RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 KRTAP7-1Q8IUC3 87 aa4.63□□□□□ -1.67
HCG18-244ENST00000602516 LYSTQ99698 3801 aa4.63□□□□□ -1.67
HCG18-244ENST00000602516 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
HCG18-244ENST00000602516 SPRR1AP35321 89 aa4.63□□□□□ -1.67
HCG18-244ENST00000602516 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
HCG18-244ENST00000602516 FAM168BA1KXE4 195 aa4.62□□□□□ -1.67
HCG18-244ENST00000602516 KRTAP1-5Q9BYS1 174 aa4.62□□□□□ -1.67
HCG18-244ENST00000602516 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
HCG18-244ENST00000602516 APLNQ9ULZ1 77 aa4.62□□□□□ -1.67
HCG18-244ENST00000602516 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
HCG18-244ENST00000602516 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
HCG18-244ENST00000602516 PRKDCP78527 4128 aaKnown RBP4.62□□□□□ -1.67
HCG18-244ENST00000602516 DNAH10Q8IVF4 4471 aa4.61□□□□□ -1.67
HCG18-244ENST00000602516 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
HCG18-244ENST00000602516 Q6ZRX8 168 aa4.6□□□□□ -1.67
HCG18-244ENST00000602516 NUPR2A6NF83 97 aa4.6□□□□□ -1.67
HCG18-244ENST00000602516 UQCR11O14957 56 aa4.6□□□□□ -1.67
HCG18-244ENST00000602516 DSCR10P59022 87 aa4.6□□□□□ -1.67
HCG18-244ENST00000602516 Q8N377 158 aa4.59□□□□□ -1.67
HCG18-244ENST00000602516 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
HCG18-244ENST00000602516 Q5W150 140 aa4.59□□□□□ -1.67
HCG18-244ENST00000602516 CSMD3Q7Z407 3707 aa4.59□□□□□ -1.68
HCG18-244ENST00000602516 HRES1P13985 223 aa4.59□□□□□ -1.68
HCG18-244ENST00000602516 DMAC1Q96GE9 116 aa4.59□□□□□ -1.68
HCG18-244ENST00000602516 DNAH7Q8WXX0 4024 aa4.59□□□□□ -1.68
HCG18-244ENST00000602516 IGLV5-48A0A075B6I7 105 aa4.58□□□□□ -1.68
HCG18-244ENST00000602516 A0A1B0GVX0 72 aa4.58□□□□□ -1.68
HCG18-244ENST00000602516 K7EQZ3 153 aa4.57□□□□□ -1.68
HCG18-244ENST00000602516 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
HCG18-244ENST00000602516 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
HCG18-244ENST00000602516 UBE2DNLQ8IWF7 75 aa4.56□□□□□ -1.68
HCG18-244ENST00000602516 A0A087WTM6 91 aa4.56□□□□□ -1.68
HCG18-244ENST00000602516 A0A096LNI7 61 aa4.56□□□□□ -1.68
HCG18-244ENST00000602516 C14orf177Q52M58 125 aa4.55□□□□□ -1.68
HCG18-244ENST00000602516 DEFB105AQ8NG35 78 aa4.55□□□□□ -1.68
HCG18-244ENST00000602516 STAB2Q8WWQ8 2551 aa4.55□□□□□ -1.68
HCG18-244ENST00000602516 TGP01266 2768 aa4.54□□□□□ -1.68
HCG18-244ENST00000602516 IGLV8-61A0A075B6I0 122 aa4.54□□□□□ -1.68
HCG18-244ENST00000602516 A0A1W2PNN7 141 aa4.54□□□□□ -1.68
HCG18-244ENST00000602516 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
HCG18-244ENST00000602516 NBDYA0A0U1RRE5 68 aa4.53□□□□□ -1.68
HCG18-244ENST00000602516 Q6ZRN7 208 aaPredicted RBP4.53□□□□□ -1.68
HCG18-244ENST00000602516 PANO1I0J062 215 aa4.52□□□□□ -1.69
HCG18-244ENST00000602516 DEFB116Q30KQ4 102 aa4.52□□□□□ -1.69
HCG18-244ENST00000602516 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
HCG18-244ENST00000602516 STARD9Q9P2P6 4700 aa4.52□□□□□ -1.69
HCG18-244ENST00000602516 A0A1B0GU69 56 aa4.51□□□□□ -1.69
HCG18-244ENST00000602516 VPS13DQ5THJ4 4388 aa4.51□□□□□ -1.69
HCG18-244ENST00000602516 KRTAP29-1A8MX34 341 aaPredicted RBP4.51□□□□□ -1.69
HCG18-244ENST00000602516 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
HCG18-244ENST00000602516 KRTAP10-2P60368 255 aa4.5□□□□□ -1.69
HCG18-244ENST00000602516 KRTAP11-1Q8IUC1 163 aa4.5□□□□□ -1.69
HCG18-244ENST00000602516 Q8NBF4 154 aa4.5□□□□□ -1.69
HCG18-244ENST00000602516 PRLHP81277 87 aa4.48□□□□□ -1.69
HCG18-244ENST00000602516 WFDC13Q8IUB5 93 aa4.48□□□□□ -1.69
HCG18-244ENST00000602516 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
HCG18-244ENST00000602516 TENM2Q9NT68 2774 aa4.47□□□□□ -1.69
HCG18-244ENST00000602516 ALMS1Q8TCU4 4167 aa4.47□□□□□ -1.69
HCG18-244ENST00000602516 SPRR1BP22528 89 aa4.47□□□□□ -1.69
HCG18-244ENST00000602516 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
HCG18-244ENST00000602516 IGFL1Q6UW32 110 aa4.46□□□□□ -1.7
HCG18-244ENST00000602516 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
HCG18-244ENST00000602516 Q8N1X5 172 aa4.46□□□□□ -1.7
HCG18-244ENST00000602516 Q96NJ1 140 aa4.45□□□□□ -1.7
HCG18-244ENST00000602516 KRTAP13-1Q8IUC0 172 aa4.45□□□□□ -1.7
HCG18-244ENST00000602516 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
HCG18-244ENST00000602516 KMT2AQ03164 3969 aa4.44□□□□□ -1.7
HCG18-244ENST00000602516 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
HCG18-244ENST00000602516 HECTD4Q9Y4D8 3996 aa4.44□□□□□ -1.7
HCG18-244ENST00000602516 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
HCG18-244ENST00000602516 KRTAP9-2Q9BYQ4 174 aa4.43□□□□□ -1.7
HCG18-244ENST00000602516 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
HCG18-244ENST00000602516 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
HCG18-244ENST00000602516 DNAH17Q9UFH2 4485 aa4.42□□□□□ -1.7
HCG18-244ENST00000602516 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
HCG18-244ENST00000602516 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
HCG18-244ENST00000602516 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.7
HCG18-244ENST00000602516 IGLV7-43P04211 117 aa4.39□□□□□ -1.71
HCG18-244ENST00000602516 DNAH6Q9C0G6 4158 aa4.39□□□□□ -1.71
HCG18-244ENST00000602516 CRIPTQ9P021 101 aa4.39□□□□□ -1.71
HCG18-244ENST00000602516 DNAH8Q96JB1 4490 aa4.38□□□□□ -1.71
HCG18-244ENST00000602516 KMT2CQ8NEZ4 4911 aaKnown RBP4.38□□□□□ -1.71
HCG18-244ENST00000602516 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
HCG18-244ENST00000602516 SACSQ9NZJ4 4579 aa4.36□□□□□ -1.71
HCG18-244ENST00000602516 FRAS1Q86XX4 4008 aa4.36□□□□□ -1.71
HCG18-244ENST00000602516 PSORS1C2Q9UIG4 136 aa4.35□□□□□ -1.71
HCG18-244ENST00000602516 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
HCG18-244ENST00000602516 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
HCG18-244ENST00000602516 ACYP2P14621 99 aa4.34□□□□□ -1.72
HCG18-244ENST00000602516 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.72
HCG18-244ENST00000602516 RYR3Q15413 4870 aa4.34□□□□□ -1.72
HCG18-244ENST00000602516 RYR2Q92736 4967 aa4.33□□□□□ -1.72
HCG18-244ENST00000602516 LY6G6CO95867 125 aa4.33□□□□□ -1.72
HCG18-244ENST00000602516 DNAH5Q8TE73 4624 aa4.33□□□□□ -1.72
HCG18-244ENST00000602516 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
HCG18-244ENST00000602516 DNAH11Q96DT5 4516 aa4.32□□□□□ -1.72
HCG18-244ENST00000602516 FLG2Q5D862 2391 aaPredicted RBP4.3□□□□□ -1.72
HCG18-244ENST00000602516 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
HCG18-244ENST00000602516 TP53AIP1Q9HCN2 124 aa4.29□□□□□ -1.72
HCG18-244ENST00000602516 PKD1P98161 4303 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms