RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 BIRC6Q9NR09 4857 aa4.59□□□□□ -1.67
SCARB2-209ENST00000638409 KRTAP10-1P60331 282 aa4.59□□□□□ -1.67
SCARB2-209ENST00000638409 SNURFQ9Y675 71 aa4.59□□□□□ -1.67
SCARB2-209ENST00000638409 KLKP1Q107X0 134 aa4.59□□□□□ -1.68
SCARB2-209ENST00000638409 Q6ZQT0 140 aa4.59□□□□□ -1.68
SCARB2-209ENST00000638409 Q6ZSA8 131 aa4.58□□□□□ -1.68
SCARB2-209ENST00000638409 JMJD7-PLA2G4BH0Y9G9 81 aa4.57□□□□□ -1.68
SCARB2-209ENST00000638409 SPAG11BQ08648 103 aa4.57□□□□□ -1.68
SCARB2-209ENST00000638409 S100A7L2Q5SY68 101 aa4.56□□□□□ -1.68
SCARB2-209ENST00000638409 APOBP04114 4563 aaKnown RBP4.56□□□□□ -1.68
SCARB2-209ENST00000638409 ATP5EP2Q5VTU8 51 aa4.55□□□□□ -1.68
SCARB2-209ENST00000638409 LINC00575Q6W349 94 aa4.55□□□□□ -1.68
SCARB2-209ENST00000638409 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
SCARB2-209ENST00000638409 ROMO1P60602 79 aa4.54□□□□□ -1.68
SCARB2-209ENST00000638409 UNQ6190/PRO20217Q6UXQ8 127 aa4.54□□□□□ -1.68
SCARB2-209ENST00000638409 BCE1O60756 84 aa4.54□□□□□ -1.68
SCARB2-209ENST00000638409 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
SCARB2-209ENST00000638409 COX17Q14061 63 aa4.53□□□□□ -1.68
SCARB2-209ENST00000638409 HSPG2P98160 4391 aa4.53□□□□□ -1.68
SCARB2-209ENST00000638409 TRBV10-3A0A0K0K1G6 114 aa4.53□□□□□ -1.68
SCARB2-209ENST00000638409 A0A1B0GU33 70 aa4.53□□□□□ -1.68
SCARB2-209ENST00000638409 HAMPP81172 84 aa4.53□□□□□ -1.68
SCARB2-209ENST00000638409 SPACA4Q8TDM5 124 aa4.53□□□□□ -1.68
SCARB2-209ENST00000638409 C6orf48Q9UBA6 75 aa4.53□□□□□ -1.68
SCARB2-209ENST00000638409 NDUFC1O43677 76 aa4.52□□□□□ -1.69
SCARB2-209ENST00000638409 Q6ZQY7 126 aa4.52□□□□□ -1.69
SCARB2-209ENST00000638409 A6NN06 94 aa4.52□□□□□ -1.69
SCARB2-209ENST00000638409 RYR1P21817 5038 aa4.51□□□□□ -1.69
SCARB2-209ENST00000638409 LOC110117498A0A087WWA1 95 aa4.51□□□□□ -1.69
SCARB2-209ENST00000638409 A0A096LNI7 61 aa4.51□□□□□ -1.69
SCARB2-209ENST00000638409 PLAC8Q9NZF1 115 aa4.5□□□□□ -1.69
SCARB2-209ENST00000638409 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
SCARB2-209ENST00000638409 IGLV6-57P01721 117 aa4.5□□□□□ -1.69
SCARB2-209ENST00000638409 DSCR10P59022 87 aa4.49□□□□□ -1.69
SCARB2-209ENST00000638409 HERC2O95714 4834 aa4.49□□□□□ -1.69
SCARB2-209ENST00000638409 TRBV7-4A0A0J9YYF1 115 aa4.48□□□□□ -1.69
SCARB2-209ENST00000638409 VPS13BQ7Z7G8 4022 aa4.48□□□□□ -1.69
SCARB2-209ENST00000638409 C20orf166-AS1Q96NR2 134 aa4.48□□□□□ -1.69
SCARB2-209ENST00000638409 KRTAP17-1Q9BYP8 105 aa4.48□□□□□ -1.69
SCARB2-209ENST00000638409 IGKV2-24A0A0C4DH68 120 aa4.48□□□□□ -1.69
SCARB2-209ENST00000638409 COX7BP24311 80 aa4.47□□□□□ -1.69
SCARB2-209ENST00000638409 R4GN34 69 aa4.47□□□□□ -1.69
SCARB2-209ENST00000638409 A0A1W2PNN7 141 aa4.46□□□□□ -1.7
SCARB2-209ENST00000638409 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
SCARB2-209ENST00000638409 Q8N9L7 120 aa4.46□□□□□ -1.7
SCARB2-209ENST00000638409 TMEM254Q8TBM7 123 aa4.46□□□□□ -1.7
SCARB2-209ENST00000638409 SMR3BP02814 79 aaPredicted RBP4.45□□□□□ -1.7
SCARB2-209ENST00000638409 ELOF1P60002 83 aaKnown RBP4.44□□□□□ -1.7
SCARB2-209ENST00000638409 Q1T7F1 81 aa4.44□□□□□ -1.7
SCARB2-209ENST00000638409 hDV103S1A0JD37 113 aa4.44□□□□□ -1.7
SCARB2-209ENST00000638409 NREPQ16612 68 aa4.44□□□□□ -1.7
SCARB2-209ENST00000638409 Q5VSD8 79 aa4.44□□□□□ -1.7
SCARB2-209ENST00000638409 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
SCARB2-209ENST00000638409 A8MU10 97 aa4.43□□□□□ -1.7
SCARB2-209ENST00000638409 PDE6GP18545 87 aa4.43□□□□□ -1.7
SCARB2-209ENST00000638409 KRTAP10-4P60372 401 aaPredicted RBP4.43□□□□□ -1.7
SCARB2-209ENST00000638409 FAT1Q14517 4588 aa4.43□□□□□ -1.7
SCARB2-209ENST00000638409 ATP11AUNQ6ZP68 121 aa4.42□□□□□ -1.7
SCARB2-209ENST00000638409 KRTAP4-5Q9BYR2 181 aa4.42□□□□□ -1.7
SCARB2-209ENST00000638409 ERC2-IT1O76042 136 aa4.42□□□□□ -1.7
SCARB2-209ENST00000638409 RPL37AP61513 92 aaKnown RBP4.41□□□□□ -1.7
SCARB2-209ENST00000638409 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
SCARB2-209ENST00000638409 IGKV4-1P06312 121 aa4.41□□□□□ -1.7
SCARB2-209ENST00000638409 DEFB105AQ8NG35 78 aa4.41□□□□□ -1.7
SCARB2-209ENST00000638409 TRAV22A0A0B4J277 110 aa4.4□□□□□ -1.7
SCARB2-209ENST00000638409 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.7
SCARB2-209ENST00000638409 P0C880 135 aa4.39□□□□□ -1.71
SCARB2-209ENST00000638409 SRRM2Q9UQ35 2752 aaKnown RBP4.39□□□□□ -1.71
SCARB2-209ENST00000638409 HIGD2AQ9BW72 106 aa4.39□□□□□ -1.71
SCARB2-209ENST00000638409 KRTAP11-1Q8IUC1 163 aa4.38□□□□□ -1.71
SCARB2-209ENST00000638409 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
SCARB2-209ENST00000638409 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
SCARB2-209ENST00000638409 C1orf137Q5JT78 98 aa4.35□□□□□ -1.71
SCARB2-209ENST00000638409 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
SCARB2-209ENST00000638409 SPINK6Q6UWN8 80 aa4.35□□□□□ -1.71
SCARB2-209ENST00000638409 A0A1W2PNM2 257 aa4.34□□□□□ -1.71
SCARB2-209ENST00000638409 Q5VV11 94 aa4.34□□□□□ -1.71
SCARB2-209ENST00000638409 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
SCARB2-209ENST00000638409 Q9BRP9 147 aa4.33□□□□□ -1.72
SCARB2-209ENST00000638409 KCNQ1DNQ9H478 68 aa4.33□□□□□ -1.72
SCARB2-209ENST00000638409 HRES1P13985 223 aa4.32□□□□□ -1.72
SCARB2-209ENST00000638409 KRTAP13-1Q8IUC0 172 aa4.32□□□□□ -1.72
SCARB2-209ENST00000638409 SPRR1AP35321 89 aa4.32□□□□□ -1.72
SCARB2-209ENST00000638409 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
SCARB2-209ENST00000638409 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
SCARB2-209ENST00000638409 IGLV5-48A0A075B6I7 105 aa4.31□□□□□ -1.72
SCARB2-209ENST00000638409 A0A0G2JQZ4 141 aa4.31□□□□□ -1.72
SCARB2-209ENST00000638409 Q6ZRX8 168 aa4.31□□□□□ -1.72
SCARB2-209ENST00000638409 HCG22E2RYF7 251 aa4.31□□□□□ -1.72
SCARB2-209ENST00000638409 CHKB-CPT1BH3BT56 60 aa4.31□□□□□ -1.72
SCARB2-209ENST00000638409 CASC2Q6XLA1 102 aa4.31□□□□□ -1.72
SCARB2-209ENST00000638409 ETDCA0A1B0GVM5 59 aa4.3□□□□□ -1.72
SCARB2-209ENST00000638409 K7EQZ3 153 aa4.3□□□□□ -1.72
SCARB2-209ENST00000638409 FAT3Q8TDW7 4589 aa4.29□□□□□ -1.72
SCARB2-209ENST00000638409 CYP4F30PQ9H0H9 118 aa4.29□□□□□ -1.72
SCARB2-209ENST00000638409 MYCBP2O75592 4640 aa4.29□□□□□ -1.72
SCARB2-209ENST00000638409 ASB16-AS1Q495Z4 193 aa4.29□□□□□ -1.72
SCARB2-209ENST00000638409 MOBPQ13875 183 aa4.28□□□□□ -1.72
SCARB2-209ENST00000638409 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
SCARB2-209ENST00000638409 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms