RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 TLX1NBP0CAT3 122 aa4.23□□□□□ -1.73
CDKAL1-204ENST00000613575 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
CDKAL1-204ENST00000613575 REG3GQ6UW15 175 aa4.23□□□□□ -1.73
CDKAL1-204ENST00000613575 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
CDKAL1-204ENST00000613575 KRTAP16-1A8MUX0 517 aa4.22□□□□□ -1.73
CDKAL1-204ENST00000613575 CDK2AP2O75956 126 aa4.22□□□□□ -1.73
CDKAL1-204ENST00000613575 SEC61BP60468 96 aaKnown RBP4.21□□□□□ -1.74
CDKAL1-204ENST00000613575 SPATA8Q6RVD6 105 aa4.21□□□□□ -1.74
CDKAL1-204ENST00000613575 PRKDCP78527 4128 aaKnown RBP4.2□□□□□ -1.74
CDKAL1-204ENST00000613575 IGLV5-37A0A075B6J1 123 aa4.19□□□□□ -1.74
CDKAL1-204ENST00000613575 IGKV2D-24A0A075B6R9 120 aa4.19□□□□□ -1.74
CDKAL1-204ENST00000613575 DNAH3Q8TD57 4116 aa4.19□□□□□ -1.74
CDKAL1-204ENST00000613575 K7EIL1 84 aa4.17□□□□□ -1.74
CDKAL1-204ENST00000613575 SPRR1AP35321 89 aa4.17□□□□□ -1.74
CDKAL1-204ENST00000613575 CMYA5Q8N3K9 4069 aa4.17□□□□□ -1.74
CDKAL1-204ENST00000613575 KRTAP4-16G5E9R7 235 aaPredicted RBP4.16□□□□□ -1.74
CDKAL1-204ENST00000613575 DSCR10P59022 87 aa4.16□□□□□ -1.74
CDKAL1-204ENST00000613575 C7orf33Q8WU49 177 aa4.16□□□□□ -1.74
CDKAL1-204ENST00000613575 K7EQZ3 153 aa4.16□□□□□ -1.74
CDKAL1-204ENST00000613575 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
CDKAL1-204ENST00000613575 IGLV1-50A0A075B6I6 118 aa4.15□□□□□ -1.75
CDKAL1-204ENST00000613575 IGLV5-48A0A075B6I7 105 aa4.15□□□□□ -1.75
CDKAL1-204ENST00000613575 UQCR11O14957 56 aa4.14□□□□□ -1.75
CDKAL1-204ENST00000613575 KRTAP7-1Q8IUC3 87 aa4.14□□□□□ -1.75
CDKAL1-204ENST00000613575 DHRS4-AS1Q9P1J3 65 aa4.14□□□□□ -1.75
CDKAL1-204ENST00000613575 CASC10Q5T4H9 136 aa4.13□□□□□ -1.75
CDKAL1-204ENST00000613575 Q8N377 158 aa4.13□□□□□ -1.75
CDKAL1-204ENST00000613575 SPRR4Q96PI1 79 aa4.13□□□□□ -1.75
CDKAL1-204ENST00000613575 A0A087WSZ3 146 aa4.13□□□□□ -1.75
CDKAL1-204ENST00000613575 Q6ZRX8 168 aa4.13□□□□□ -1.75
CDKAL1-204ENST00000613575 DNAH1Q9P2D7 4330 aa4.12□□□□□ -1.75
CDKAL1-204ENST00000613575 HUWE1Q7Z6Z7 4374 aaKnown RBP4.12□□□□□ -1.75
CDKAL1-204ENST00000613575 KIAA1109Q2LD37 5005 aa4.12□□□□□ -1.75
CDKAL1-204ENST00000613575 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
CDKAL1-204ENST00000613575 Q8NBF4 154 aa4.12□□□□□ -1.75
CDKAL1-204ENST00000613575 TENM3Q9P273 2699 aa4.12□□□□□ -1.75
CDKAL1-204ENST00000613575 K7ERS5 55 aa4.11□□□□□ -1.75
CDKAL1-204ENST00000613575 P0C880 135 aa4.11□□□□□ -1.75
CDKAL1-204ENST00000613575 LINC00483Q53H64 154 aa4.11□□□□□ -1.75
CDKAL1-204ENST00000613575 WFDC13Q8IUB5 93 aa4.11□□□□□ -1.75
CDKAL1-204ENST00000613575 FAM168BA1KXE4 195 aa4.1□□□□□ -1.75
CDKAL1-204ENST00000613575 ZNF861PO60384 105 aa4.1□□□□□ -1.75
CDKAL1-204ENST00000613575 HRES1P13985 223 aa4.1□□□□□ -1.75
CDKAL1-204ENST00000613575 C1orf137Q5JT78 98 aa4.1□□□□□ -1.75
CDKAL1-204ENST00000613575 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
CDKAL1-204ENST00000613575 APLNQ9ULZ1 77 aa4.1□□□□□ -1.75
CDKAL1-204ENST00000613575 A0A1B0GU69 56 aa4.09□□□□□ -1.76
CDKAL1-204ENST00000613575 CHTF8P0CG12 524 aa4.09□□□□□ -1.76
CDKAL1-204ENST00000613575 RPL37AP8A6NKH3 93 aa4.08□□□□□ -1.76
CDKAL1-204ENST00000613575 KRTAP1-5Q9BYS1 174 aa4.08□□□□□ -1.76
CDKAL1-204ENST00000613575 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CDKAL1-204ENST00000613575 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
CDKAL1-204ENST00000613575 A8MWP4 228 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 IGKV2-30P06310 120 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 C14orf177Q52M58 125 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 DEFB105AQ8NG35 78 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 C20orf166-AS1Q96NR2 134 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 TP53AIP1Q9HCN2 124 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 IGLV8-61A0A075B6I0 122 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 A0A1W2PNN7 141 aa4.06□□□□□ -1.76
CDKAL1-204ENST00000613575 DYNC2H1Q8NCM8 4307 aaKnown RBP4.05□□□□□ -1.76
CDKAL1-204ENST00000613575 A0A096LNI7 61 aa4.04□□□□□ -1.76
CDKAL1-204ENST00000613575 DEFB116Q30KQ4 102 aa4.04□□□□□ -1.76
CDKAL1-204ENST00000613575 PCOTHQ58A44 107 aa4.04□□□□□ -1.76
CDKAL1-204ENST00000613575 DNAH9Q9NYC9 4486 aa4.04□□□□□ -1.76
CDKAL1-204ENST00000613575 NUPR2A6NF83 97 aa4.03□□□□□ -1.76
CDKAL1-204ENST00000613575 SPRR1BP22528 89 aa4.03□□□□□ -1.76
CDKAL1-204ENST00000613575 C8orf17Q9NRJ1 99 aa4.03□□□□□ -1.76
CDKAL1-204ENST00000613575 IGLV5-52A0A0A0MRZ9 124 aa4.03□□□□□ -1.76
CDKAL1-204ENST00000613575 A8MUU9 505 aa4.03□□□□□ -1.76
CDKAL1-204ENST00000613575 ACYP2P14621 99 aa4.03□□□□□ -1.76
CDKAL1-204ENST00000613575 Q6ZRN7 208 aaPredicted RBP4.02□□□□□ -1.77
CDKAL1-204ENST00000613575 NBDYA0A0U1RRE5 68 aa4.01□□□□□ -1.77
CDKAL1-204ENST00000613575 UBE2DNLQ8IWF7 75 aa4.01□□□□□ -1.77
CDKAL1-204ENST00000613575 SACSQ9NZJ4 4579 aa4.01□□□□□ -1.77
CDKAL1-204ENST00000613575 NDUFAF8A1L188 74 aa4□□□□□ -1.77
CDKAL1-204ENST00000613575 IGKV2-24A0A0C4DH68 120 aa4□□□□□ -1.77
CDKAL1-204ENST00000613575 IGFL1Q6UW32 110 aa4□□□□□ -1.77
CDKAL1-204ENST00000613575 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
CDKAL1-204ENST00000613575 PRLHP81277 87 aa3.98□□□□□ -1.77
CDKAL1-204ENST00000613575 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
CDKAL1-204ENST00000613575 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
CDKAL1-204ENST00000613575 STAB2Q8WWQ8 2551 aa3.97□□□□□ -1.77
CDKAL1-204ENST00000613575 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
CDKAL1-204ENST00000613575 LINC00472Q9H8W2 130 aa3.97□□□□□ -1.77
CDKAL1-204ENST00000613575 HERC1Q15751 4861 aa3.96□□□□□ -1.78
CDKAL1-204ENST00000613575 DNAH10Q8IVF4 4471 aa3.95□□□□□ -1.78
CDKAL1-204ENST00000613575 Q5W150 140 aa3.95□□□□□ -1.78
CDKAL1-204ENST00000613575 A0A087WTM6 91 aa3.94□□□□□ -1.78
CDKAL1-204ENST00000613575 PANO1I0J062 215 aa3.94□□□□□ -1.78
CDKAL1-204ENST00000613575 IGLV7-43P04211 117 aa3.94□□□□□ -1.78
CDKAL1-204ENST00000613575 RPL37AP61513 92 aaKnown RBP3.94□□□□□ -1.78
CDKAL1-204ENST00000613575 SPACA4Q8TDM5 124 aa3.94□□□□□ -1.78
CDKAL1-204ENST00000613575 PLECQ15149 4684 aaKnown RBP3.94□□□□□ -1.78
CDKAL1-204ENST00000613575 A0A0G2JQZ4 141 aa3.94□□□□□ -1.78
CDKAL1-204ENST00000613575 VPS13DQ5THJ4 4388 aa3.93□□□□□ -1.78
CDKAL1-204ENST00000613575 MMP24-AS1A0A0U1RRL7 71 aa3.93□□□□□ -1.78
CDKAL1-204ENST00000613575 TENM2Q9NT68 2774 aa3.91□□□□□ -1.78
CDKAL1-204ENST00000613575 COL7A1Q02388 2944 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms