RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 PKD1P98161 4303 aa1.99□□□□□ -2.09
NF1-220ENST00000581113 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
NF1-220ENST00000581113 TRGV2A0A075B6R0 118 aa1.99□□□□□ -2.09
NF1-220ENST00000581113 TRAV23DV6A0A075B6W5 121 aa1.99□□□□□ -2.09
NF1-220ENST00000581113 F2Z2F3 143 aa1.99□□□□□ -2.09
NF1-220ENST00000581113 H3BNG1 76 aa1.99□□□□□ -2.09
NF1-220ENST00000581113 M0R3E3 92 aa1.99□□□□□ -2.09
NF1-220ENST00000581113 C20orf197Q8N268 126 aa1.99□□□□□ -2.09
NF1-220ENST00000581113 IGKV2-40A0A087WW87 121 aaPredicted RBP1.98□□□□□ -2.09
NF1-220ENST00000581113 TRGV1A0A0A0MS02 117 aa1.98□□□□□ -2.09
NF1-220ENST00000581113 LOC101927531A0A1B0GV80 90 aa1.98□□□□□ -2.09
NF1-220ENST00000581113 F8WEM9 126 aa1.98□□□□□ -2.09
NF1-220ENST00000581113 SPINK4O60575 86 aa1.98□□□□□ -2.09
NF1-220ENST00000581113 IGKV2D-40P01614 121 aaPredicted RBP1.98□□□□□ -2.09
NF1-220ENST00000581113 NMES1Q9C002 83 aa1.98□□□□□ -2.09
NF1-220ENST00000581113 A0A096LPF7 62 aa1.97□□□□□ -2.09
NF1-220ENST00000581113 KLKP1Q107X0 134 aa1.97□□□□□ -2.09
NF1-220ENST00000581113 CDC42SE2Q9NRR3 84 aa1.97□□□□□ -2.09
NF1-220ENST00000581113 HSPG2P98160 4391 aa1.97□□□□□ -2.09
NF1-220ENST00000581113 APOBP04114 4563 aaKnown RBP1.97□□□□□ -2.09
NF1-220ENST00000581113 TRBV25-1A0A075B6N4 114 aa1.96□□□□□ -2.1
NF1-220ENST00000581113 TRBV6-4A0A1B0GX49 114 aa1.96□□□□□ -2.1
NF1-220ENST00000581113 C7orf77A4D0Y5 90 aa1.96□□□□□ -2.1
NF1-220ENST00000581113 PPP1R17O96001 155 aa1.96□□□□□ -2.1
NF1-220ENST00000581113 DNAL4O96015 105 aa1.96□□□□□ -2.1
NF1-220ENST00000581113 SMIM13P0DJ93 91 aa1.96□□□□□ -2.1
NF1-220ENST00000581113 Q6ZRN7 208 aaPredicted RBP1.96□□□□□ -2.1
NF1-220ENST00000581113 PPP1R1CQ8WVI7 109 aa1.96□□□□□ -2.1
NF1-220ENST00000581113 PRO0255Q9UI72 69 aa1.96□□□□□ -2.1
NF1-220ENST00000581113 TRGV4A0A0C4DH28 118 aa1.95□□□□□ -2.1
NF1-220ENST00000581113 UMAD1C9J7I0 102 aa1.95□□□□□ -2.1
NF1-220ENST00000581113 JMJD7-PLA2G4BH0Y9G9 81 aa1.95□□□□□ -2.1
NF1-220ENST00000581113 COX6CP09669 75 aa1.95□□□□□ -2.1
NF1-220ENST00000581113 SFTA3P0C7M3 94 aa1.95□□□□□ -2.1
NF1-220ENST00000581113 LINC00643Q86TS7 51 aa1.95□□□□□ -2.1
NF1-220ENST00000581113 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
NF1-220ENST00000581113 ARL2-SNX15V9GYD0 113 aa1.95□□□□□ -2.1
NF1-220ENST00000581113 TRAV21A0A0B4J279 112 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 ZNF815PA8K554 130 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
NF1-220ENST00000581113 TMEM170BQ5T4T1 132 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 WFDC10BQ8IUB3 73 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 A0A087WTM6 91 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 IGKV3D-7A0A0C4DH55 119 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 IGKV3OR2-268A0A0C4DH90 116 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 ARL14EPLP0DKL9 152 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 GCHFRP30047 84 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 SPAG11BQ08648 103 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 SPAG11AQ6PDA7 123 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 LINC01600Q96MT4 127 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 TMEM167BQ9NRX6 74 aa1.94□□□□□ -2.1
NF1-220ENST00000581113 HERC1Q15751 4861 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 IGHV3-30P01768 117 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 ACYP1P07311 99 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 IGHV3-30-5P0DP03 117 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 PDE6GP18545 87 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 SERF2P84101 59 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 LINC01556Q5JQF7 62 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 LELP1Q5T871 98 aa1.93□□□□□ -2.1
NF1-220ENST00000581113 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
NF1-220ENST00000581113 FAT1Q14517 4588 aa1.92□□□□□ -2.1
NF1-220ENST00000581113 FXYD6-FXYD2A0A087WZ82 144 aa1.92□□□□□ -2.1
NF1-220ENST00000581113 HIGD1CA8MV81 97 aa1.92□□□□□ -2.1
NF1-220ENST00000581113 BCE1O60756 84 aa1.92□□□□□ -2.1
NF1-220ENST00000581113 ELOF1P60002 83 aaKnown RBP1.92□□□□□ -2.1
NF1-220ENST00000581113 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
NF1-220ENST00000581113 Q5VSD8 79 aa1.92□□□□□ -2.1
NF1-220ENST00000581113 COX7B2Q8TF08 81 aa1.92□□□□□ -2.1
NF1-220ENST00000581113 PRR15LQ9BU68 103 aa1.92□□□□□ -2.1
NF1-220ENST00000581113 CTXND1A0A1B0GTU2 59 aa1.91□□□□□ -2.1
NF1-220ENST00000581113 H3BVH4 76 aa1.91□□□□□ -2.1
NF1-220ENST00000581113 RPL37AP61513 92 aaKnown RBP1.91□□□□□ -2.1
NF1-220ENST00000581113 Q86TA4 180 aa1.91□□□□□ -2.1
NF1-220ENST00000581113 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
NF1-220ENST00000581113 A0A087WWC5 75 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 TRBV6-1A0A0K0K1D8 114 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 MYMXA0A1B0GTQ4 84 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
NF1-220ENST00000581113 LEPROTL1O95214 131 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 SMR3BP02814 79 aaPredicted RBP1.9□□□□□ -2.11
NF1-220ENST00000581113 ARMS2P0C7Q2 107 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 CRIP1P50238 77 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 HAMPP81172 84 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 MYCBP2O75592 4640 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 DNAH8Q96JB1 4490 aa1.9□□□□□ -2.11
NF1-220ENST00000581113 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
NF1-220ENST00000581113 FAM74A4Q5TZK3 123 aa1.89□□□□□ -2.11
NF1-220ENST00000581113 DMBT1Q9UGM3 2413 aaPredicted RBP1.89□□□□□ -2.11
NF1-220ENST00000581113 A0A087WVE0 104 aa1.88□□□□□ -2.11
NF1-220ENST00000581113 Q6ZSA8 131 aa1.88□□□□□ -2.11
NF1-220ENST00000581113 BAGE2Q86Y30 109 aa1.88□□□□□ -2.11
NF1-220ENST00000581113 FLG2Q5D862 2391 aaPredicted RBP1.88□□□□□ -2.11
NF1-220ENST00000581113 TRBV6-5A0A0K0K1A5 114 aa1.88□□□□□ -2.11
NF1-220ENST00000581113 F8VRH5 84 aa1.88□□□□□ -2.11
NF1-220ENST00000581113 ENHOQ6UWT2 76 aa1.88□□□□□ -2.11
NF1-220ENST00000581113 COA5Q86WW8 74 aa1.88□□□□□ -2.11
NF1-220ENST00000581113 DEFB104AQ8WTQ1 72 aa1.88□□□□□ -2.11
NF1-220ENST00000581113 LINC00208Q96KT6 92 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms