RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 DSCR10P59022 87 aa6.68□□□□□ -1.34
PCDHGC3-202ENST00000611950 CNBPP62633 177 aaKnown RBP6.68□□□□□ -1.34
PCDHGC3-202ENST00000611950 A0A087WSZ3 146 aa6.67□□□□□ -1.34
PCDHGC3-202ENST00000611950 HYDINQ4G0P3 5121 aa6.67□□□□□ -1.34
PCDHGC3-202ENST00000611950 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
PCDHGC3-202ENST00000611950 KRTAP11-1Q8IUC1 163 aa6.66□□□□□ -1.34
PCDHGC3-202ENST00000611950 IGFL1Q6UW32 110 aa6.65□□□□□ -1.34
PCDHGC3-202ENST00000611950 UBE2DNLQ8IWF7 75 aa6.65□□□□□ -1.35
PCDHGC3-202ENST00000611950 COA5Q86WW8 74 aa6.63□□□□□ -1.35
PCDHGC3-202ENST00000611950 LY6G6CO95867 125 aa6.62□□□□□ -1.35
PCDHGC3-202ENST00000611950 SPRR4Q96PI1 79 aa6.61□□□□□ -1.35
PCDHGC3-202ENST00000611950 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
PCDHGC3-202ENST00000611950 KRTAP16-1A8MUX0 517 aa6.6□□□□□ -1.35
PCDHGC3-202ENST00000611950 P0C880 135 aa6.6□□□□□ -1.35
PCDHGC3-202ENST00000611950 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
PCDHGC3-202ENST00000611950 FRAS1Q86XX4 4008 aa6.59□□□□□ -1.35
PCDHGC3-202ENST00000611950 PANO1I0J062 215 aa6.58□□□□□ -1.36
PCDHGC3-202ENST00000611950 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
PCDHGC3-202ENST00000611950 APLNQ9ULZ1 77 aa6.57□□□□□ -1.36
PCDHGC3-202ENST00000611950 A0A1B0GW54 56 aa6.56□□□□□ -1.36
PCDHGC3-202ENST00000611950 IGLV9-49A0A0B4J1Y8 123 aa6.54□□□□□ -1.36
PCDHGC3-202ENST00000611950 H0Y9P7 68 aa6.54□□□□□ -1.36
PCDHGC3-202ENST00000611950 ALMS1Q8TCU4 4167 aa6.53□□□□□ -1.36
PCDHGC3-202ENST00000611950 NUPR2A6NF83 97 aa6.52□□□□□ -1.37
PCDHGC3-202ENST00000611950 SEC61BP60468 96 aaKnown RBP6.52□□□□□ -1.37
PCDHGC3-202ENST00000611950 PCLOQ9Y6V0 5065 aa6.51□□□□□ -1.37
PCDHGC3-202ENST00000611950 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
PCDHGC3-202ENST00000611950 CDK2AP2O75956 126 aa6.5□□□□□ -1.37
PCDHGC3-202ENST00000611950 C9orf163Q8N9P6 203 aa6.5□□□□□ -1.37
PCDHGC3-202ENST00000611950 ANAPC11Q9NYG5 84 aa6.5□□□□□ -1.37
PCDHGC3-202ENST00000611950 H3BPC8 53 aa6.49□□□□□ -1.37
PCDHGC3-202ENST00000611950 IGLV7-46A0A075B6I9 117 aa6.48□□□□□ -1.37
PCDHGC3-202ENST00000611950 C14orf177Q52M58 125 aa6.48□□□□□ -1.37
PCDHGC3-202ENST00000611950 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
PCDHGC3-202ENST00000611950 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.48□□□□□ -1.37
PCDHGC3-202ENST00000611950 IGLV8-61A0A075B6I0 122 aa6.47□□□□□ -1.37
PCDHGC3-202ENST00000611950 NBDYA0A0U1RRE5 68 aa6.47□□□□□ -1.37
PCDHGC3-202ENST00000611950 Q6ZRN7 208 aaPredicted RBP6.46□□□□□ -1.37
PCDHGC3-202ENST00000611950 HERC2O95714 4834 aa6.46□□□□□ -1.37
PCDHGC3-202ENST00000611950 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.38
PCDHGC3-202ENST00000611950 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
PCDHGC3-202ENST00000611950 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
PCDHGC3-202ENST00000611950 KRTAP29-1A8MX34 341 aaPredicted RBP6.44□□□□□ -1.38
PCDHGC3-202ENST00000611950 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
PCDHGC3-202ENST00000611950 LINC00472Q9H8W2 130 aa6.43□□□□□ -1.38
PCDHGC3-202ENST00000611950 A8MWP4 228 aa6.43□□□□□ -1.38
PCDHGC3-202ENST00000611950 SPRR1BP22528 89 aa6.43□□□□□ -1.38
PCDHGC3-202ENST00000611950 RYR1P21817 5038 aa6.42□□□□□ -1.38
PCDHGC3-202ENST00000611950 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
PCDHGC3-202ENST00000611950 DNAH2Q9P225 4427 aa6.41□□□□□ -1.38
PCDHGC3-202ENST00000611950 HECTD4Q9Y4D8 3996 aa6.41□□□□□ -1.38
PCDHGC3-202ENST00000611950 KRTAP13-1Q8IUC0 172 aa6.4□□□□□ -1.38
PCDHGC3-202ENST00000611950 ZNF861PO60384 105 aa6.4□□□□□ -1.38
PCDHGC3-202ENST00000611950 SPINK6Q6UWN8 80 aa6.39□□□□□ -1.39
PCDHGC3-202ENST00000611950 MMP24-AS1A0A0U1RRL7 71 aa6.39□□□□□ -1.39
PCDHGC3-202ENST00000611950 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
PCDHGC3-202ENST00000611950 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
PCDHGC3-202ENST00000611950 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
PCDHGC3-202ENST00000611950 DNAH17Q9UFH2 4485 aa6.37□□□□□ -1.39
PCDHGC3-202ENST00000611950 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
PCDHGC3-202ENST00000611950 A0A087WTM6 91 aa6.35□□□□□ -1.39
PCDHGC3-202ENST00000611950 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
PCDHGC3-202ENST00000611950 Q96NJ1 140 aa6.35□□□□□ -1.39
PCDHGC3-202ENST00000611950 PKHD1P08F94 4074 aa6.34□□□□□ -1.39
PCDHGC3-202ENST00000611950 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.39
PCDHGC3-202ENST00000611950 HRES1P13985 223 aa6.34□□□□□ -1.4
PCDHGC3-202ENST00000611950 LUZP6Q538Z0 58 aa6.34□□□□□ -1.4
PCDHGC3-202ENST00000611950 DNAH6Q9C0G6 4158 aa6.33□□□□□ -1.4
PCDHGC3-202ENST00000611950 A0A1B0GVY2 172 aa6.31□□□□□ -1.4
PCDHGC3-202ENST00000611950 A8MUU9 505 aa6.31□□□□□ -1.4
PCDHGC3-202ENST00000611950 CIRBP-AS1Q8TBR5 109 aa6.31□□□□□ -1.4
PCDHGC3-202ENST00000611950 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
PCDHGC3-202ENST00000611950 IGLV5-52A0A0A0MRZ9 124 aa6.3□□□□□ -1.4
PCDHGC3-202ENST00000611950 ABCA13Q86UQ4 5058 aa6.27□□□□□ -1.41
PCDHGC3-202ENST00000611950 A0A1B0GVX0 72 aa6.27□□□□□ -1.41
PCDHGC3-202ENST00000611950 UQCR11O14957 56 aa6.25□□□□□ -1.41
PCDHGC3-202ENST00000611950 FAT2Q9NYQ8 4349 aa6.25□□□□□ -1.41
PCDHGC3-202ENST00000611950 DNAH11Q96DT5 4516 aa6.25□□□□□ -1.41
PCDHGC3-202ENST00000611950 MRPL34Q9BQ48 92 aaKnown RBP6.23□□□□□ -1.41
PCDHGC3-202ENST00000611950 Q5W150 140 aa6.22□□□□□ -1.41
PCDHGC3-202ENST00000611950 DNAH5Q8TE73 4624 aa6.22□□□□□ -1.41
PCDHGC3-202ENST00000611950 PKD1P98161 4303 aa6.22□□□□□ -1.41
PCDHGC3-202ENST00000611950 A0A1B0GU69 56 aa6.21□□□□□ -1.42
PCDHGC3-202ENST00000611950 LCE2CQ5TA81 110 aa6.21□□□□□ -1.42
PCDHGC3-202ENST00000611950 K7ERS5 55 aa6.2□□□□□ -1.42
PCDHGC3-202ENST00000611950 TP53AIP1Q9HCN2 124 aa6.19□□□□□ -1.42
PCDHGC3-202ENST00000611950 IGLV7-43P04211 117 aa6.18□□□□□ -1.42
PCDHGC3-202ENST00000611950 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
PCDHGC3-202ENST00000611950 DYNC1H1Q14204 4646 aaKnown RBP6.16□□□□□ -1.42
PCDHGC3-202ENST00000611950 DMAC1Q96GE9 116 aa6.16□□□□□ -1.42
PCDHGC3-202ENST00000611950 DMBT1Q9UGM3 2413 aaPredicted RBP6.16□□□□□ -1.42
PCDHGC3-202ENST00000611950 HSPG2P98160 4391 aa6.16□□□□□ -1.42
PCDHGC3-202ENST00000611950 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
PCDHGC3-202ENST00000611950 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
PCDHGC3-202ENST00000611950 Q8N1X5 172 aa6.14□□□□□ -1.43
PCDHGC3-202ENST00000611950 LCE2AQ5TA79 106 aaPredicted RBP6.12□□□□□ -1.43
PCDHGC3-202ENST00000611950 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
PCDHGC3-202ENST00000611950 HERC1Q15751 4861 aa6.1□□□□□ -1.43
PCDHGC3-202ENST00000611950 VPS13BQ7Z7G8 4022 aa6.09□□□□□ -1.43
PCDHGC3-202ENST00000611950 LINC00304Q8N9R0 145 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms