ -2.19
TRAV41-201ENST00000390468 FLG2Q5D862 2391 aaPredicted RBP1.4□□□□□ -2.19
TRAV41-201ENST00000390468 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
TRAV41-201ENST00000390468 PRO2289Q9P1D8 64 aa1.4□□□□□ -2.19
TRAV41-201ENST00000390468 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
TRAV41-201ENST00000390468 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
TRAV41-201ENST00000390468 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
TRAV41-201ENST00000390468 LCE3AQ5TA76 89 aa1.39□□□□□ -2.19
TRAV41-201ENST00000390468 C10orf95Q9H7T3 257 aa1.39□□□□□ -2.19
TRAV41-201ENST00000390468 MYCBP2O75592 4640 aa1.39□□□□□ -2.19
TRAV41-201ENST00000390468 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
TRAV41-201ENST00000390468 A0A0D9SG42 100 aa1.37□□□□□ -2.19
TRAV41-201ENST00000390468 INE1O15225 51 aa1.36□□□□□ -2.19
TRAV41-201ENST00000390468 S4R3F8 94 aa1.36□□□□□ -2.19
TRAV41-201ENST00000390468 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
TRAV41-201ENST00000390468 HERC2O95714 4834 aa1.35□□□□□ -2.19
TRAV41-201ENST00000390468 C9orf92A6NGG3 77 aa1.35□□□□□ -2.19
TRAV41-201ENST00000390468 KRTAP10-8P60410 259 aa1.35□□□□□ -2.19
TRAV41-201ENST00000390468 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
TRAV41-201ENST00000390468 R4GN34 69 aa1.35□□□□□ -2.19
TRAV41-201ENST00000390468 PCLOQ9Y6V0 5065 aa1.34□□□□□ -2.19
TRAV41-201ENST00000390468 MT1HL1P0DM35 61 aa1.34□□□□□ -2.19
TRAV41-201ENST00000390468 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.19
TRAV41-201ENST00000390468 PP632Q6XCG6 107 aa1.34□□□□□ -2.19
TRAV41-201ENST00000390468 KRTAP12-2P59991 146 aa1.32□□□□□ -2.2
TRAV41-201ENST00000390468 LPAP08519 4548 aa1.32□□□□□ -2.2
TRAV41-201ENST00000390468 HERC1Q15751 4861 aa1.32□□□□□ -2.2
TRAV41-201ENST00000390468 M0QZ58 72 aa1.3□□□□□ -2.2
TRAV41-201ENST00000390468 LRP2P98164 4655 aa1.29□□□□□ -2.2
TRAV41-201ENST00000390468 KRTAP12-1P59990 96 aa1.28□□□□□ -2.2
TRAV41-201ENST00000390468 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms