RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
HIPK1-202ENST00000361587 SRRM2Q9UQ35 2752 aaKnown RBP4.49□□□□□ -1.69
HIPK1-202ENST00000361587 PLECQ15149 4684 aaKnown RBP4.46□□□□□ -1.7
HIPK1-202ENST00000361587 VPS13DQ5THJ4 4388 aa4.46□□□□□ -1.7
HIPK1-202ENST00000361587 DNAH1Q9P2D7 4330 aa4.45□□□□□ -1.7
HIPK1-202ENST00000361587 DNAH3Q8TD57 4116 aa4.42□□□□□ -1.7
HIPK1-202ENST00000361587 ANK2Q01484 3957 aa4.42□□□□□ -1.7
HIPK1-202ENST00000361587 DNAH17Q9UFH2 4485 aa4.41□□□□□ -1.7
HIPK1-202ENST00000361587 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
HIPK1-202ENST00000361587 DNAH10Q8IVF4 4471 aa4.37□□□□□ -1.71
HIPK1-202ENST00000361587 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
HIPK1-202ENST00000361587 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
HIPK1-202ENST00000361587 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
HIPK1-202ENST00000361587 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
HIPK1-202ENST00000361587 CMYA5Q8N3K9 4069 aa4.33□□□□□ -1.72
HIPK1-202ENST00000361587 DYNC2H1Q8NCM8 4307 aaKnown RBP4.32□□□□□ -1.72
HIPK1-202ENST00000361587 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
HIPK1-202ENST00000361587 COL7A1Q02388 2944 aa4.3□□□□□ -1.72
HIPK1-202ENST00000361587 DNAH11Q96DT5 4516 aa4.28□□□□□ -1.72
HIPK1-202ENST00000361587 CSMD3Q7Z407 3707 aa4.27□□□□□ -1.73
HIPK1-202ENST00000361587 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
HIPK1-202ENST00000361587 DNAH8Q96JB1 4490 aa4.27□□□□□ -1.73
HIPK1-202ENST00000361587 DNAH6Q9C0G6 4158 aa4.26□□□□□ -1.73
HIPK1-202ENST00000361587 PRKDCP78527 4128 aaKnown RBP4.25□□□□□ -1.73
HIPK1-202ENST00000361587 DNHD1Q96M86 4753 aa4.23□□□□□ -1.73
HIPK1-202ENST00000361587 DYNC1H1Q14204 4646 aaKnown RBP4.22□□□□□ -1.73
HIPK1-202ENST00000361587 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
HIPK1-202ENST00000361587 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
HIPK1-202ENST00000361587 SACSQ9NZJ4 4579 aa4.16□□□□□ -1.74
HIPK1-202ENST00000361587 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
HIPK1-202ENST00000361587 FAT2Q9NYQ8 4349 aa4.15□□□□□ -1.75
HIPK1-202ENST00000361587 KMT2AQ03164 3969 aa4.14□□□□□ -1.75
HIPK1-202ENST00000361587 MT1HP80294 61 aa4.13□□□□□ -1.75
HIPK1-202ENST00000361587 DNAH7Q8WXX0 4024 aa4.13□□□□□ -1.75
HIPK1-202ENST00000361587 FRAS1Q86XX4 4008 aa4.09□□□□□ -1.75
HIPK1-202ENST00000361587 MT2AP02795 61 aa4.09□□□□□ -1.75
HIPK1-202ENST00000361587 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
HIPK1-202ENST00000361587 FAT1Q14517 4588 aa4.07□□□□□ -1.76
HIPK1-202ENST00000361587 HECTD4Q9Y4D8 3996 aa4.07□□□□□ -1.76
HIPK1-202ENST00000361587 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
HIPK1-202ENST00000361587 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
HIPK1-202ENST00000361587 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
HIPK1-202ENST00000361587 VPS13BQ7Z7G8 4022 aa4.03□□□□□ -1.76
HIPK1-202ENST00000361587 LYSTQ99698 3801 aa4□□□□□ -1.77
HIPK1-202ENST00000361587 APOBP04114 4563 aaKnown RBP3.98□□□□□ -1.77
HIPK1-202ENST00000361587 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
HIPK1-202ENST00000361587 MT1FP04733 61 aa3.97□□□□□ -1.77
HIPK1-202ENST00000361587 RYR2Q92736 4967 aa3.95□□□□□ -1.78
HIPK1-202ENST00000361587 RYR1P21817 5038 aa3.92□□□□□ -1.78
HIPK1-202ENST00000361587 HYDINQ4G0P3 5121 aa3.9□□□□□ -1.78
HIPK1-202ENST00000361587 KRTAP17-1Q9BYP8 105 aa3.87□□□□□ -1.79
HIPK1-202ENST00000361587 PKD1P98161 4303 aa3.86□□□□□ -1.79
HIPK1-202ENST00000361587 FAT3Q8TDW7 4589 aa3.86□□□□□ -1.79
HIPK1-202ENST00000361587 RYR3Q15413 4870 aa3.86□□□□□ -1.79
HIPK1-202ENST00000361587 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.79
HIPK1-202ENST00000361587 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
HIPK1-202ENST00000361587 HSPG2P98160 4391 aa3.8□□□□□ -1.8
HIPK1-202ENST00000361587 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
HIPK1-202ENST00000361587 PKHD1P08F94 4074 aa3.78□□□□□ -1.8
HIPK1-202ENST00000361587 PKHD1L1Q86WI1 4243 aa3.77□□□□□ -1.81
HIPK1-202ENST00000361587 SPRR2EP22531 72 aa3.75□□□□□ -1.81
HIPK1-202ENST00000361587 SPRR2BP35325 72 aa3.75□□□□□ -1.81
HIPK1-202ENST00000361587 SPRR2AP35326 72 aa3.75□□□□□ -1.81
HIPK1-202ENST00000361587 MYCBP2O75592 4640 aa3.74□□□□□ -1.81
HIPK1-202ENST00000361587 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
HIPK1-202ENST00000361587 KRTAP19-1Q8IUB9 90 aa3.72□□□□□ -1.81
HIPK1-202ENST00000361587 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
HIPK1-202ENST00000361587 MT1XP80297 61 aa3.69□□□□□ -1.82
HIPK1-202ENST00000361587 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
HIPK1-202ENST00000361587 TNXBP22105 4242 aa3.68□□□□□ -1.82
HIPK1-202ENST00000361587 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
HIPK1-202ENST00000361587 MT1GP13640 62 aa3.64□□□□□ -1.83
HIPK1-202ENST00000361587 SPRR2DP22532 72 aa3.64□□□□□ -1.83
HIPK1-202ENST00000361587 KMT2CQ8NEZ4 4911 aaKnown RBP3.64□□□□□ -1.83
HIPK1-202ENST00000361587 LCE2BO14633 110 aa3.64□□□□□ -1.83
HIPK1-202ENST00000361587 HERC2O95714 4834 aa3.64□□□□□ -1.83
HIPK1-202ENST00000361587 MT1BP07438 61 aa3.61□□□□□ -1.83
HIPK1-202ENST00000361587 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
HIPK1-202ENST00000361587 HERC1Q15751 4861 aa3.6□□□□□ -1.83
HIPK1-202ENST00000361587 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
HIPK1-202ENST00000361587 LRP2P98164 4655 aa3.57□□□□□ -1.84
HIPK1-202ENST00000361587 KRTAP9-8Q9BYQ0 159 aa3.53□□□□□ -1.84
HIPK1-202ENST00000361587 LCE2CQ5TA81 110 aa3.53□□□□□ -1.84
HIPK1-202ENST00000361587 KRTAP19-2Q3LHN2 52 aa3.51□□□□□ -1.85
HIPK1-202ENST00000361587 EPPK1P58107 5090 aaKnown RBP3.49□□□□□ -1.85
HIPK1-202ENST00000361587 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
HIPK1-202ENST00000361587 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
HIPK1-202ENST00000361587 LPAP08519 4548 aa3.48□□□□□ -1.85
HIPK1-202ENST00000361587 LCE2DQ5TA82 110 aaPredicted RBP3.47□□□□□ -1.85
HIPK1-202ENST00000361587 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.85
HIPK1-202ENST00000361587 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.85
HIPK1-202ENST00000361587 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
HIPK1-202ENST00000361587 MT1LQ93083 61 aa3.45□□□□□ -1.86
HIPK1-202ENST00000361587 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
HIPK1-202ENST00000361587 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.87
HIPK1-202ENST00000361587 MT1EP04732 61 aa3.36□□□□□ -1.87
HIPK1-202ENST00000361587 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
HIPK1-202ENST00000361587 MT3P25713 68 aa3.34□□□□□ -1.87
HIPK1-202ENST00000361587 MT1MQ8N339 61 aa3.27□□□□□ -1.89
HIPK1-202ENST00000361587 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms