RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
DDX17-201ENST00000216019 DNAH1Q9P2D7 4330 aa5.52□□□□□ -1.53
DDX17-201ENST00000216019 INE1O15225 51 aa5.49□□□□□ -1.53
DDX17-201ENST00000216019 COL7A1Q02388 2944 aa5.47□□□□□ -1.53
DDX17-201ENST00000216019 DNAH5Q8TE73 4624 aa5.46□□□□□ -1.54
DDX17-201ENST00000216019 CSMD3Q7Z407 3707 aa5.45□□□□□ -1.54
DDX17-201ENST00000216019 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
DDX17-201ENST00000216019 PLECQ15149 4684 aaKnown RBP5.41□□□□□ -1.54
DDX17-201ENST00000216019 ZNF469Q96JG9 3925 aaPredicted RBP5.4□□□□□ -1.54
DDX17-201ENST00000216019 DNAH10Q8IVF4 4471 aa5.39□□□□□ -1.55
DDX17-201ENST00000216019 DNAH2Q9P225 4427 aa5.38□□□□□ -1.55
DDX17-201ENST00000216019 DNAH17Q9UFH2 4485 aa5.36□□□□□ -1.55
DDX17-201ENST00000216019 KRTAP4-1Q9BYQ7 146 aa5.36□□□□□ -1.55
DDX17-201ENST00000216019 DNAH3Q8TD57 4116 aa5.33□□□□□ -1.56
DDX17-201ENST00000216019 VPS13DQ5THJ4 4388 aa5.33□□□□□ -1.56
DDX17-201ENST00000216019 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
DDX17-201ENST00000216019 DNAH11Q96DT5 4516 aa5.29□□□□□ -1.56
DDX17-201ENST00000216019 MT1HP80294 61 aa5.27□□□□□ -1.57
DDX17-201ENST00000216019 DYNC1H1Q14204 4646 aaKnown RBP5.2□□□□□ -1.58
DDX17-201ENST00000216019 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
DDX17-201ENST00000216019 FAT2Q9NYQ8 4349 aa5.19□□□□□ -1.58
DDX17-201ENST00000216019 LRP1BQ9NZR2 4599 aa5.18□□□□□ -1.58
DDX17-201ENST00000216019 STARD9Q9P2P6 4700 aa5.18□□□□□ -1.58
DDX17-201ENST00000216019 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
DDX17-201ENST00000216019 DYNC2H1Q8NCM8 4307 aaKnown RBP5.16□□□□□ -1.58
DDX17-201ENST00000216019 MT2AP02795 61 aa5.16□□□□□ -1.58
DDX17-201ENST00000216019 ANK2Q01484 3957 aa5.12□□□□□ -1.59
DDX17-201ENST00000216019 DNAH8Q96JB1 4490 aa5.12□□□□□ -1.59
DDX17-201ENST00000216019 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
DDX17-201ENST00000216019 MT1FP04733 61 aa5.08□□□□□ -1.6
DDX17-201ENST00000216019 DNHD1Q96M86 4753 aa5.05□□□□□ -1.6
DDX17-201ENST00000216019 FAT1Q14517 4588 aa5.03□□□□□ -1.6
DDX17-201ENST00000216019 PRKDCP78527 4128 aaKnown RBP5.02□□□□□ -1.61
DDX17-201ENST00000216019 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
DDX17-201ENST00000216019 CMYA5Q8N3K9 4069 aa5□□□□□ -1.61
DDX17-201ENST00000216019 KMT2AQ03164 3969 aa5□□□□□ -1.61
DDX17-201ENST00000216019 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
DDX17-201ENST00000216019 DNAH7Q8WXX0 4024 aa4.97□□□□□ -1.61
DDX17-201ENST00000216019 VPS13BQ7Z7G8 4022 aa4.96□□□□□ -1.62
DDX17-201ENST00000216019 APOBP04114 4563 aaKnown RBP4.95□□□□□ -1.62
DDX17-201ENST00000216019 RYR1P21817 5038 aa4.94□□□□□ -1.62
DDX17-201ENST00000216019 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
DDX17-201ENST00000216019 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
DDX17-201ENST00000216019 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
DDX17-201ENST00000216019 KRTAP17-1Q9BYP8 105 aa4.86□□□□□ -1.63
DDX17-201ENST00000216019 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
DDX17-201ENST00000216019 RYR3Q15413 4870 aa4.82□□□□□ -1.64
DDX17-201ENST00000216019 FAT3Q8TDW7 4589 aa4.78□□□□□ -1.64
DDX17-201ENST00000216019 HECTD4Q9Y4D8 3996 aa4.77□□□□□ -1.65
DDX17-201ENST00000216019 LYSTQ99698 3801 aa4.76□□□□□ -1.65
DDX17-201ENST00000216019 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
DDX17-201ENST00000216019 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
DDX17-201ENST00000216019 MT1XP80297 61 aa4.66□□□□□ -1.66
DDX17-201ENST00000216019 SPRR2EP22531 72 aa4.65□□□□□ -1.67
DDX17-201ENST00000216019 SPRR2BP35325 72 aa4.65□□□□□ -1.67
DDX17-201ENST00000216019 SPRR2AP35326 72 aa4.65□□□□□ -1.67
DDX17-201ENST00000216019 RYR2Q92736 4967 aa4.64□□□□□ -1.67
DDX17-201ENST00000216019 HERC1Q15751 4861 aa4.62□□□□□ -1.67
DDX17-201ENST00000216019 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
DDX17-201ENST00000216019 MT1BP07438 61 aa4.6□□□□□ -1.67
DDX17-201ENST00000216019 LRP1Q07954 4544 aaKnown RBP4.59□□□□□ -1.67
DDX17-201ENST00000216019 MYCBP2O75592 4640 aa4.59□□□□□ -1.67
DDX17-201ENST00000216019 HSPG2P98160 4391 aa4.59□□□□□ -1.68
DDX17-201ENST00000216019 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
DDX17-201ENST00000216019 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
DDX17-201ENST00000216019 MT1GP13640 62 aa4.55□□□□□ -1.68
DDX17-201ENST00000216019 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
DDX17-201ENST00000216019 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
DDX17-201ENST00000216019 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
DDX17-201ENST00000216019 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
DDX17-201ENST00000216019 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
DDX17-201ENST00000216019 SPRR2DP22532 72 aa4.49□□□□□ -1.69
DDX17-201ENST00000216019 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
DDX17-201ENST00000216019 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
DDX17-201ENST00000216019 PKD1P98161 4303 aa4.46□□□□□ -1.7
DDX17-201ENST00000216019 LPAP08519 4548 aa4.45□□□□□ -1.7
DDX17-201ENST00000216019 LCE2BO14633 110 aa4.44□□□□□ -1.7
DDX17-201ENST00000216019 TNXBP22105 4242 aa4.4□□□□□ -1.71
DDX17-201ENST00000216019 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
DDX17-201ENST00000216019 BIRC6Q9NR09 4857 aa4.37□□□□□ -1.71
DDX17-201ENST00000216019 PKHD1P08F94 4074 aa4.35□□□□□ -1.71
DDX17-201ENST00000216019 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
DDX17-201ENST00000216019 HERC2O95714 4834 aa4.33□□□□□ -1.72
DDX17-201ENST00000216019 MUC17Q685J3 4493 aa4.29□□□□□ -1.72
DDX17-201ENST00000216019 LRP2P98164 4655 aa4.29□□□□□ -1.72
DDX17-201ENST00000216019 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
DDX17-201ENST00000216019 KRTAP19-2Q3LHN2 52 aa4.26□□□□□ -1.73
DDX17-201ENST00000216019 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
DDX17-201ENST00000216019 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
DDX17-201ENST00000216019 MT1LQ93083 61 aa4.22□□□□□ -1.73
DDX17-201ENST00000216019 PCLOQ9Y6V0 5065 aa4.21□□□□□ -1.74
DDX17-201ENST00000216019 KMT2CQ8NEZ4 4911 aaKnown RBP4.2□□□□□ -1.74
DDX17-201ENST00000216019 MT1EP04732 61 aa4.19□□□□□ -1.74
DDX17-201ENST00000216019 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.74
DDX17-201ENST00000216019 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
DDX17-201ENST00000216019 LCE2DQ5TA82 110 aaPredicted RBP4.07□□□□□ -1.76
DDX17-201ENST00000216019 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
DDX17-201ENST00000216019 MT1MQ8N339 61 aa4.06□□□□□ -1.76
DDX17-201ENST00000216019 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
DDX17-201ENST00000216019 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms