RNA–Protein interactions for RNA: ENST00000313071.6

FOXG1-201, Transcript of forkhead box G1, humanhuman

APPRIS P1 BASIC

Gene FOXG1, Length 4,890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1-201ENST00000313071 ALMS1Q8TCU4 4167 aa10.24□□□□□ -0.77
FOXG1-201ENST00000313071 DNAH5Q8TE73 4624 aa10.16□□□□□ -0.78
FOXG1-201ENST00000313071 PLECQ15149 4684 aaKnown RBP10.07□□□□□ -0.8
FOXG1-201ENST00000313071 KRTAP8-1Q8IUC2 63 aa10.04□□□□□ -0.8
FOXG1-201ENST00000313071 DNAH9Q9NYC9 4486 aa10□□□□□ -0.81
FOXG1-201ENST00000313071 KRTAP4-1Q9BYQ7 146 aa10□□□□□ -0.81
FOXG1-201ENST00000313071 DNAH10Q8IVF4 4471 aa9.99□□□□□ -0.81
FOXG1-201ENST00000313071 SPRR2GQ9BYE4 73 aa9.94□□□□□ -0.82
FOXG1-201ENST00000313071 MT1HP80294 61 aa9.89□□□□□ -0.83
FOXG1-201ENST00000313071 DNAH11Q96DT5 4516 aa9.86□□□□□ -0.83
FOXG1-201ENST00000313071 KRTAP10-5P60370 271 aa9.84□□□□□ -0.83
FOXG1-201ENST00000313071 MT2AP02795 61 aa9.84□□□□□ -0.83
FOXG1-201ENST00000313071 FAT1Q14517 4588 aa9.81□□□□□ -0.84
FOXG1-201ENST00000313071 DNAH1Q9P2D7 4330 aa9.81□□□□□ -0.84
FOXG1-201ENST00000313071 DNAH2Q9P225 4427 aa9.8□□□□□ -0.84
FOXG1-201ENST00000313071 ZNF469Q96JG9 3925 aaPredicted RBP9.77□□□□□ -0.85
FOXG1-201ENST00000313071 CSMD3Q7Z407 3707 aa9.68□□□□□ -0.86
FOXG1-201ENST00000313071 DNAH17Q9UFH2 4485 aa9.65□□□□□ -0.86
FOXG1-201ENST00000313071 AKAP9Q99996 3911 aa9.63□□□□□ -0.87
FOXG1-201ENST00000313071 VPS13DQ5THJ4 4388 aa9.6□□□□□ -0.87
FOXG1-201ENST00000313071 DYNC1H1Q14204 4646 aaKnown RBP9.6□□□□□ -0.87
FOXG1-201ENST00000313071 KRTAP19-4Q3LI73 84 aa9.59□□□□□ -0.87
FOXG1-201ENST00000313071 MT1FP04733 61 aa9.58□□□□□ -0.88
FOXG1-201ENST00000313071 DNHD1Q96M86 4753 aa9.58□□□□□ -0.88
FOXG1-201ENST00000313071 DNAH8Q96JB1 4490 aa9.46□□□□□ -0.9
FOXG1-201ENST00000313071 RYR1P21817 5038 aa9.46□□□□□ -0.9
FOXG1-201ENST00000313071 LRP1BQ9NZR2 4599 aa9.44□□□□□ -0.9
FOXG1-201ENST00000313071 SACSQ9NZJ4 4579 aa9.42□□□□□ -0.9
FOXG1-201ENST00000313071 KRTAP19-5Q3LI72 72 aa9.41□□□□□ -0.9
FOXG1-201ENST00000313071 LCE3CQ5T5A8 94 aa9.37□□□□□ -0.91
FOXG1-201ENST00000313071 KRTAP10-7P60409 375 aaPredicted RBP9.3□□□□□ -0.92
FOXG1-201ENST00000313071 DYNC2H1Q8NCM8 4307 aaKnown RBP9.26□□□□□ -0.93
FOXG1-201ENST00000313071 SPRR2FQ96RM1 72 aa9.26□□□□□ -0.93
FOXG1-201ENST00000313071 KRTAP19-8Q3LI54 63 aa9.25□□□□□ -0.93
FOXG1-201ENST00000313071 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
FOXG1-201ENST00000313071 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
FOXG1-201ENST00000313071 STARD9Q9P2P6 4700 aa9.16□□□□□ -0.94
FOXG1-201ENST00000313071 APOBP04114 4563 aaKnown RBP9.15□□□□□ -0.94
FOXG1-201ENST00000313071 DNAH3Q8TD57 4116 aa9.02□□□□□ -0.97
FOXG1-201ENST00000313071 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.98
FOXG1-201ENST00000313071 RYR3Q15413 4870 aa8.92□□□□□ -0.98
FOXG1-201ENST00000313071 KIAA1109Q2LD37 5005 aa8.92□□□□□ -0.98
FOXG1-201ENST00000313071 MT1XP80297 61 aa8.88□□□□□ -0.99
FOXG1-201ENST00000313071 ANK2Q01484 3957 aa8.87□□□□□ -0.99
FOXG1-201ENST00000313071 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
FOXG1-201ENST00000313071 MYCBP2O75592 4640 aa8.81□□□□□ -1
FOXG1-201ENST00000313071 MT1BP07438 61 aa8.81□□□□□ -1
FOXG1-201ENST00000313071 KRTAP17-1Q9BYP8 105 aa8.78□□□□□ -1
FOXG1-201ENST00000313071 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1.01
FOXG1-201ENST00000313071 PRKDCP78527 4128 aaKnown RBP8.77□□□□□ -1.01
FOXG1-201ENST00000313071 RYR2Q92736 4967 aa8.77□□□□□ -1.01
FOXG1-201ENST00000313071 CMYA5Q8N3K9 4069 aa8.74□□□□□ -1.01
FOXG1-201ENST00000313071 KRTAP9-8Q9BYQ0 159 aa8.73□□□□□ -1.01
FOXG1-201ENST00000313071 SPRR5A0A1B0GTR4 108 aa8.69□□□□□ -1.02
FOXG1-201ENST00000313071 SPRR2EP22531 72 aa8.6□□□□□ -1.03
FOXG1-201ENST00000313071 SPRR2BP35325 72 aa8.6□□□□□ -1.03
FOXG1-201ENST00000313071 SPRR2AP35326 72 aa8.6□□□□□ -1.03
FOXG1-201ENST00000313071 KMT2AQ03164 3969 aa8.59□□□□□ -1.03
FOXG1-201ENST00000313071 MT1GP13640 62 aa8.58□□□□□ -1.04
FOXG1-201ENST00000313071 HERC1Q15751 4861 aa8.56□□□□□ -1.04
FOXG1-201ENST00000313071 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
FOXG1-201ENST00000313071 KRTAP9-3Q9BYQ3 159 aa8.54□□□□□ -1.04
FOXG1-201ENST00000313071 LYSTQ99698 3801 aa8.53□□□□□ -1.04
FOXG1-201ENST00000313071 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
FOXG1-201ENST00000313071 DNAH6Q9C0G6 4158 aa8.49□□□□□ -1.05
FOXG1-201ENST00000313071 KRTAP12-4P60329 112 aa8.48□□□□□ -1.05
FOXG1-201ENST00000313071 HSPG2P98160 4391 aa8.46□□□□□ -1.06
FOXG1-201ENST00000313071 KRTAP4-8A0A0G2JLE6 195 aa8.41□□□□□ -1.06
FOXG1-201ENST00000313071 KRTAP4-8Q9BYQ9 185 aa8.41□□□□□ -1.06
FOXG1-201ENST00000313071 DNAH7Q8WXX0 4024 aa8.4□□□□□ -1.06
FOXG1-201ENST00000313071 LCE2BO14633 110 aa8.4□□□□□ -1.07
FOXG1-201ENST00000313071 PKD1P98161 4303 aa8.39□□□□□ -1.07
FOXG1-201ENST00000313071 HERC2O95714 4834 aa8.38□□□□□ -1.07
FOXG1-201ENST00000313071 SPRR2DP22532 72 aa8.34□□□□□ -1.07
FOXG1-201ENST00000313071 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
FOXG1-201ENST00000313071 LRP2P98164 4655 aa8.24□□□□□ -1.09
FOXG1-201ENST00000313071 LCE3DQ9BYE3 92 aa8.23□□□□□ -1.09
FOXG1-201ENST00000313071 BIRC6Q9NR09 4857 aa8.18□□□□□ -1.1
FOXG1-201ENST00000313071 KRTAP19-3Q7Z4W3 81 aa8.18□□□□□ -1.1
FOXG1-201ENST00000313071 MT1LQ93083 61 aa8.16□□□□□ -1.1
FOXG1-201ENST00000313071 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
FOXG1-201ENST00000313071 LCE3EQ5T5B0 92 aa8.14□□□□□ -1.11
FOXG1-201ENST00000313071 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
FOXG1-201ENST00000313071 FRAS1Q86XX4 4008 aa8.06□□□□□ -1.12
FOXG1-201ENST00000313071 MT1EP04732 61 aa8.04□□□□□ -1.12
FOXG1-201ENST00000313071 EPPK1P58107 5090 aaKnown RBP7.95□□□□□ -1.14
FOXG1-201ENST00000313071 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
FOXG1-201ENST00000313071 SYNE1Q8NF91 8797 aaKnown RBP7.91□□□□□ -1.14
FOXG1-201ENST00000313071 MUC17Q685J3 4493 aa7.9□□□□□ -1.14
FOXG1-201ENST00000313071 KRTAP4-7Q9BYR0 210 aa7.89□□□□□ -1.15
FOXG1-201ENST00000313071 KMT2CQ8NEZ4 4911 aaKnown RBP7.82□□□□□ -1.16
FOXG1-201ENST00000313071 MT1MQ8N339 61 aa7.78□□□□□ -1.16
FOXG1-201ENST00000313071 KRTAP19-6Q3LI70 58 aa7.77□□□□□ -1.17
FOXG1-201ENST00000313071 HYDINQ4G0P3 5121 aa7.75□□□□□ -1.17
FOXG1-201ENST00000313071 FLGP20930 4061 aaPredicted RBP7.71□□□□□ -1.18
FOXG1-201ENST00000313071 MT3P25713 68 aa7.7□□□□□ -1.18
FOXG1-201ENST00000313071 ABCA13Q86UQ4 5058 aa7.68□□□□□ -1.18
FOXG1-201ENST00000313071 LCE2DQ5TA82 110 aaPredicted RBP7.65□□□□□ -1.18
FOXG1-201ENST00000313071 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
FOXG1-201ENST00000313071 LPAP08519 4548 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms