RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 C8orf87E5RJ46 101 aa5.09□□□□□ -1.6
PTPDC1-204ENST00000620992 Q6ZSA8 131 aa5.08□□□□□ -1.6
PTPDC1-204ENST00000620992 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
PTPDC1-204ENST00000620992 COA5Q86WW8 74 aa5.07□□□□□ -1.6
PTPDC1-204ENST00000620992 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
PTPDC1-204ENST00000620992 KRTAP11-1Q8IUC1 163 aa5.06□□□□□ -1.6
PTPDC1-204ENST00000620992 PANO1I0J062 215 aa5.06□□□□□ -1.6
PTPDC1-204ENST00000620992 RBM12B-AS1Q9P1G2 102 aa5.04□□□□□ -1.6
PTPDC1-204ENST00000620992 Q5VSD8 79 aa5.03□□□□□ -1.6
PTPDC1-204ENST00000620992 CMYA5Q8N3K9 4069 aa5.02□□□□□ -1.61
PTPDC1-204ENST00000620992 DNAH10Q8IVF4 4471 aa5.02□□□□□ -1.61
PTPDC1-204ENST00000620992 LYSTQ99698 3801 aa5.02□□□□□ -1.61
PTPDC1-204ENST00000620992 LCE6AA0A183 80 aa5.01□□□□□ -1.61
PTPDC1-204ENST00000620992 HUWE1Q7Z6Z7 4374 aaKnown RBP5.01□□□□□ -1.61
PTPDC1-204ENST00000620992 ZCCHC13Q8WW36 166 aaKnown RBP5.01□□□□□ -1.61
PTPDC1-204ENST00000620992 COL7A1Q02388 2944 aa5□□□□□ -1.61
PTPDC1-204ENST00000620992 H3BPC8 53 aa4.99□□□□□ -1.61
PTPDC1-204ENST00000620992 Q8N9P0 234 aaPredicted RBP4.98□□□□□ -1.61
PTPDC1-204ENST00000620992 PLAC8Q9NZF1 115 aa4.98□□□□□ -1.61
PTPDC1-204ENST00000620992 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
PTPDC1-204ENST00000620992 KRTAP29-1A8MX34 341 aaPredicted RBP4.96□□□□□ -1.61
PTPDC1-204ENST00000620992 UQCR11O14957 56 aa4.96□□□□□ -1.62
PTPDC1-204ENST00000620992 SPRR1BP22528 89 aa4.96□□□□□ -1.62
PTPDC1-204ENST00000620992 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
PTPDC1-204ENST00000620992 CYP4F30PQ9H0H9 118 aa4.94□□□□□ -1.62
PTPDC1-204ENST00000620992 DNAH1Q9P2D7 4330 aa4.94□□□□□ -1.62
PTPDC1-204ENST00000620992 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
PTPDC1-204ENST00000620992 DNAH9Q9NYC9 4486 aa4.93□□□□□ -1.62
PTPDC1-204ENST00000620992 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
PTPDC1-204ENST00000620992 Q1T7F1 81 aa4.92□□□□□ -1.62
PTPDC1-204ENST00000620992 CAMK2N1Q7Z7J9 78 aa4.92□□□□□ -1.62
PTPDC1-204ENST00000620992 A0A087X002 238 aa4.92□□□□□ -1.62
PTPDC1-204ENST00000620992 A8MU10 97 aa4.92□□□□□ -1.62
PTPDC1-204ENST00000620992 CD164Q04900 197 aa4.92□□□□□ -1.62
PTPDC1-204ENST00000620992 HRES1P13985 223 aa4.91□□□□□ -1.62
PTPDC1-204ENST00000620992 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
PTPDC1-204ENST00000620992 SPINK7P58062 85 aa4.91□□□□□ -1.62
PTPDC1-204ENST00000620992 Q6ZRN7 208 aaPredicted RBP4.9□□□□□ -1.63
PTPDC1-204ENST00000620992 KRTAP13-1Q8IUC0 172 aa4.89□□□□□ -1.63
PTPDC1-204ENST00000620992 Q6ZR54 194 aa4.89□□□□□ -1.63
PTPDC1-204ENST00000620992 SPANXA2-OT1Q8N9U9 137 aa4.89□□□□□ -1.63
PTPDC1-204ENST00000620992 CRIPTQ9P021 101 aa4.88□□□□□ -1.63
PTPDC1-204ENST00000620992 DNAH7Q8WXX0 4024 aa4.88□□□□□ -1.63
PTPDC1-204ENST00000620992 PLECQ15149 4684 aaKnown RBP4.85□□□□□ -1.63
PTPDC1-204ENST00000620992 FBN3Q75N90 2809 aa4.85□□□□□ -1.63
PTPDC1-204ENST00000620992 NOTCH2NLQ7Z3S9 236 aa4.84□□□□□ -1.63
PTPDC1-204ENST00000620992 Q5VV11 94 aa4.83□□□□□ -1.64
PTPDC1-204ENST00000620992 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
PTPDC1-204ENST00000620992 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
PTPDC1-204ENST00000620992 CSAG1Q6PB30 78 aa4.82□□□□□ -1.64
PTPDC1-204ENST00000620992 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
PTPDC1-204ENST00000620992 Q5W150 140 aa4.81□□□□□ -1.64
PTPDC1-204ENST00000620992 A0A1B0GU33 70 aa4.8□□□□□ -1.64
PTPDC1-204ENST00000620992 R4GN34 69 aa4.8□□□□□ -1.64
PTPDC1-204ENST00000620992 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
PTPDC1-204ENST00000620992 MEGF8Q7Z7M0 2845 aa4.79□□□□□ -1.64
PTPDC1-204ENST00000620992 ASB16-AS1Q495Z4 193 aa4.78□□□□□ -1.64
PTPDC1-204ENST00000620992 FRAS1Q86XX4 4008 aa4.77□□□□□ -1.65
PTPDC1-204ENST00000620992 STARD9Q9P2P6 4700 aa4.76□□□□□ -1.65
PTPDC1-204ENST00000620992 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
PTPDC1-204ENST00000620992 S4R3F8 94 aa4.75□□□□□ -1.65
PTPDC1-204ENST00000620992 LCA10Q71F78 164 aa4.75□□□□□ -1.65
PTPDC1-204ENST00000620992 KMT2AQ03164 3969 aa4.75□□□□□ -1.65
PTPDC1-204ENST00000620992 Q75L30 129 aa4.74□□□□□ -1.65
PTPDC1-204ENST00000620992 H3BS24 57 aa4.73□□□□□ -1.65
PTPDC1-204ENST00000620992 PRKDCP78527 4128 aaKnown RBP4.72□□□□□ -1.65
PTPDC1-204ENST00000620992 LINC01558Q9Y6Z2 57 aa4.71□□□□□ -1.66
PTPDC1-204ENST00000620992 M0QZ58 72 aa4.71□□□□□ -1.66
PTPDC1-204ENST00000620992 DNAH8Q96JB1 4490 aa4.7□□□□□ -1.66
PTPDC1-204ENST00000620992 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
PTPDC1-204ENST00000620992 HECTD4Q9Y4D8 3996 aa4.7□□□□□ -1.66
PTPDC1-204ENST00000620992 VPS13DQ5THJ4 4388 aa4.69□□□□□ -1.66
PTPDC1-204ENST00000620992 KRTAP13-2Q52LG2 175 aa4.69□□□□□ -1.66
PTPDC1-204ENST00000620992 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
PTPDC1-204ENST00000620992 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
PTPDC1-204ENST00000620992 DNAH2Q9P225 4427 aa4.66□□□□□ -1.66
PTPDC1-204ENST00000620992 DNAH17Q9UFH2 4485 aa4.66□□□□□ -1.66
PTPDC1-204ENST00000620992 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
PTPDC1-204ENST00000620992 DNAH6Q9C0G6 4158 aa4.63□□□□□ -1.67
PTPDC1-204ENST00000620992 DMAC1Q96GE9 116 aa4.62□□□□□ -1.67
PTPDC1-204ENST00000620992 DNAH11Q96DT5 4516 aa4.61□□□□□ -1.67
PTPDC1-204ENST00000620992 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
PTPDC1-204ENST00000620992 C20orf166-AS1Q96NR2 134 aa4.59□□□□□ -1.67
PTPDC1-204ENST00000620992 A6NN06 94 aa4.59□□□□□ -1.67
PTPDC1-204ENST00000620992 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
PTPDC1-204ENST00000620992 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
PTPDC1-204ENST00000620992 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
PTPDC1-204ENST00000620992 DNHD1Q96M86 4753 aa4.56□□□□□ -1.68
PTPDC1-204ENST00000620992 A0A1B0GVY2 172 aa4.56□□□□□ -1.68
PTPDC1-204ENST00000620992 KRTAP16-1A8MUX0 517 aa4.56□□□□□ -1.68
PTPDC1-204ENST00000620992 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
PTPDC1-204ENST00000620992 DNAH5Q8TE73 4624 aa4.55□□□□□ -1.68
PTPDC1-204ENST00000620992 RPL37P61927 97 aaKnown RBP4.54□□□□□ -1.68
PTPDC1-204ENST00000620992 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
PTPDC1-204ENST00000620992 A8MUU9 505 aa4.5□□□□□ -1.69
PTPDC1-204ENST00000620992 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
PTPDC1-204ENST00000620992 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
PTPDC1-204ENST00000620992 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
PTPDC1-204ENST00000620992 PKD1P98161 4303 aa4.42□□□□□ -1.7
PTPDC1-204ENST00000620992 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms