RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 C2orf91Q6ZV80 131 aa6.57□□□□□ -1.36
CTDNEP1-205ENST00000570828 SS18L2Q9UHA2 77 aa6.57□□□□□ -1.36
CTDNEP1-205ENST00000570828 F8W1H4 67 aa6.56□□□□□ -1.36
CTDNEP1-205ENST00000570828 OBSCN-AS1Q96MR7 158 aa6.56□□□□□ -1.36
CTDNEP1-205ENST00000570828 FAM218AQ96MZ4 157 aa6.56□□□□□ -1.36
CTDNEP1-205ENST00000570828 SPCS1Q9Y6A9 102 aa6.56□□□□□ -1.36
CTDNEP1-205ENST00000570828 COX6B2Q6YFQ2 88 aa6.55□□□□□ -1.36
CTDNEP1-205ENST00000570828 CEND1Q8N111 149 aa6.55□□□□□ -1.36
CTDNEP1-205ENST00000570828 A0A1W2PPM0 123 aa6.54□□□□□ -1.36
CTDNEP1-205ENST00000570828 NDUFV3P56181 108 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-205ENST00000570828 Q6Q795 121 aa6.54□□□□□ -1.36
CTDNEP1-205ENST00000570828 SIGMAR1Q99720 223 aa6.54□□□□□ -1.36
CTDNEP1-205ENST00000570828 PRO1854Q9UHT4 67 aa6.54□□□□□ -1.36
CTDNEP1-205ENST00000570828 A0A1B0GX51 115 aa6.52□□□□□ -1.37
CTDNEP1-205ENST00000570828 ATP11AUNQ6ZP68 121 aa6.52□□□□□ -1.37
CTDNEP1-205ENST00000570828 TEN1Q86WV5 123 aa6.52□□□□□ -1.37
CTDNEP1-205ENST00000570828 H3BMG7 143 aa6.51□□□□□ -1.37
CTDNEP1-205ENST00000570828 FXYD2P54710 66 aa6.51□□□□□ -1.37
CTDNEP1-205ENST00000570828 A0A087WSZ3 146 aa6.5□□□□□ -1.37
CTDNEP1-205ENST00000570828 M0R2T5 61 aa6.5□□□□□ -1.37
CTDNEP1-205ENST00000570828 Q96NJ1 140 aa6.49□□□□□ -1.37
CTDNEP1-205ENST00000570828 DNAL4O96015 105 aa6.48□□□□□ -1.37
CTDNEP1-205ENST00000570828 MPLKIPQ8TAP9 179 aa6.47□□□□□ -1.37
CTDNEP1-205ENST00000570828 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
CTDNEP1-205ENST00000570828 PSMB2P49721 201 aa6.46□□□□□ -1.38
CTDNEP1-205ENST00000570828 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-205ENST00000570828 K7ERJ3 54 aa6.45□□□□□ -1.38
CTDNEP1-205ENST00000570828 ORMDL1Q9P0S3 153 aa6.45□□□□□ -1.38
CTDNEP1-205ENST00000570828 H3BQ85 93 aa6.44□□□□□ -1.38
CTDNEP1-205ENST00000570828 C20orf166-AS1Q96NR2 134 aa6.44□□□□□ -1.38
CTDNEP1-205ENST00000570828 TRBV20-1A0A075B6N2 111 aa6.43□□□□□ -1.38
CTDNEP1-205ENST00000570828 A0A1W2PNM2 257 aa6.43□□□□□ -1.38
CTDNEP1-205ENST00000570828 COX6CP09669 75 aa6.43□□□□□ -1.38
CTDNEP1-205ENST00000570828 ANKRD29Q8N6D5 301 aa6.43□□□□□ -1.38
CTDNEP1-205ENST00000570828 FLGP20930 4061 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-205ENST00000570828 A8MUU9 505 aa6.42□□□□□ -1.38
CTDNEP1-205ENST00000570828 TRBV7-4A0A0J9YYF1 115 aa6.41□□□□□ -1.38
CTDNEP1-205ENST00000570828 DSCR10P59022 87 aa6.41□□□□□ -1.38
CTDNEP1-205ENST00000570828 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.38
CTDNEP1-205ENST00000570828 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
CTDNEP1-205ENST00000570828 TRACP01848 142 aa6.38□□□□□ -1.39
CTDNEP1-205ENST00000570828 IGKV4-1P06312 121 aa6.38□□□□□ -1.39
CTDNEP1-205ENST00000570828 CCKP06307 115 aa6.37□□□□□ -1.39
CTDNEP1-205ENST00000570828 LINC00313P59037 77 aa6.36□□□□□ -1.39
CTDNEP1-205ENST00000570828 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
CTDNEP1-205ENST00000570828 DEFB116Q30KQ4 102 aa6.33□□□□□ -1.4
CTDNEP1-205ENST00000570828 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
CTDNEP1-205ENST00000570828 NAA38Q9BRA0 125 aaKnown RBP6.32□□□□□ -1.4
CTDNEP1-205ENST00000570828 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
CTDNEP1-205ENST00000570828 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
CTDNEP1-205ENST00000570828 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
CTDNEP1-205ENST00000570828 RBM3P98179 157 aaKnown RBP6.31□□□□□ -1.4
CTDNEP1-205ENST00000570828 DSCR8Q96T75 97 aa6.31□□□□□ -1.4
CTDNEP1-205ENST00000570828 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
CTDNEP1-205ENST00000570828 ATXN8Q156A1 80 aa6.29□□□□□ -1.4
CTDNEP1-205ENST00000570828 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
CTDNEP1-205ENST00000570828 ANAPC13Q9BS18 74 aa6.28□□□□□ -1.4
CTDNEP1-205ENST00000570828 FAM236DA0A1B0GTK5 79 aa6.27□□□□□ -1.41
CTDNEP1-205ENST00000570828 FAM236CP0DP71 79 aa6.27□□□□□ -1.41
CTDNEP1-205ENST00000570828 FAM240AA0A1B0GVK7 77 aa6.26□□□□□ -1.41
CTDNEP1-205ENST00000570828 A0A1B0GVX0 72 aa6.26□□□□□ -1.41
CTDNEP1-205ENST00000570828 C9JAW5 83 aa6.26□□□□□ -1.41
CTDNEP1-205ENST00000570828 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
CTDNEP1-205ENST00000570828 BAALC-AS2P0C853 105 aa6.26□□□□□ -1.41
CTDNEP1-205ENST00000570828 C4orf26Q17RF5 130 aa6.25□□□□□ -1.41
CTDNEP1-205ENST00000570828 J3KT08 172 aa6.24□□□□□ -1.41
CTDNEP1-205ENST00000570828 ACYP1P07311 99 aa6.24□□□□□ -1.41
CTDNEP1-205ENST00000570828 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
CTDNEP1-205ENST00000570828 H3BT86 120 aa6.23□□□□□ -1.41
CTDNEP1-205ENST00000570828 HRES1P13985 223 aa6.21□□□□□ -1.42
CTDNEP1-205ENST00000570828 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-205ENST00000570828 Q6ZQT0 140 aa6.21□□□□□ -1.42
CTDNEP1-205ENST00000570828 JMJD7-PLA2G4BH0Y9G9 81 aa6.2□□□□□ -1.42
CTDNEP1-205ENST00000570828 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
CTDNEP1-205ENST00000570828 NDUFB1O75438 58 aa6.19□□□□□ -1.42
CTDNEP1-205ENST00000570828 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
CTDNEP1-205ENST00000570828 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-205ENST00000570828 LOC110117498A0A087WWA1 95 aa6.17□□□□□ -1.42
CTDNEP1-205ENST00000570828 A0A1B0GW54 56 aa6.16□□□□□ -1.42
CTDNEP1-205ENST00000570828 PDE6GP18545 87 aa6.16□□□□□ -1.42
CTDNEP1-205ENST00000570828 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
CTDNEP1-205ENST00000570828 A8MWP4 228 aa6.15□□□□□ -1.42
CTDNEP1-205ENST00000570828 Q8N9P0 234 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-205ENST00000570828 C14orf132Q9NPU4 83 aa6.14□□□□□ -1.43
CTDNEP1-205ENST00000570828 SPINK7P58062 85 aa6.13□□□□□ -1.43
CTDNEP1-205ENST00000570828 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
CTDNEP1-205ENST00000570828 MT2AP02795 61 aa6.12□□□□□ -1.43
CTDNEP1-205ENST00000570828 IGKV3D-7A0A0C4DH55 119 aa6.11□□□□□ -1.43
CTDNEP1-205ENST00000570828 PRO0628Q9UI54 55 aa6.11□□□□□ -1.43
CTDNEP1-205ENST00000570828 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
CTDNEP1-205ENST00000570828 NREPQ16612 68 aa6.09□□□□□ -1.43
CTDNEP1-205ENST00000570828 USH2AO75445 5202 aa6.08□□□□□ -1.44
CTDNEP1-205ENST00000570828 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
CTDNEP1-205ENST00000570828 MT1FP04733 61 aa6.07□□□□□ -1.44
CTDNEP1-205ENST00000570828 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
CTDNEP1-205ENST00000570828 WFDC13Q8IUB5 93 aa6.07□□□□□ -1.44
CTDNEP1-205ENST00000570828 OCR1Q9BZK8 76 aa6.07□□□□□ -1.44
CTDNEP1-205ENST00000570828 UQCRQO14949 82 aa6.05□□□□□ -1.44
CTDNEP1-205ENST00000570828 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-205ENST00000570828 ATOX1O00244 68 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms