RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CDK2AP2O75956 126 aa7.49□□□□□ -1.21
CTCFL-218ENST00000608440 LINC01556Q5JQF7 62 aa7.49□□□□□ -1.21
CTCFL-218ENST00000608440 HUWE1Q7Z6Z7 4374 aaKnown RBP7.49□□□□□ -1.21
CTCFL-218ENST00000608440 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
CTCFL-218ENST00000608440 IGLV9-49A0A0B4J1Y8 123 aa7.49□□□□□ -1.21
CTCFL-218ENST00000608440 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
CTCFL-218ENST00000608440 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
CTCFL-218ENST00000608440 KRTAP11-1Q8IUC1 163 aa7.48□□□□□ -1.21
CTCFL-218ENST00000608440 P0C880 135 aa7.46□□□□□ -1.21
CTCFL-218ENST00000608440 MEGF8Q7Z7M0 2845 aa7.44□□□□□ -1.22
CTCFL-218ENST00000608440 FLG2Q5D862 2391 aaPredicted RBP7.44□□□□□ -1.22
CTCFL-218ENST00000608440 H3BNG1 76 aa7.44□□□□□ -1.22
CTCFL-218ENST00000608440 SPRR1BP22528 89 aa7.44□□□□□ -1.22
CTCFL-218ENST00000608440 CRIPTQ9P021 101 aa7.44□□□□□ -1.22
CTCFL-218ENST00000608440 DNAH9Q9NYC9 4486 aa7.42□□□□□ -1.22
CTCFL-218ENST00000608440 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
CTCFL-218ENST00000608440 A8MUU9 505 aa7.4□□□□□ -1.23
CTCFL-218ENST00000608440 DNAH10OSP0CZ25 163 aa7.4□□□□□ -1.23
CTCFL-218ENST00000608440 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
CTCFL-218ENST00000608440 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
CTCFL-218ENST00000608440 PRKDCP78527 4128 aaKnown RBP7.39□□□□□ -1.23
CTCFL-218ENST00000608440 CHTF8P0CG12 524 aa7.38□□□□□ -1.23
CTCFL-218ENST00000608440 LYSTQ99698 3801 aa7.36□□□□□ -1.23
CTCFL-218ENST00000608440 IGLV7-43P04211 117 aa7.36□□□□□ -1.23
CTCFL-218ENST00000608440 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
CTCFL-218ENST00000608440 A0A0A0MQY5 61 aa7.34□□□□□ -1.23
CTCFL-218ENST00000608440 SPINK1P00995 79 aa7.33□□□□□ -1.24
CTCFL-218ENST00000608440 KRTAP21-3Q3LHN1 58 aa7.33□□□□□ -1.24
CTCFL-218ENST00000608440 FBN3Q75N90 2809 aa7.32□□□□□ -1.24
CTCFL-218ENST00000608440 DNAH10Q8IVF4 4471 aa7.31□□□□□ -1.24
CTCFL-218ENST00000608440 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
CTCFL-218ENST00000608440 ANAPC11Q9NYG5 84 aa7.29□□□□□ -1.24
CTCFL-218ENST00000608440 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
CTCFL-218ENST00000608440 DNAH1Q9P2D7 4330 aa7.26□□□□□ -1.25
CTCFL-218ENST00000608440 SSBP3-AS1Q7Z2R9 100 aa7.26□□□□□ -1.25
CTCFL-218ENST00000608440 APLNQ9ULZ1 77 aa7.26□□□□□ -1.25
CTCFL-218ENST00000608440 H0YAA0 97 aa7.25□□□□□ -1.25
CTCFL-218ENST00000608440 NUPR2A6NF83 97 aa7.24□□□□□ -1.25
CTCFL-218ENST00000608440 TGP01266 2768 aa7.24□□□□□ -1.25
CTCFL-218ENST00000608440 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
CTCFL-218ENST00000608440 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
CTCFL-218ENST00000608440 KRTAP1-5Q9BYS1 174 aa7.22□□□□□ -1.25
CTCFL-218ENST00000608440 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.25
CTCFL-218ENST00000608440 SPINT4Q6UDR6 99 aa7.21□□□□□ -1.25
CTCFL-218ENST00000608440 Q6ZSA8 131 aa7.21□□□□□ -1.25
CTCFL-218ENST00000608440 STARD9Q9P2P6 4700 aa7.21□□□□□ -1.26
CTCFL-218ENST00000608440 DYNC2H1Q8NCM8 4307 aaKnown RBP7.2□□□□□ -1.26
CTCFL-218ENST00000608440 PLECQ15149 4684 aaKnown RBP7.2□□□□□ -1.26
CTCFL-218ENST00000608440 DNAH7Q8WXX0 4024 aa7.19□□□□□ -1.26
CTCFL-218ENST00000608440 FAM229AH3BQW9 127 aa7.19□□□□□ -1.26
CTCFL-218ENST00000608440 KRTAP13-1Q8IUC0 172 aa7.18□□□□□ -1.26
CTCFL-218ENST00000608440 LY6G6CO95867 125 aa7.16□□□□□ -1.26
CTCFL-218ENST00000608440 WWC2-AS2Q96NR7 200 aa7.16□□□□□ -1.26
CTCFL-218ENST00000608440 C14orf177Q52M58 125 aa7.16□□□□□ -1.26
CTCFL-218ENST00000608440 PANO1I0J062 215 aa7.15□□□□□ -1.26
CTCFL-218ENST00000608440 PSORS1C2Q9UIG4 136 aa7.14□□□□□ -1.27
CTCFL-218ENST00000608440 KRTAP16-1A8MUX0 517 aa7.14□□□□□ -1.27
CTCFL-218ENST00000608440 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
CTCFL-218ENST00000608440 NBDYA0A0U1RRE5 68 aa7.12□□□□□ -1.27
CTCFL-218ENST00000608440 Q8N1X5 172 aa7.12□□□□□ -1.27
CTCFL-218ENST00000608440 CIRBP-AS1Q8TBR5 109 aa7.11□□□□□ -1.27
CTCFL-218ENST00000608440 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
CTCFL-218ENST00000608440 A0A087WTM6 91 aa7.09□□□□□ -1.27
CTCFL-218ENST00000608440 A0A1B0GU33 70 aa7.09□□□□□ -1.27
CTCFL-218ENST00000608440 VPS13DQ5THJ4 4388 aa7.09□□□□□ -1.28
CTCFL-218ENST00000608440 FRAS1Q86XX4 4008 aa7.08□□□□□ -1.28
CTCFL-218ENST00000608440 Q6ZRN7 208 aaPredicted RBP7.04□□□□□ -1.28
CTCFL-218ENST00000608440 K7ERS5 55 aa7.02□□□□□ -1.29
CTCFL-218ENST00000608440 KMT2AQ03164 3969 aa7.02□□□□□ -1.29
CTCFL-218ENST00000608440 H1FX-AS1Q4G0G2 97 aa7□□□□□ -1.29
CTCFL-218ENST00000608440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
CTCFL-218ENST00000608440 DNAH8Q96JB1 4490 aa6.99□□□□□ -1.29
CTCFL-218ENST00000608440 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
CTCFL-218ENST00000608440 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
CTCFL-218ENST00000608440 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
CTCFL-218ENST00000608440 DNAH2Q9P225 4427 aa6.95□□□□□ -1.3
CTCFL-218ENST00000608440 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
CTCFL-218ENST00000608440 DNAH17Q9UFH2 4485 aa6.93□□□□□ -1.3
CTCFL-218ENST00000608440 HYDINQ4G0P3 5121 aa6.9□□□□□ -1.3
CTCFL-218ENST00000608440 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.3
CTCFL-218ENST00000608440 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
CTCFL-218ENST00000608440 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
CTCFL-218ENST00000608440 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
CTCFL-218ENST00000608440 KRTAP10-2P60368 255 aa6.83□□□□□ -1.32
CTCFL-218ENST00000608440 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
CTCFL-218ENST00000608440 SACSQ9NZJ4 4579 aa6.81□□□□□ -1.32
CTCFL-218ENST00000608440 A0A0D9SG42 100 aa6.81□□□□□ -1.32
CTCFL-218ENST00000608440 RPL37P61927 97 aaKnown RBP6.78□□□□□ -1.32
CTCFL-218ENST00000608440 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
CTCFL-218ENST00000608440 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
CTCFL-218ENST00000608440 DNAH5Q8TE73 4624 aa6.74□□□□□ -1.33
CTCFL-218ENST00000608440 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
CTCFL-218ENST00000608440 KMT2CQ8NEZ4 4911 aaKnown RBP6.73□□□□□ -1.33
CTCFL-218ENST00000608440 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
CTCFL-218ENST00000608440 RYR2Q92736 4967 aa6.72□□□□□ -1.33
CTCFL-218ENST00000608440 PKD1P98161 4303 aa6.71□□□□□ -1.34
CTCFL-218ENST00000608440 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
CTCFL-218ENST00000608440 PKHD1P08F94 4074 aa6.68□□□□□ -1.34
CTCFL-218ENST00000608440 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
CTCFL-218ENST00000608440 A0A1B0GVY2 172 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms