RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 DIP2BQ9P265 1576 aa-1.38□□□□□ -2.63
CDH8-204ENST00000577536 ZC3H13Q5T200 1668 aaKnown RBP-1.38□□□□□ -2.63
CDH8-204ENST00000577536 CORTO00230 105 aa-1.38□□□□□ -2.63
CDH8-204ENST00000577536 SMIM11AP58511 58 aa-1.38□□□□□ -2.63
CDH8-204ENST00000577536 DEFB136Q30KP8 78 aa-1.38□□□□□ -2.63
CDH8-204ENST00000577536 COL5A1-AS1Q5SY13 56 aa-1.38□□□□□ -2.63
CDH8-204ENST00000577536 ACBD7Q8N6N7 88 aa-1.38□□□□□ -2.63
CDH8-204ENST00000577536 ROCK2O75116 1388 aaKnown RBP-1.38□□□□□ -2.63
CDH8-204ENST00000577536 ATP10BO94823 1461 aa-1.38□□□□□ -2.63
CDH8-204ENST00000577536 PZPP20742 1482 aa-1.38□□□□□ -2.63
CDH8-204ENST00000577536 EPRSP07814 1512 aaKnown RBP-1.39□□□□□ -2.63
CDH8-204ENST00000577536 ITSN1Q15811 1721 aa-1.39□□□□□ -2.63
CDH8-204ENST00000577536 NDUFA4O00483 81 aa-1.39□□□□□ -2.63
CDH8-204ENST00000577536 HMGA1P17096 107 aaKnown RBP-1.39□□□□□ -2.63
CDH8-204ENST00000577536 MINOS1Q5TGZ0 78 aa-1.39□□□□□ -2.63
CDH8-204ENST00000577536 CLTCQ00610 1675 aaKnown RBP-1.39□□□□□ -2.63
CDH8-204ENST00000577536 UMAD1C9J7I0 102 aa-1.4□□□□□ -2.63
CDH8-204ENST00000577536 FAUP35544 74 aaKnown RBP-1.4□□□□□ -2.63
CDH8-204ENST00000577536 MRPS10P82664 201 aaKnown RBP-1.4□□□□□ -2.63
CDH8-204ENST00000577536 GTF2H5Q6ZYL4 71 aa-1.4□□□□□ -2.63
CDH8-204ENST00000577536 TSC22D3Q99576 134 aa-1.4□□□□□ -2.63
CDH8-204ENST00000577536 C20orf78Q9BR46 151 aa-1.4□□□□□ -2.63
CDH8-204ENST00000577536 CCDC88BA6NC98 1476 aa-1.4□□□□□ -2.63
CDH8-204ENST00000577536 A0A1B0GUL6 1792 aa-1.4□□□□□ -2.63
CDH8-204ENST00000577536 WDFY3Q8IZQ1 3526 aa-1.4□□□□□ -2.63
CDH8-204ENST00000577536 NALCNQ8IZF0 1738 aa-1.4□□□□□ -2.63
CDH8-204ENST00000577536 CEP350Q5VT06 3117 aa-1.41□□□□□ -2.63
CDH8-204ENST00000577536 CENPEQ02224 2701 aa-1.41□□□□□ -2.63
CDH8-204ENST00000577536 FANCAO15360 1455 aa-1.41□□□□□ -2.63
CDH8-204ENST00000577536 NCOA2Q15596 1464 aa-1.41□□□□□ -2.63
CDH8-204ENST00000577536 LOC105371267A0A1B0GV96 52 aa-1.41□□□□□ -2.64
CDH8-204ENST00000577536 LINC00032P0C843 101 aa-1.41□□□□□ -2.64
CDH8-204ENST00000577536 S100A1P23297 94 aa-1.41□□□□□ -2.64
CDH8-204ENST00000577536 CRIP1P50238 77 aa-1.41□□□□□ -2.64
CDH8-204ENST00000577536 PEA15Q15121 130 aa-1.41□□□□□ -2.64
CDH8-204ENST00000577536 LRRIQ1Q96JM4 1722 aa-1.41□□□□□ -2.64
CDH8-204ENST00000577536 PLCH1Q4KWH8 1693 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 FRYLO94915 3013 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 MYMXA0A1B0GTQ4 84 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 LEAP2Q969E1 77 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 DPY30Q9C005 99 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 NEXMIFQ5QGS0 1516 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 ARFGEF2Q9Y6D5 1785 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 DMDP11532 3685 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 DNMBPQ6XZF7 1577 aa-1.42□□□□□ -2.64
CDH8-204ENST00000577536 CD163L1Q9NR16 1453 aa-1.43□□□□□ -2.64
CDH8-204ENST00000577536 PCNTO95613 3336 aa-1.43□□□□□ -2.64
CDH8-204ENST00000577536 VPS13CQ709C8 3753 aa-1.43□□□□□ -2.64
CDH8-204ENST00000577536 URB2Q14146 1524 aaKnown RBP-1.43□□□□□ -2.64
CDH8-204ENST00000577536 TMEM203Q969S6 136 aa-1.43□□□□□ -2.64
CDH8-204ENST00000577536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.44□□□□□ -2.64
CDH8-204ENST00000577536 CEBPZOSA8MTT3 80 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 DLEU1O43261 78 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 SFTA3P0C7M3 94 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 FCER1GP30273 86 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 UBL5Q9BZL1 73 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 KCNQ1DNQ9H478 68 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 C6orf48Q9UBA6 75 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 RABAC1Q9UI14 185 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 MED14O60244 1454 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 ERVK-7P63135 1459 aa-1.44□□□□□ -2.64
CDH8-204ENST00000577536 TJP1Q07157 1748 aa-1.45□□□□□ -2.64
CDH8-204ENST00000577536 UBR1Q8IWV7 1749 aa-1.45□□□□□ -2.64
CDH8-204ENST00000577536 NCBP2-AS2Q69YL0 99 aa-1.45□□□□□ -2.64
CDH8-204ENST00000577536 GNG8Q9UK08 70 aa-1.45□□□□□ -2.64
CDH8-204ENST00000577536 NRAPQ86VF7 1730 aa-1.46□□□□□ -2.64
CDH8-204ENST00000577536 INO80Q9ULG1 1556 aaPredicted RBP-1.46□□□□□ -2.64
CDH8-204ENST00000577536 A0A1B0GV90 55 aa-1.46□□□□□ -2.64
CDH8-204ENST00000577536 NREPQ16612 68 aa-1.46□□□□□ -2.64
CDH8-204ENST00000577536 ARHGAP35Q9NRY4 1499 aa-1.46□□□□□ -2.64
CDH8-204ENST00000577536 PPLO60437 1756 aa-1.47□□□□□ -2.64
CDH8-204ENST00000577536 HFM1A2PYH4 1435 aa-1.47□□□□□ -2.64
CDH8-204ENST00000577536 ZFYVE16Q7Z3T8 1539 aa-1.47□□□□□ -2.64
CDH8-204ENST00000577536 MYO3AQ8NEV4 1616 aa-1.48□□□□□ -2.65
CDH8-204ENST00000577536 RNF17Q9BXT8 1623 aaKnown RBP-1.48□□□□□ -2.65
CDH8-204ENST00000577536 C20orf202A1L168 122 aa-1.48□□□□□ -2.65
CDH8-204ENST00000577536 GYPAP02724 150 aa-1.48□□□□□ -2.65
CDH8-204ENST00000577536 RBP2P50120 134 aa-1.48□□□□□ -2.65
CDH8-204ENST00000577536 LINC00643Q86TS7 51 aa-1.48□□□□□ -2.65
CDH8-204ENST00000577536 SZT2Q5T011 3432 aa-1.49□□□□□ -2.65
CDH8-204ENST00000577536 RALGAPBQ86X10 1494 aa-1.49□□□□□ -2.65
CDH8-204ENST00000577536 ETDCA0A1B0GVM5 59 aa-1.49□□□□□ -2.65
CDH8-204ENST00000577536 S100A10P60903 97 aa-1.49□□□□□ -2.65
CDH8-204ENST00000577536 SNRPFP62306 86 aaKnown RBP-1.49□□□□□ -2.65
CDH8-204ENST00000577536 S100A12P80511 92 aa-1.49□□□□□ -2.65
CDH8-204ENST00000577536 FAM107BQ9H098 131 aa-1.49□□□□□ -2.65
CDH8-204ENST00000577536 MAP3K4Q9Y6R4 1608 aa-1.49□□□□□ -2.65
CDH8-204ENST00000577536 CROCC2H7BZ55 1655 aa-1.49□□□□□ -2.65
CDH8-204ENST00000577536 PIK3C2BO00750 1634 aa-1.5□□□□□ -2.65
CDH8-204ENST00000577536 KIF21BO75037 1637 aa-1.5□□□□□ -2.65
CDH8-204ENST00000577536 PVALEFA0A1B0GWK0 134 aa-1.5□□□□□ -2.65
CDH8-204ENST00000577536 HMGN1P05114 100 aa-1.5□□□□□ -2.65
CDH8-204ENST00000577536 RICTORQ6R327 1708 aa-1.5□□□□□ -2.65
CDH8-204ENST00000577536 S100A8P05109 93 aa-1.51□□□□□ -2.65
CDH8-204ENST00000577536 PREX2Q70Z35 1606 aa-1.51□□□□□ -2.65
CDH8-204ENST00000577536 EP400Q96L91 3159 aa-1.52□□□□□ -2.65
CDH8-204ENST00000577536 EFCAB10A6NFE3 127 aa-1.52□□□□□ -2.65
CDH8-204ENST00000577536 NCMAPQ5T1S8 102 aa-1.52□□□□□ -2.65
CDH8-204ENST00000577536 ATP5EP2Q5VTU8 51 aa-1.52□□□□□ -2.65
CDH8-204ENST00000577536 C2orf88Q9BSF0 95 aa-1.52□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms