RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
SHTN1-202ENST00000355371 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
SHTN1-202ENST00000355371 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
SHTN1-202ENST00000355371 DNAH1Q9P2D7 4330 aa6.81□□□□□ -1.32
SHTN1-202ENST00000355371 AKAP9Q99996 3911 aa6.79□□□□□ -1.32
SHTN1-202ENST00000355371 DNAH10Q8IVF4 4471 aa6.79□□□□□ -1.32
SHTN1-202ENST00000355371 DNAH2Q9P225 4427 aa6.74□□□□□ -1.33
SHTN1-202ENST00000355371 ZNF469Q96JG9 3925 aaPredicted RBP6.73□□□□□ -1.33
SHTN1-202ENST00000355371 DNAH11Q96DT5 4516 aa6.73□□□□□ -1.33
SHTN1-202ENST00000355371 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
SHTN1-202ENST00000355371 PLECQ15149 4684 aaKnown RBP6.71□□□□□ -1.34
SHTN1-202ENST00000355371 DNAH17Q9UFH2 4485 aa6.69□□□□□ -1.34
SHTN1-202ENST00000355371 VPS13DQ5THJ4 4388 aa6.68□□□□□ -1.34
SHTN1-202ENST00000355371 MT1HP80294 61 aa6.65□□□□□ -1.35
SHTN1-202ENST00000355371 CSMD3Q7Z407 3707 aa6.64□□□□□ -1.35
SHTN1-202ENST00000355371 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
SHTN1-202ENST00000355371 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
SHTN1-202ENST00000355371 MT2AP02795 61 aa6.56□□□□□ -1.36
SHTN1-202ENST00000355371 DYNC1H1Q14204 4646 aaKnown RBP6.54□□□□□ -1.36
SHTN1-202ENST00000355371 DNHD1Q96M86 4753 aa6.51□□□□□ -1.37
SHTN1-202ENST00000355371 LRP1BQ9NZR2 4599 aa6.47□□□□□ -1.37
SHTN1-202ENST00000355371 DNAH3Q8TD57 4116 aa6.46□□□□□ -1.37
SHTN1-202ENST00000355371 SACSQ9NZJ4 4579 aa6.45□□□□□ -1.38
SHTN1-202ENST00000355371 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
SHTN1-202ENST00000355371 STARD9Q9P2P6 4700 aa6.42□□□□□ -1.38
SHTN1-202ENST00000355371 FAT2Q9NYQ8 4349 aa6.42□□□□□ -1.38
SHTN1-202ENST00000355371 MT1FP04733 61 aa6.41□□□□□ -1.38
SHTN1-202ENST00000355371 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
SHTN1-202ENST00000355371 FAT1Q14517 4588 aa6.36□□□□□ -1.39
SHTN1-202ENST00000355371 RYR1P21817 5038 aa6.29□□□□□ -1.4
SHTN1-202ENST00000355371 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
SHTN1-202ENST00000355371 KRTAP19-5Q3LI72 72 aa6.24□□□□□ -1.41
SHTN1-202ENST00000355371 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
SHTN1-202ENST00000355371 ANK2Q01484 3957 aa6.23□□□□□ -1.41
SHTN1-202ENST00000355371 PRKDCP78527 4128 aaKnown RBP6.21□□□□□ -1.42
SHTN1-202ENST00000355371 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
SHTN1-202ENST00000355371 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
SHTN1-202ENST00000355371 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.42
SHTN1-202ENST00000355371 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
SHTN1-202ENST00000355371 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
SHTN1-202ENST00000355371 KMT2AQ03164 3969 aa6.11□□□□□ -1.43
SHTN1-202ENST00000355371 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
SHTN1-202ENST00000355371 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
SHTN1-202ENST00000355371 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
SHTN1-202ENST00000355371 RYR3Q15413 4870 aa6.07□□□□□ -1.44
SHTN1-202ENST00000355371 KRTAP17-1Q9BYP8 105 aa6.06□□□□□ -1.44
SHTN1-202ENST00000355371 DNAH7Q8WXX0 4024 aa6.01□□□□□ -1.45
SHTN1-202ENST00000355371 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
SHTN1-202ENST00000355371 RYR2Q92736 4967 aa5.97□□□□□ -1.45
SHTN1-202ENST00000355371 CMYA5Q8N3K9 4069 aa5.97□□□□□ -1.45
SHTN1-202ENST00000355371 MT1XP80297 61 aa5.93□□□□□ -1.46
SHTN1-202ENST00000355371 KIAA1109Q2LD37 5005 aa5.91□□□□□ -1.46
SHTN1-202ENST00000355371 LYSTQ99698 3801 aa5.91□□□□□ -1.46
SHTN1-202ENST00000355371 LRP1Q07954 4544 aaKnown RBP5.91□□□□□ -1.46
SHTN1-202ENST00000355371 MT1BP07438 61 aa5.88□□□□□ -1.47
SHTN1-202ENST00000355371 HERC1Q15751 4861 aa5.87□□□□□ -1.47
SHTN1-202ENST00000355371 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
SHTN1-202ENST00000355371 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
SHTN1-202ENST00000355371 HSPG2P98160 4391 aa5.84□□□□□ -1.47
SHTN1-202ENST00000355371 FRAS1Q86XX4 4008 aa5.84□□□□□ -1.47
SHTN1-202ENST00000355371 HECTD4Q9Y4D8 3996 aa5.81□□□□□ -1.48
SHTN1-202ENST00000355371 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
SHTN1-202ENST00000355371 SPRR2EP22531 72 aa5.75□□□□□ -1.49
SHTN1-202ENST00000355371 SPRR2BP35325 72 aa5.75□□□□□ -1.49
SHTN1-202ENST00000355371 SPRR2AP35326 72 aa5.75□□□□□ -1.49
SHTN1-202ENST00000355371 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
SHTN1-202ENST00000355371 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
SHTN1-202ENST00000355371 PKD1P98161 4303 aa5.65□□□□□ -1.51
SHTN1-202ENST00000355371 MT1GP13640 62 aa5.64□□□□□ -1.51
SHTN1-202ENST00000355371 HERC2O95714 4834 aa5.63□□□□□ -1.51
SHTN1-202ENST00000355371 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
SHTN1-202ENST00000355371 HYDINQ4G0P3 5121 aa5.62□□□□□ -1.51
SHTN1-202ENST00000355371 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
SHTN1-202ENST00000355371 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
SHTN1-202ENST00000355371 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
SHTN1-202ENST00000355371 LCE2BO14633 110 aa5.57□□□□□ -1.52
SHTN1-202ENST00000355371 SPRR2DP22532 72 aa5.57□□□□□ -1.52
SHTN1-202ENST00000355371 PKHD1L1Q86WI1 4243 aa5.56□□□□□ -1.52
SHTN1-202ENST00000355371 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
SHTN1-202ENST00000355371 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
SHTN1-202ENST00000355371 LRP2P98164 4655 aa5.49□□□□□ -1.53
SHTN1-202ENST00000355371 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
SHTN1-202ENST00000355371 PKHD1P08F94 4074 aa5.44□□□□□ -1.54
SHTN1-202ENST00000355371 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
SHTN1-202ENST00000355371 MT1LQ93083 61 aa5.38□□□□□ -1.55
SHTN1-202ENST00000355371 LPAP08519 4548 aa5.38□□□□□ -1.55
SHTN1-202ENST00000355371 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
SHTN1-202ENST00000355371 MT1EP04732 61 aa5.35□□□□□ -1.55
SHTN1-202ENST00000355371 TNXBP22105 4242 aa5.34□□□□□ -1.55
SHTN1-202ENST00000355371 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
SHTN1-202ENST00000355371 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
SHTN1-202ENST00000355371 KMT2CQ8NEZ4 4911 aaKnown RBP5.28□□□□□ -1.56
SHTN1-202ENST00000355371 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
SHTN1-202ENST00000355371 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
SHTN1-202ENST00000355371 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
SHTN1-202ENST00000355371 MT1MQ8N339 61 aa5.17□□□□□ -1.58
SHTN1-202ENST00000355371 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
SHTN1-202ENST00000355371 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
SHTN1-202ENST00000355371 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
SHTN1-202ENST00000355371 MT3P25713 68 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms