RNA–Protein interactions for RNA: ENST00000230859.7

PAPD7-201, Transcript of Non-canonical poly(A) RNA polymerase PAPD7, humanhuman

TSL 1 (best) BASIC

Gene PAPD7, Length 5,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD7-201ENST00000230859 ZNF469Q96JG9 3925 aaPredicted RBP10.66□□□□□ -0.7
PAPD7-201ENST00000230859 KRTAP8-1Q8IUC2 63 aa10.57□□□□□ -0.72
PAPD7-201ENST00000230859 LORP23490 312 aaPredicted RBP10.48□□□□□ -0.73
PAPD7-201ENST00000230859 DNAH9Q9NYC9 4486 aa10.48□□□□□ -0.73
PAPD7-201ENST00000230859 CSMD3Q7Z407 3707 aa10.4□□□□□ -0.74
PAPD7-201ENST00000230859 KRTAP10-5P60370 271 aa10.39□□□□□ -0.75
PAPD7-201ENST00000230859 DNAH1Q9P2D7 4330 aa10.37□□□□□ -0.75
PAPD7-201ENST00000230859 ALMS1Q8TCU4 4167 aa10.34□□□□□ -0.75
PAPD7-201ENST00000230859 PLECQ15149 4684 aaKnown RBP10.29□□□□□ -0.76
PAPD7-201ENST00000230859 DNAH10Q8IVF4 4471 aa10.28□□□□□ -0.76
PAPD7-201ENST00000230859 DNAH17Q9UFH2 4485 aa10.24□□□□□ -0.77
PAPD7-201ENST00000230859 VPS13DQ5THJ4 4388 aa10.18□□□□□ -0.78
PAPD7-201ENST00000230859 DNAH11Q96DT5 4516 aa10.1□□□□□ -0.79
PAPD7-201ENST00000230859 DNAH5Q8TE73 4624 aa10.09□□□□□ -0.79
PAPD7-201ENST00000230859 MT1HP80294 61 aa10.06□□□□□ -0.8
PAPD7-201ENST00000230859 DNAH3Q8TD57 4116 aa10.04□□□□□ -0.8
PAPD7-201ENST00000230859 DNAH8Q96JB1 4490 aa10.01□□□□□ -0.81
PAPD7-201ENST00000230859 KRTAP4-1Q9BYQ7 146 aa9.96□□□□□ -0.81
PAPD7-201ENST00000230859 MT2AP02795 61 aa9.96□□□□□ -0.81
PAPD7-201ENST00000230859 SPRR2GQ9BYE4 73 aa9.94□□□□□ -0.82
PAPD7-201ENST00000230859 DNAH2Q9P225 4427 aa9.94□□□□□ -0.82
PAPD7-201ENST00000230859 STARD9Q9P2P6 4700 aa9.85□□□□□ -0.83
PAPD7-201ENST00000230859 KRTAP10-7P60409 375 aaPredicted RBP9.84□□□□□ -0.83
PAPD7-201ENST00000230859 SPRR2FQ96RM1 72 aa9.77□□□□□ -0.85
PAPD7-201ENST00000230859 DYNC2H1Q8NCM8 4307 aaKnown RBP9.72□□□□□ -0.85
PAPD7-201ENST00000230859 KRTAP19-4Q3LI73 84 aa9.71□□□□□ -0.85
PAPD7-201ENST00000230859 LRP1BQ9NZR2 4599 aa9.71□□□□□ -0.86
PAPD7-201ENST00000230859 SACSQ9NZJ4 4579 aa9.7□□□□□ -0.86
PAPD7-201ENST00000230859 DYNC1H1Q14204 4646 aaKnown RBP9.69□□□□□ -0.86
PAPD7-201ENST00000230859 MT1FP04733 61 aa9.68□□□□□ -0.86
PAPD7-201ENST00000230859 ANK2Q01484 3957 aa9.66□□□□□ -0.86
PAPD7-201ENST00000230859 KRTAP19-5Q3LI72 72 aa9.62□□□□□ -0.87
PAPD7-201ENST00000230859 FAT1Q14517 4588 aa9.61□□□□□ -0.87
PAPD7-201ENST00000230859 LCE3CQ5T5A8 94 aa9.54□□□□□ -0.88
PAPD7-201ENST00000230859 FAT2Q9NYQ8 4349 aa9.48□□□□□ -0.89
PAPD7-201ENST00000230859 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
PAPD7-201ENST00000230859 CMYA5Q8N3K9 4069 aa9.44□□□□□ -0.9
PAPD7-201ENST00000230859 VPS13BQ7Z7G8 4022 aa9.43□□□□□ -0.9
PAPD7-201ENST00000230859 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.9
PAPD7-201ENST00000230859 PRKDCP78527 4128 aaKnown RBP9.4□□□□□ -0.91
PAPD7-201ENST00000230859 DNHD1Q96M86 4753 aa9.38□□□□□ -0.91
PAPD7-201ENST00000230859 HECTD4Q9Y4D8 3996 aa9.35□□□□□ -0.91
PAPD7-201ENST00000230859 DNAH6Q9C0G6 4158 aa9.32□□□□□ -0.92
PAPD7-201ENST00000230859 APOBP04114 4563 aaKnown RBP9.28□□□□□ -0.92
PAPD7-201ENST00000230859 DNAH7Q8WXX0 4024 aa9.21□□□□□ -0.94
PAPD7-201ENST00000230859 KRTAP19-8Q3LI54 63 aa9.2□□□□□ -0.94
PAPD7-201ENST00000230859 RYR1P21817 5038 aa9.2□□□□□ -0.94
PAPD7-201ENST00000230859 LYSTQ99698 3801 aa9.19□□□□□ -0.94
PAPD7-201ENST00000230859 SPRR2EP22531 72 aa9.16□□□□□ -0.94
PAPD7-201ENST00000230859 SPRR2BP35325 72 aa9.16□□□□□ -0.94
PAPD7-201ENST00000230859 SPRR2AP35326 72 aa9.16□□□□□ -0.94
PAPD7-201ENST00000230859 KRTAP19-1Q8IUB9 90 aa9.04□□□□□ -0.96
PAPD7-201ENST00000230859 FAT3Q8TDW7 4589 aa9.01□□□□□ -0.97
PAPD7-201ENST00000230859 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
PAPD7-201ENST00000230859 LRP1Q07954 4544 aaKnown RBP8.92□□□□□ -0.98
PAPD7-201ENST00000230859 SPRR2DP22532 72 aa8.89□□□□□ -0.99
PAPD7-201ENST00000230859 LCE3BQ5TA77 95 aa8.89□□□□□ -0.99
PAPD7-201ENST00000230859 KRTAP12-4P60329 112 aa8.88□□□□□ -0.99
PAPD7-201ENST00000230859 SPRR5A0A1B0GTR4 108 aa8.88□□□□□ -0.99
PAPD7-201ENST00000230859 LCE2BO14633 110 aa8.86□□□□□ -0.99
PAPD7-201ENST00000230859 MT1XP80297 61 aa8.86□□□□□ -0.99
PAPD7-201ENST00000230859 KRTAP17-1Q9BYP8 105 aa8.85□□□□□ -0.99
PAPD7-201ENST00000230859 MT1GP13640 62 aa8.78□□□□□ -1
PAPD7-201ENST00000230859 MT1BP07438 61 aa8.76□□□□□ -1.01
PAPD7-201ENST00000230859 RYR2Q92736 4967 aa8.75□□□□□ -1.01
PAPD7-201ENST00000230859 RYR3Q15413 4870 aa8.75□□□□□ -1.01
PAPD7-201ENST00000230859 KIAA1109Q2LD37 5005 aa8.69□□□□□ -1.02
PAPD7-201ENST00000230859 HYDINQ4G0P3 5121 aa8.69□□□□□ -1.02
PAPD7-201ENST00000230859 KRTAP9-8Q9BYQ0 159 aa8.66□□□□□ -1.02
PAPD7-201ENST00000230859 HERC1Q15751 4861 aa8.58□□□□□ -1.04
PAPD7-201ENST00000230859 PKD1P98161 4303 aa8.56□□□□□ -1.04
PAPD7-201ENST00000230859 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
PAPD7-201ENST00000230859 LCE3DQ9BYE3 92 aa8.52□□□□□ -1.05
PAPD7-201ENST00000230859 KRTAP9-3Q9BYQ3 159 aa8.51□□□□□ -1.05
PAPD7-201ENST00000230859 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
PAPD7-201ENST00000230859 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
PAPD7-201ENST00000230859 PKHD1P08F94 4074 aa8.5□□□□□ -1.05
PAPD7-201ENST00000230859 LRP2P98164 4655 aa8.47□□□□□ -1.05
PAPD7-201ENST00000230859 HSPG2P98160 4391 aa8.43□□□□□ -1.06
PAPD7-201ENST00000230859 LCE3EQ5T5B0 92 aa8.4□□□□□ -1.06
PAPD7-201ENST00000230859 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
PAPD7-201ENST00000230859 KRTAP19-3Q7Z4W3 81 aa8.34□□□□□ -1.07
PAPD7-201ENST00000230859 TNXBP22105 4242 aa8.3□□□□□ -1.08
PAPD7-201ENST00000230859 MT1LQ93083 61 aa8.22□□□□□ -1.09
PAPD7-201ENST00000230859 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.1
PAPD7-201ENST00000230859 KRTAP19-2Q3LHN2 52 aa8.2□□□□□ -1.1
PAPD7-201ENST00000230859 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
PAPD7-201ENST00000230859 LPAP08519 4548 aa8.15□□□□□ -1.1
PAPD7-201ENST00000230859 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
PAPD7-201ENST00000230859 MT1EP04732 61 aa8.08□□□□□ -1.12
PAPD7-201ENST00000230859 HERC2O95714 4834 aa8.07□□□□□ -1.12
PAPD7-201ENST00000230859 MT3P25713 68 aa8□□□□□ -1.13
PAPD7-201ENST00000230859 BIRC6Q9NR09 4857 aa7.99□□□□□ -1.13
PAPD7-201ENST00000230859 MUC17Q685J3 4493 aa7.98□□□□□ -1.13
PAPD7-201ENST00000230859 EPPK1P58107 5090 aaKnown RBP7.96□□□□□ -1.14
PAPD7-201ENST00000230859 KRTAP4-7Q9BYR0 210 aa7.95□□□□□ -1.14
PAPD7-201ENST00000230859 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
PAPD7-201ENST00000230859 MT1MQ8N339 61 aa7.88□□□□□ -1.15
PAPD7-201ENST00000230859 SYNE1Q8NF91 8797 aaKnown RBP7.84□□□□□ -1.16
PAPD7-201ENST00000230859 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms