RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 APLNQ9ULZ1 77 aa2.19□□□□□ -2.06
SMG6-208ENST00000570874 DYNC2H1Q8NCM8 4307 aaKnown RBP2.18□□□□□ -2.06
SMG6-208ENST00000570874 NOTCH1P46531 2555 aa2.18□□□□□ -2.06
SMG6-208ENST00000570874 A0A087WVE0 104 aa2.18□□□□□ -2.06
SMG6-208ENST00000570874 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
SMG6-208ENST00000570874 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
SMG6-208ENST00000570874 LINC01556Q5JQF7 62 aa2.18□□□□□ -2.06
SMG6-208ENST00000570874 UNQ6190/PRO20217Q6UXQ8 127 aa2.18□□□□□ -2.06
SMG6-208ENST00000570874 ST20-AS1Q8NBB2 130 aa2.18□□□□□ -2.06
SMG6-208ENST00000570874 Q9BRP9 147 aa2.18□□□□□ -2.06
SMG6-208ENST00000570874 LINC00846Q9NV44 126 aa2.18□□□□□ -2.06
SMG6-208ENST00000570874 DNAH10Q8IVF4 4471 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 IGKV2D-24A0A075B6R9 120 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 A0A087WYN8 130 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 IGKV3D-7A0A0C4DH55 119 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 FAM168BA1KXE4 195 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 NUPR2A6NF83 97 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 NDUFB1O75438 58 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 KRTAP10-7P60409 375 aaPredicted RBP2.17□□□□□ -2.06
SMG6-208ENST00000570874 LINC00575Q6W349 94 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 C6orf48Q9UBA6 75 aa2.17□□□□□ -2.06
SMG6-208ENST00000570874 STARD9Q9P2P6 4700 aa2.16□□□□□ -2.06
SMG6-208ENST00000570874 SLPIP03973 132 aa2.16□□□□□ -2.06
SMG6-208ENST00000570874 CNBPP62633 177 aaKnown RBP2.16□□□□□ -2.06
SMG6-208ENST00000570874 KRTAP25-1Q3LHN0 102 aa2.16□□□□□ -2.06
SMG6-208ENST00000570874 TYMSOSQ8TAI1 123 aa2.16□□□□□ -2.06
SMG6-208ENST00000570874 LINC01558Q9Y6Z2 57 aa2.16□□□□□ -2.06
SMG6-208ENST00000570874 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
SMG6-208ENST00000570874 DNAH7Q8WXX0 4024 aa2.15□□□□□ -2.06
SMG6-208ENST00000570874 M0R2N4 97 aa2.15□□□□□ -2.07
SMG6-208ENST00000570874 NCR3O14931 201 aa2.15□□□□□ -2.07
SMG6-208ENST00000570874 IGLV6-57P01721 117 aa2.15□□□□□ -2.07
SMG6-208ENST00000570874 UBE2DNLQ8IWF7 75 aa2.15□□□□□ -2.07
SMG6-208ENST00000570874 C9orf163Q8N9P6 203 aa2.15□□□□□ -2.07
SMG6-208ENST00000570874 HIGD2AQ9BW72 106 aa2.15□□□□□ -2.07
SMG6-208ENST00000570874 LYSTQ99698 3801 aa2.15□□□□□ -2.07
SMG6-208ENST00000570874 PLECQ15149 4684 aaKnown RBP2.15□□□□□ -2.07
SMG6-208ENST00000570874 DNAH6Q9C0G6 4158 aa2.14□□□□□ -2.07
SMG6-208ENST00000570874 COX7BP24311 80 aa2.14□□□□□ -2.07
SMG6-208ENST00000570874 NREPQ16612 68 aa2.14□□□□□ -2.07
SMG6-208ENST00000570874 CSMD3Q7Z407 3707 aa2.14□□□□□ -2.07
SMG6-208ENST00000570874 MGAM2Q2M2H8 2515 aa2.13□□□□□ -2.07
SMG6-208ENST00000570874 KRTAP7-1Q8IUC3 87 aa2.13□□□□□ -2.07
SMG6-208ENST00000570874 NBEAL1Q6ZS30 2694 aa2.13□□□□□ -2.07
SMG6-208ENST00000570874 DNAH17Q9UFH2 4485 aa2.12□□□□□ -2.07
SMG6-208ENST00000570874 NBDYA0A0U1RRE5 68 aa2.12□□□□□ -2.07
SMG6-208ENST00000570874 LRCOL1A6NCL2 159 aa2.12□□□□□ -2.07
SMG6-208ENST00000570874 UQCR11O14957 56 aa2.12□□□□□ -2.07
SMG6-208ENST00000570874 KRTAP5-9P26371 169 aa2.12□□□□□ -2.07
SMG6-208ENST00000570874 HAMPP81172 84 aa2.12□□□□□ -2.07
SMG6-208ENST00000570874 Q6ZRN7 208 aaPredicted RBP2.12□□□□□ -2.07
SMG6-208ENST00000570874 PLAC8Q9NZF1 115 aa2.12□□□□□ -2.07
SMG6-208ENST00000570874 PSORS1C2Q9UIG4 136 aa2.12□□□□□ -2.07
SMG6-208ENST00000570874 ALMS1Q8TCU4 4167 aa2.11□□□□□ -2.07
SMG6-208ENST00000570874 KMT2AQ03164 3969 aa2.11□□□□□ -2.07
SMG6-208ENST00000570874 A0A096LNI7 61 aa2.11□□□□□ -2.07
SMG6-208ENST00000570874 Q6ZQY7 126 aa2.11□□□□□ -2.07
SMG6-208ENST00000570874 LINC00208Q96KT6 92 aa2.11□□□□□ -2.07
SMG6-208ENST00000570874 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
SMG6-208ENST00000570874 IGLV5-48A0A075B6I7 105 aa2.1□□□□□ -2.07
SMG6-208ENST00000570874 LCE6AA0A183 80 aa2.1□□□□□ -2.07
SMG6-208ENST00000570874 LY6G6CO95867 125 aa2.1□□□□□ -2.07
SMG6-208ENST00000570874 SPINT4Q6UDR6 99 aa2.1□□□□□ -2.07
SMG6-208ENST00000570874 KRTAP11-1Q8IUC1 163 aa2.1□□□□□ -2.07
SMG6-208ENST00000570874 KCNQ1DNQ9H478 68 aa2.1□□□□□ -2.07
SMG6-208ENST00000570874 DNAH2Q9P225 4427 aa2.1□□□□□ -2.07
SMG6-208ENST00000570874 FRAS1Q86XX4 4008 aa2.09□□□□□ -2.07
SMG6-208ENST00000570874 IGKV2-24A0A0C4DH68 120 aa2.09□□□□□ -2.07
SMG6-208ENST00000570874 A0A1W2PNN7 141 aa2.09□□□□□ -2.07
SMG6-208ENST00000570874 H0Y9P7 68 aa2.09□□□□□ -2.07
SMG6-208ENST00000570874 ZNF861PO60384 105 aa2.09□□□□□ -2.07
SMG6-208ENST00000570874 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
SMG6-208ENST00000570874 SPRR4Q96PI1 79 aa2.09□□□□□ -2.07
SMG6-208ENST00000570874 PRO2289Q9P1D8 64 aa2.09□□□□□ -2.07
SMG6-208ENST00000570874 A0A087WTM6 91 aa2.08□□□□□ -2.08
SMG6-208ENST00000570874 KRTAP29-1A8MX34 341 aaPredicted RBP2.08□□□□□ -2.08
SMG6-208ENST00000570874 KRTAP15-1Q3LI76 137 aa2.08□□□□□ -2.08
SMG6-208ENST00000570874 SPATA8Q6RVD6 105 aa2.08□□□□□ -2.08
SMG6-208ENST00000570874 STAB2Q8WWQ8 2551 aa2.08□□□□□ -2.08
SMG6-208ENST00000570874 TENM2Q9NT68 2774 aa2.07□□□□□ -2.08
SMG6-208ENST00000570874 ZCCHC13Q8WW36 166 aaKnown RBP2.07□□□□□ -2.08
SMG6-208ENST00000570874 R4GN34 69 aa2.07□□□□□ -2.08
SMG6-208ENST00000570874 DNAH8Q96JB1 4490 aa2.07□□□□□ -2.08
SMG6-208ENST00000570874 ETDCA0A1B0GVM5 59 aa2.06□□□□□ -2.08
SMG6-208ENST00000570874 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
SMG6-208ENST00000570874 SPRR1AP35321 89 aa2.06□□□□□ -2.08
SMG6-208ENST00000570874 SPINK7P58062 85 aa2.06□□□□□ -2.08
SMG6-208ENST00000570874 PRLHP81277 87 aa2.06□□□□□ -2.08
SMG6-208ENST00000570874 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
SMG6-208ENST00000570874 SACSQ9NZJ4 4579 aa2.06□□□□□ -2.08
SMG6-208ENST00000570874 IGKV2-30P06310 120 aa2.05□□□□□ -2.08
SMG6-208ENST00000570874 C14orf177Q52M58 125 aa2.05□□□□□ -2.08
SMG6-208ENST00000570874 Q6ZRX8 168 aa2.05□□□□□ -2.08
SMG6-208ENST00000570874 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
SMG6-208ENST00000570874 DNAH11Q96DT5 4516 aa2.05□□□□□ -2.08
SMG6-208ENST00000570874 DNAH5Q8TE73 4624 aa2.05□□□□□ -2.08
SMG6-208ENST00000570874 A0A0G2JQZ4 141 aa2.04□□□□□ -2.08
SMG6-208ENST00000570874 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
SMG6-208ENST00000570874 SPACA4Q8TDM5 124 aa2.04□□□□□ -2.08
SMG6-208ENST00000570874 TGP01266 2768 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms