RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 LINC00208Q96KT6 92 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 TMEM242Q9NWH2 141 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 MRPL35Q9NZE8 188 aaKnown RBP0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 CACFD1Q9UGQ2 172 aa0.75□□□□□ -2.29
SMCHD1-205ENST00000581383 TRBV25-1A0A075B6N4 114 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 TRBV6-1A0A0K0K1D8 114 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 J3QR89 54 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 UBE2G1P62253 170 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 S100A12P80511 92 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 SPANXN1Q5VSR9 72 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 Q6ZUT4 128 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 DPH3Q96FX2 82 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 DPH3P1Q9H4G8 78 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 GNG13Q9P2W3 67 aa0.74□□□□□ -2.29
SMCHD1-205ENST00000581383 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 TRBV7-3A0A075B6L6 115 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 TRBV20-1A0A075B6N2 111 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 PIGBOS1A0A0B4J2F0 54 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 TRBV10-1A0A0K0K1A3 114 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 CTXND1A0A1B0GTU2 59 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 HIGD1CA8MV81 97 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 M0QY20 66 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 NMBP08949 121 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 SPAG11BQ08648 103 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 C9orf116Q5BN46 136 aaPredicted RBP0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 ATP11AUNQ6ZP68 121 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 BAGE2Q86Y30 109 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 AQP10Q96PS8 301 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 PSMG3Q9BT73 122 aaPredicted RBP0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 C10orf95Q9H7T3 257 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 TMEM167BQ9NRX6 74 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 PLAC8Q9NZF1 115 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 LENEPQ9Y5L5 61 aa0.73□□□□□ -2.29
SMCHD1-205ENST00000581383 A0A087WWC5 75 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 GVQW2A0A096LPI5 108 aaPredicted RBP0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 A0A0D9SG42 100 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 LINC00959A0A1B0GUT2 108 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 CCKP06307 115 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 RPL39P62891 51 aaKnown RBP0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 Q0VG73 95 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 C5orf38Q86SI9 138 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 KCNRGQ8N5I3 272 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 PPDPFLQ8WWR9 84 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 S100ZQ8WXG8 99 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 LINC01600Q96MT4 127 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 C6orf48Q9UBA6 75 aa0.72□□□□□ -2.29
SMCHD1-205ENST00000581383 KANTRA0A1W2PQU2 76 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 C7orf77A4D0Y5 90 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 K7EP13 123 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 FCER1GP30273 86 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 GNG4P50150 75 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 UBE2D1P51668 147 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 PRLHP81277 87 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 MRPL54Q6P161 138 aaKnown RBP0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 SPINK6Q6UWN8 80 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 ALKAL2Q6UX46 152 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 PLAC4Q8WY50 150 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 TOMM7Q9P0U1 55 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 UBE2D4Q9Y2X8 147 aa0.71□□□□□ -2.3
SMCHD1-205ENST00000581383 D6R8Y8 96 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 I3L3M4 83 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 NDUFA1O15239 70 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 PKIAP61925 76 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 SERF2P84101 59 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 ADIRFQ15847 76 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 ATOH7Q8N100 152 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 C9orf62Q8N4C0 152 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 VPS25Q9BRG1 176 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 ST20Q9HBF5 79 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 MANBALQ9NQG1 85 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 CDC42SE2Q9NRR3 84 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 ERG28Q9UKR5 140 aa0.7□□□□□ -2.3
SMCHD1-205ENST00000581383 UMAD1C9J7I0 102 aa0.69□□□□□ -2.3
SMCHD1-205ENST00000581383 SPINK8P0C7L1 97 aa0.69□□□□□ -2.3
SMCHD1-205ENST00000581383 LINC01545Q5VT33 79 aa0.69□□□□□ -2.3
SMCHD1-205ENST00000581383 TSKUQ8WUA8 353 aa0.69□□□□□ -2.3
SMCHD1-205ENST00000581383 TCEAL7Q9BRU2 100 aa0.69□□□□□ -2.3
SMCHD1-205ENST00000581383 SMIM2Q9BVW6 85 aa0.69□□□□□ -2.3
SMCHD1-205ENST00000581383 CNFNQ9BYD5 112 aa0.69□□□□□ -2.3
SMCHD1-205ENST00000581383 V9GYV3 84 aa0.69□□□□□ -2.3
SMCHD1-205ENST00000581383 A0A1B0GUT8 65 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 F2Z2F3 143 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 BCE1O60756 84 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 IFI27P40305 119 aaPredicted RBP0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 POLR2KP53803 58 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 PMCHL1Q16048 86 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 IFI27L1Q96BM0 104 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 C2orf88Q9BSF0 95 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 TMEM191AQ9H0A3 160 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 LINC00474Q9P2X8 69 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 CDKN2A-AS1Q9UH64 79 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 NDUFA12Q9UI09 145 aa0.68□□□□□ -2.3
SMCHD1-205ENST00000581383 SMIM27A0A1W2PRY6 76 aa0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 C9orf92A6NGG3 77 aa0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 F8VRH5 84 aa0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 NPC2P61916 151 aa0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 MT1HP80294 61 aa0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 KRTAP19-2Q3LHN2 52 aa0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 C9orf153Q5TBE3 101 aa0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 COX7B2Q8TF08 81 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms