RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.92□□□□□ -1.14
MSH6-214ENST00000616033 Q96NJ1 140 aa7.91□□□□□ -1.14
MSH6-214ENST00000616033 TGP01266 2768 aa7.91□□□□□ -1.14
MSH6-214ENST00000616033 HUWE1Q7Z6Z7 4374 aaKnown RBP7.91□□□□□ -1.14
MSH6-214ENST00000616033 Q5W150 140 aa7.9□□□□□ -1.14
MSH6-214ENST00000616033 CRIPTQ9P021 101 aa7.9□□□□□ -1.15
MSH6-214ENST00000616033 SPRR1BP22528 89 aa7.89□□□□□ -1.15
MSH6-214ENST00000616033 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
MSH6-214ENST00000616033 C14orf177Q52M58 125 aa7.86□□□□□ -1.15
MSH6-214ENST00000616033 A0A1B0GU69 56 aa7.85□□□□□ -1.15
MSH6-214ENST00000616033 C1orf134Q5TEV5 83 aa7.85□□□□□ -1.15
MSH6-214ENST00000616033 Q6ZR54 194 aa7.85□□□□□ -1.15
MSH6-214ENST00000616033 FBN3Q75N90 2809 aa7.84□□□□□ -1.15
MSH6-214ENST00000616033 DNAH3Q8TD57 4116 aa7.83□□□□□ -1.16
MSH6-214ENST00000616033 SPINK1P00995 79 aa7.83□□□□□ -1.16
MSH6-214ENST00000616033 PSORS1C2Q9UIG4 136 aa7.82□□□□□ -1.16
MSH6-214ENST00000616033 DNHD1Q96M86 4753 aa7.81□□□□□ -1.16
MSH6-214ENST00000616033 DNAH7Q8WXX0 4024 aa7.81□□□□□ -1.16
MSH6-214ENST00000616033 ACYP2P14621 99 aa7.79□□□□□ -1.16
MSH6-214ENST00000616033 WWC2-AS2Q96NR7 200 aa7.79□□□□□ -1.16
MSH6-214ENST00000616033 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
MSH6-214ENST00000616033 MEGF8Q7Z7M0 2845 aa7.78□□□□□ -1.16
MSH6-214ENST00000616033 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
MSH6-214ENST00000616033 FRAS1Q86XX4 4008 aa7.78□□□□□ -1.16
MSH6-214ENST00000616033 IGKV2D-30A0A075B6S6 120 aa7.77□□□□□ -1.17
MSH6-214ENST00000616033 IGKV2-30P06310 120 aa7.77□□□□□ -1.17
MSH6-214ENST00000616033 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
MSH6-214ENST00000616033 PLAC8Q9NZF1 115 aa7.77□□□□□ -1.17
MSH6-214ENST00000616033 NBDYA0A0U1RRE5 68 aa7.76□□□□□ -1.17
MSH6-214ENST00000616033 RTL8CO15255 209 aa7.76□□□□□ -1.17
MSH6-214ENST00000616033 APLNQ9ULZ1 77 aa7.76□□□□□ -1.17
MSH6-214ENST00000616033 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
MSH6-214ENST00000616033 ASB16-AS1Q495Z4 193 aa7.74□□□□□ -1.17
MSH6-214ENST00000616033 PLECQ15149 4684 aaKnown RBP7.73□□□□□ -1.17
MSH6-214ENST00000616033 SPACA4Q8TDM5 124 aa7.72□□□□□ -1.17
MSH6-214ENST00000616033 PRKDCP78527 4128 aaKnown RBP7.7□□□□□ -1.18
MSH6-214ENST00000616033 ZNF861PO60384 105 aa7.69□□□□□ -1.18
MSH6-214ENST00000616033 IGLV5-52A0A0A0MRZ9 124 aa7.68□□□□□ -1.18
MSH6-214ENST00000616033 UQCR11O14957 56 aa7.67□□□□□ -1.18
MSH6-214ENST00000616033 A0A087WTM6 91 aa7.65□□□□□ -1.18
MSH6-214ENST00000616033 STARD9Q9P2P6 4700 aa7.64□□□□□ -1.19
MSH6-214ENST00000616033 LINC00483Q53H64 154 aa7.64□□□□□ -1.19
MSH6-214ENST00000616033 LY6G6CO95867 125 aa7.64□□□□□ -1.19
MSH6-214ENST00000616033 Q6ZRN7 208 aaPredicted RBP7.62□□□□□ -1.19
MSH6-214ENST00000616033 Q8N1X5 172 aa7.61□□□□□ -1.19
MSH6-214ENST00000616033 NUPR2A6NF83 97 aa7.61□□□□□ -1.19
MSH6-214ENST00000616033 DMAC1Q96GE9 116 aa7.6□□□□□ -1.19
MSH6-214ENST00000616033 DNAH8Q96JB1 4490 aa7.58□□□□□ -1.2
MSH6-214ENST00000616033 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
MSH6-214ENST00000616033 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
MSH6-214ENST00000616033 IGLV7-43P04211 117 aa7.57□□□□□ -1.2
MSH6-214ENST00000616033 SSBP3-AS1Q7Z2R9 100 aa7.57□□□□□ -1.2
MSH6-214ENST00000616033 KMT2AQ03164 3969 aa7.57□□□□□ -1.2
MSH6-214ENST00000616033 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
MSH6-214ENST00000616033 ROMO1P60602 79 aa7.53□□□□□ -1.2
MSH6-214ENST00000616033 SPINT4Q6UDR6 99 aa7.47□□□□□ -1.21
MSH6-214ENST00000616033 DNAH17Q9UFH2 4485 aa7.47□□□□□ -1.21
MSH6-214ENST00000616033 HECTD4Q9Y4D8 3996 aa7.44□□□□□ -1.22
MSH6-214ENST00000616033 KRTAP13-2Q52LG2 175 aa7.44□□□□□ -1.22
MSH6-214ENST00000616033 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
MSH6-214ENST00000616033 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
MSH6-214ENST00000616033 A8MUU9 505 aa7.42□□□□□ -1.22
MSH6-214ENST00000616033 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
MSH6-214ENST00000616033 DNAH2Q9P225 4427 aa7.4□□□□□ -1.22
MSH6-214ENST00000616033 VPS13DQ5THJ4 4388 aa7.4□□□□□ -1.22
MSH6-214ENST00000616033 P0C880 135 aa7.4□□□□□ -1.23
MSH6-214ENST00000616033 DNAH6Q9C0G6 4158 aa7.39□□□□□ -1.23
MSH6-214ENST00000616033 C9orf92A6NGG3 77 aa7.38□□□□□ -1.23
MSH6-214ENST00000616033 NDUFAF8A1L188 74 aa7.38□□□□□ -1.23
MSH6-214ENST00000616033 DYNC2H1Q8NCM8 4307 aaKnown RBP7.36□□□□□ -1.23
MSH6-214ENST00000616033 DNAH11Q96DT5 4516 aa7.36□□□□□ -1.23
MSH6-214ENST00000616033 LINC00304Q8N9R0 145 aa7.36□□□□□ -1.23
MSH6-214ENST00000616033 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
MSH6-214ENST00000616033 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
MSH6-214ENST00000616033 HYDINQ4G0P3 5121 aa7.33□□□□□ -1.24
MSH6-214ENST00000616033 Q6ZSA8 131 aa7.31□□□□□ -1.24
MSH6-214ENST00000616033 H0YAA0 97 aa7.3□□□□□ -1.24
MSH6-214ENST00000616033 A0A0A0MQY5 61 aa7.28□□□□□ -1.24
MSH6-214ENST00000616033 KRTAP10-1P60331 282 aa7.27□□□□□ -1.24
MSH6-214ENST00000616033 A0A1B0GU33 70 aa7.27□□□□□ -1.25
MSH6-214ENST00000616033 A0A0D9SG42 100 aa7.26□□□□□ -1.25
MSH6-214ENST00000616033 LRP1BQ9NZR2 4599 aa7.26□□□□□ -1.25
MSH6-214ENST00000616033 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
MSH6-214ENST00000616033 SMR3BP02814 79 aaPredicted RBP7.23□□□□□ -1.25
MSH6-214ENST00000616033 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
MSH6-214ENST00000616033 K7ERS5 55 aa7.2□□□□□ -1.26
MSH6-214ENST00000616033 DNAH5Q8TE73 4624 aa7.17□□□□□ -1.26
MSH6-214ENST00000616033 VPS13BQ7Z7G8 4022 aa7.15□□□□□ -1.27
MSH6-214ENST00000616033 H1FX-AS1Q4G0G2 97 aa7.14□□□□□ -1.27
MSH6-214ENST00000616033 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
MSH6-214ENST00000616033 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
MSH6-214ENST00000616033 PKHD1P08F94 4074 aa7.09□□□□□ -1.28
MSH6-214ENST00000616033 FAT2Q9NYQ8 4349 aa7.07□□□□□ -1.28
MSH6-214ENST00000616033 COX6B2Q6YFQ2 88 aa7.06□□□□□ -1.28
MSH6-214ENST00000616033 SACSQ9NZJ4 4579 aa7.04□□□□□ -1.28
MSH6-214ENST00000616033 FAT1Q14517 4588 aa7.03□□□□□ -1.28
MSH6-214ENST00000616033 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
MSH6-214ENST00000616033 KMT2CQ8NEZ4 4911 aaKnown RBP7.01□□□□□ -1.29
MSH6-214ENST00000616033 PKD1P98161 4303 aa7.01□□□□□ -1.29
MSH6-214ENST00000616033 DYNC1H1Q14204 4646 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms