RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 LYNX1G3V0Z9 82 aa-0.8□□□□□ -2.54
TOP2A-202ENST00000577541 MT1GP13640 62 aa-0.8□□□□□ -2.54
TOP2A-202ENST00000577541 HMGA1P17096 107 aaKnown RBP-0.8□□□□□ -2.54
TOP2A-202ENST00000577541 CEP295Q9C0D2 2601 aa-0.8□□□□□ -2.54
TOP2A-202ENST00000577541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.8□□□□□ -2.54
TOP2A-202ENST00000577541 CFAP46Q8IYW2 2715 aa-0.8□□□□□ -2.54
TOP2A-202ENST00000577541 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.81□□□□□ -2.54
TOP2A-202ENST00000577541 NDUFB1O75438 58 aa-0.81□□□□□ -2.54
TOP2A-202ENST00000577541 DEFB110Q30KQ9 67 aa-0.81□□□□□ -2.54
TOP2A-202ENST00000577541 DEFB106AQ8N104 65 aa-0.81□□□□□ -2.54
TOP2A-202ENST00000577541 RELNP78509 3460 aa-0.81□□□□□ -2.54
TOP2A-202ENST00000577541 DDX60LQ5H9U9 1706 aaKnown RBP-0.81□□□□□ -2.54
TOP2A-202ENST00000577541 MT1MQ8N339 61 aa-0.82□□□□□ -2.54
TOP2A-202ENST00000577541 FAM186AA6NE01 2351 aa-0.82□□□□□ -2.54
TOP2A-202ENST00000577541 MYO9AB2RTY4 2548 aa-0.82□□□□□ -2.54
TOP2A-202ENST00000577541 DNAH7Q8WXX0 4024 aa-0.83□□□□□ -2.54
TOP2A-202ENST00000577541 CFAP43Q8NDM7 1665 aa-0.83□□□□□ -2.54
TOP2A-202ENST00000577541 MED14O60244 1454 aa-0.83□□□□□ -2.54
TOP2A-202ENST00000577541 MT2AP02795 61 aa-0.83□□□□□ -2.54
TOP2A-202ENST00000577541 SMIM13P0DJ93 91 aa-0.83□□□□□ -2.54
TOP2A-202ENST00000577541 IFI27P40305 119 aaPredicted RBP-0.83□□□□□ -2.54
TOP2A-202ENST00000577541 KRTAP19-5Q3LI72 72 aa-0.83□□□□□ -2.54
TOP2A-202ENST00000577541 UACAQ9BZF9 1416 aa-0.83□□□□□ -2.54
TOP2A-202ENST00000577541 C5orf42Q9H799 3197 aa-0.84□□□□□ -2.54
TOP2A-202ENST00000577541 H3BUT2 72 aa-0.84□□□□□ -2.54
TOP2A-202ENST00000577541 DEFB121Q5J5C9 76 aa-0.84□□□□□ -2.54
TOP2A-202ENST00000577541 TJP1Q07157 1748 aa-0.84□□□□□ -2.54
TOP2A-202ENST00000577541 CCDC88BA6NC98 1476 aa-0.85□□□□□ -2.55
TOP2A-202ENST00000577541 CD163L1Q9NR16 1453 aa-0.85□□□□□ -2.55
TOP2A-202ENST00000577541 FRYQ5TBA9 3013 aa-0.85□□□□□ -2.55
TOP2A-202ENST00000577541 RNF17Q9BXT8 1623 aaKnown RBP-0.85□□□□□ -2.55
TOP2A-202ENST00000577541 TLN1Q9Y490 2541 aaKnown RBP-0.85□□□□□ -2.55
TOP2A-202ENST00000577541 ITSN1Q15811 1721 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 SMR3BP02814 79 aaPredicted RBP-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 CRIP1P50238 77 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 GNG2P59768 71 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 ST20Q9HBF5 79 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 ZC3H13Q5T200 1668 aaKnown RBP-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 ITSN2Q9NZM3 1697 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 DNAH17Q9UFH2 4485 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 KDM5DQ9BY66 1539 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 DCAF1Q9Y4B6 1507 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 ERVK-7P63135 1459 aa-0.86□□□□□ -2.55
TOP2A-202ENST00000577541 SPTBN5Q9NRC6 3674 aaKnown RBP-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 ANKRD36CQ5JPF3 1778 aa-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 KANTRA0A1W2PQU2 76 aa-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 MT1EP04732 61 aa-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 BVES-AS1Q5T3Y7 98 aa-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 ATP5EP2Q5VTU8 51 aa-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 MT1LQ93083 61 aa-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 ARHGAP35Q9NRY4 1499 aa-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 SMG1Q96Q15 3661 aaKnown RBP-0.87□□□□□ -2.55
TOP2A-202ENST00000577541 DMXL2Q8TDJ6 3036 aa-0.88□□□□□ -2.55
TOP2A-202ENST00000577541 LRBAP50851 2863 aa-0.88□□□□□ -2.55
TOP2A-202ENST00000577541 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.88□□□□□ -2.55
TOP2A-202ENST00000577541 A0A087WXM4 84 aa-0.88□□□□□ -2.55
TOP2A-202ENST00000577541 DEFB131BA0A096LNP1 70 aa-0.88□□□□□ -2.55
TOP2A-202ENST00000577541 SMARCA2P51531 1590 aa-0.88□□□□□ -2.55
TOP2A-202ENST00000577541 NCBP2-AS2Q69YL0 99 aa-0.89□□□□□ -2.55
TOP2A-202ENST00000577541 CLPSL2Q6UWE3 100 aa-0.89□□□□□ -2.55
TOP2A-202ENST00000577541 KCNQ1DNQ9H478 68 aa-0.89□□□□□ -2.55
TOP2A-202ENST00000577541 ATMQ13315 3056 aa-0.89□□□□□ -2.55
TOP2A-202ENST00000577541 TLN2Q9Y4G6 2542 aa-0.89□□□□□ -2.55
TOP2A-202ENST00000577541 PARP4Q9UKK3 1724 aaKnown RBP-0.89□□□□□ -2.55
TOP2A-202ENST00000577541 ADGRG4Q8IZF6 3080 aa-0.9□□□□□ -2.55
TOP2A-202ENST00000577541 CSMD1Q96PZ7 3565 aa-0.9□□□□□ -2.55
TOP2A-202ENST00000577541 RPS27P42677 84 aaKnown RBP-0.9□□□□□ -2.55
TOP2A-202ENST00000577541 ADIRFQ15847 76 aa-0.9□□□□□ -2.55
TOP2A-202ENST00000577541 RPS27LQ71UM5 84 aaKnown RBP-0.9□□□□□ -2.55
TOP2A-202ENST00000577541 KRTAP8-1Q8IUC2 63 aa-0.9□□□□□ -2.55
TOP2A-202ENST00000577541 BOD1L1Q8NFC6 3051 aa-0.9□□□□□ -2.55
TOP2A-202ENST00000577541 CDC42BPGQ6DT37 1551 aa-0.91□□□□□ -2.55
TOP2A-202ENST00000577541 RB1CC1Q8TDY2 1594 aa-0.91□□□□□ -2.55
TOP2A-202ENST00000577541 CFAP74Q9C0B2 1584 aa-0.91□□□□□ -2.55
TOP2A-202ENST00000577541 DNAH10Q8IVF4 4471 aa-0.91□□□□□ -2.55
TOP2A-202ENST00000577541 DEFB4AO15263 64 aa-0.91□□□□□ -2.56
TOP2A-202ENST00000577541 KIAA0586Q9BVV6 1533 aa-0.91□□□□□ -2.56
TOP2A-202ENST00000577541 NRAPQ86VF7 1730 aa-0.92□□□□□ -2.56
TOP2A-202ENST00000577541 SPENQ96T58 3664 aaKnown RBP-0.92□□□□□ -2.56
TOP2A-202ENST00000577541 LMTK2Q8IWU2 1503 aa-0.92□□□□□ -2.56
TOP2A-202ENST00000577541 ENHOQ6UWT2 76 aa-0.92□□□□□ -2.56
TOP2A-202ENST00000577541 ZFHX4Q86UP3 3567 aa-0.92□□□□□ -2.56
TOP2A-202ENST00000577541 SPTAN1Q13813 2472 aaKnown RBP-0.92□□□□□ -2.56
TOP2A-202ENST00000577541 TOGARAM1Q9Y4F4 1720 aa-0.92□□□□□ -2.56
TOP2A-202ENST00000577541 KIF1AQ12756 1690 aa-0.93□□□□□ -2.56
TOP2A-202ENST00000577541 HFM1A2PYH4 1435 aa-0.93□□□□□ -2.56
TOP2A-202ENST00000577541 ABCC1P33527 1531 aa-0.94□□□□□ -2.56
TOP2A-202ENST00000577541 DIP2AQ14689 1571 aa-0.94□□□□□ -2.56
TOP2A-202ENST00000577541 INO80Q9ULG1 1556 aaPredicted RBP-0.94□□□□□ -2.56
TOP2A-202ENST00000577541 WT1-ASQ06250 92 aa-0.94□□□□□ -2.56
TOP2A-202ENST00000577541 C18orf32Q8TCD1 76 aa-0.94□□□□□ -2.56
TOP2A-202ENST00000577541 S100A13Q99584 98 aa-0.94□□□□□ -2.56
TOP2A-202ENST00000577541 RALGAPBQ86X10 1494 aa-0.94□□□□□ -2.56
TOP2A-202ENST00000577541 ASXL1Q8IXJ9 1541 aa-0.94□□□□□ -2.56
TOP2A-202ENST00000577541 ABCA8O94911 1581 aa-0.95□□□□□ -2.56
TOP2A-202ENST00000577541 MT1FP04733 61 aa-0.95□□□□□ -2.56
TOP2A-202ENST00000577541 UBL5Q9BZL1 73 aa-0.95□□□□□ -2.56
TOP2A-202ENST00000577541 CCDC18Q5T9S5 1454 aa-0.95□□□□□ -2.56
TOP2A-202ENST00000577541 NHSQ6T4R5 1651 aa-0.95□□□□□ -2.56
TOP2A-202ENST00000577541 DNAH5Q8TE73 4624 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms