RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 Q96NJ1 140 aa7.1□□□□□ -1.27
ABCA3-203ENST00000563623 DNAH10Q8IVF4 4471 aa7.09□□□□□ -1.27
ABCA3-203ENST00000563623 RTL8CO15255 209 aa7.09□□□□□ -1.27
ABCA3-203ENST00000563623 SPACA4Q8TDM5 124 aa7.09□□□□□ -1.27
ABCA3-203ENST00000563623 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.27
ABCA3-203ENST00000563623 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
ABCA3-203ENST00000563623 NUPR2A6NF83 97 aa7.08□□□□□ -1.28
ABCA3-203ENST00000563623 HRES1P13985 223 aa7.08□□□□□ -1.28
ABCA3-203ENST00000563623 A0A087WTM6 91 aa7.07□□□□□ -1.28
ABCA3-203ENST00000563623 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
ABCA3-203ENST00000563623 CSAG1Q6PB30 78 aa7.07□□□□□ -1.28
ABCA3-203ENST00000563623 ZNF861PO60384 105 aa7.06□□□□□ -1.28
ABCA3-203ENST00000563623 IGLV5-52A0A0A0MRZ9 124 aa7.05□□□□□ -1.28
ABCA3-203ENST00000563623 Q6ZRN7 208 aaPredicted RBP7.03□□□□□ -1.28
ABCA3-203ENST00000563623 Q6ZR54 194 aa7.03□□□□□ -1.28
ABCA3-203ENST00000563623 HUWE1Q7Z6Z7 4374 aaKnown RBP7.02□□□□□ -1.29
ABCA3-203ENST00000563623 Q5W150 140 aa7.02□□□□□ -1.29
ABCA3-203ENST00000563623 C1orf134Q5TEV5 83 aa7.01□□□□□ -1.29
ABCA3-203ENST00000563623 LINC00483Q53H64 154 aa7□□□□□ -1.29
ABCA3-203ENST00000563623 A0A1B0GU69 56 aa6.98□□□□□ -1.29
ABCA3-203ENST00000563623 ACYP2P14621 99 aa6.97□□□□□ -1.29
ABCA3-203ENST00000563623 ASB16-AS1Q495Z4 193 aa6.97□□□□□ -1.29
ABCA3-203ENST00000563623 PLA2G1BP04054 148 aaKnown RBP6.97□□□□□ -1.29
ABCA3-203ENST00000563623 LYSTQ99698 3801 aa6.97□□□□□ -1.29
ABCA3-203ENST00000563623 LY6G6CO95867 125 aa6.96□□□□□ -1.29
ABCA3-203ENST00000563623 IGLV7-43P04211 117 aa6.96□□□□□ -1.3
ABCA3-203ENST00000563623 IGKV2D-30A0A075B6S6 120 aa6.94□□□□□ -1.3
ABCA3-203ENST00000563623 IGKV2-30P06310 120 aa6.94□□□□□ -1.3
ABCA3-203ENST00000563623 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
ABCA3-203ENST00000563623 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
ABCA3-203ENST00000563623 DNAH9Q9NYC9 4486 aa6.92□□□□□ -1.3
ABCA3-203ENST00000563623 CMYA5Q8N3K9 4069 aa6.91□□□□□ -1.3
ABCA3-203ENST00000563623 DNAH1Q9P2D7 4330 aa6.9□□□□□ -1.3
ABCA3-203ENST00000563623 FBN3Q75N90 2809 aa6.89□□□□□ -1.31
ABCA3-203ENST00000563623 SPINK1P00995 79 aa6.88□□□□□ -1.31
ABCA3-203ENST00000563623 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
ABCA3-203ENST00000563623 SSBP3-AS1Q7Z2R9 100 aa6.88□□□□□ -1.31
ABCA3-203ENST00000563623 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
ABCA3-203ENST00000563623 UQCR11O14957 56 aa6.86□□□□□ -1.31
ABCA3-203ENST00000563623 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
ABCA3-203ENST00000563623 DNAH3Q8TD57 4116 aa6.83□□□□□ -1.32
ABCA3-203ENST00000563623 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
ABCA3-203ENST00000563623 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
ABCA3-203ENST00000563623 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
ABCA3-203ENST00000563623 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
ABCA3-203ENST00000563623 DNAH7Q8WXX0 4024 aa6.79□□□□□ -1.32
ABCA3-203ENST00000563623 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
ABCA3-203ENST00000563623 KRTAP13-2Q52LG2 175 aa6.76□□□□□ -1.33
ABCA3-203ENST00000563623 Q8N1X5 172 aa6.76□□□□□ -1.33
ABCA3-203ENST00000563623 ROMO1P60602 79 aa6.75□□□□□ -1.33
ABCA3-203ENST00000563623 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
ABCA3-203ENST00000563623 TYMSOSQ8TAI1 123 aa6.73□□□□□ -1.33
ABCA3-203ENST00000563623 KRTAP10-1P60331 282 aa6.71□□□□□ -1.34
ABCA3-203ENST00000563623 A0A0A0MQY5 61 aa6.7□□□□□ -1.34
ABCA3-203ENST00000563623 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
ABCA3-203ENST00000563623 DNAH8Q96JB1 4490 aa6.68□□□□□ -1.34
ABCA3-203ENST00000563623 FRAS1Q86XX4 4008 aa6.67□□□□□ -1.34
ABCA3-203ENST00000563623 STARD9Q9P2P6 4700 aa6.65□□□□□ -1.35
ABCA3-203ENST00000563623 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
ABCA3-203ENST00000563623 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
ABCA3-203ENST00000563623 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
ABCA3-203ENST00000563623 DMBT1Q9UGM3 2413 aaPredicted RBP6.61□□□□□ -1.35
ABCA3-203ENST00000563623 SMR3BP02814 79 aaPredicted RBP6.61□□□□□ -1.35
ABCA3-203ENST00000563623 KMT2AQ03164 3969 aa6.6□□□□□ -1.35
ABCA3-203ENST00000563623 KRTAP1-4P0C5Y4 121 aa6.59□□□□□ -1.35
ABCA3-203ENST00000563623 LINC00304Q8N9R0 145 aa6.59□□□□□ -1.35
ABCA3-203ENST00000563623 VPS13DQ5THJ4 4388 aa6.59□□□□□ -1.36
ABCA3-203ENST00000563623 DNAH17Q9UFH2 4485 aa6.57□□□□□ -1.36
ABCA3-203ENST00000563623 K7ERS5 55 aa6.56□□□□□ -1.36
ABCA3-203ENST00000563623 HECTD4Q9Y4D8 3996 aa6.56□□□□□ -1.36
ABCA3-203ENST00000563623 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
ABCA3-203ENST00000563623 A8MUU9 505 aa6.55□□□□□ -1.36
ABCA3-203ENST00000563623 DNAH11Q96DT5 4516 aa6.53□□□□□ -1.36
ABCA3-203ENST00000563623 DYNC2H1Q8NCM8 4307 aaKnown RBP6.52□□□□□ -1.37
ABCA3-203ENST00000563623 PRKDCP78527 4128 aaKnown RBP6.52□□□□□ -1.37
ABCA3-203ENST00000563623 Q6ZSA8 131 aa6.52□□□□□ -1.37
ABCA3-203ENST00000563623 DNAH2Q9P225 4427 aa6.5□□□□□ -1.37
ABCA3-203ENST00000563623 P0C880 135 aa6.49□□□□□ -1.37
ABCA3-203ENST00000563623 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
ABCA3-203ENST00000563623 A0A1B0GU33 70 aa6.47□□□□□ -1.37
ABCA3-203ENST00000563623 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.38
ABCA3-203ENST00000563623 ALMS1Q8TCU4 4167 aa6.45□□□□□ -1.38
ABCA3-203ENST00000563623 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
ABCA3-203ENST00000563623 H0YAA0 97 aa6.41□□□□□ -1.38
ABCA3-203ENST00000563623 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
ABCA3-203ENST00000563623 H1FX-AS1Q4G0G2 97 aa6.37□□□□□ -1.39
ABCA3-203ENST00000563623 DNAH5Q8TE73 4624 aa6.36□□□□□ -1.39
ABCA3-203ENST00000563623 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
ABCA3-203ENST00000563623 A0A0D9SG42 100 aa6.33□□□□□ -1.4
ABCA3-203ENST00000563623 RPS29P62273 56 aaKnown RBP6.3□□□□□ -1.4
ABCA3-203ENST00000563623 LUZP6Q538Z0 58 aa6.29□□□□□ -1.4
ABCA3-203ENST00000563623 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
ABCA3-203ENST00000563623 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
ABCA3-203ENST00000563623 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
ABCA3-203ENST00000563623 HYDINQ4G0P3 5121 aa6.21□□□□□ -1.41
ABCA3-203ENST00000563623 FAT1Q14517 4588 aa6.16□□□□□ -1.42
ABCA3-203ENST00000563623 RPL37P61927 97 aaKnown RBP6.16□□□□□ -1.42
ABCA3-203ENST00000563623 PKD1P98161 4303 aa6.15□□□□□ -1.43
ABCA3-203ENST00000563623 S4R3F8 94 aa6.12□□□□□ -1.43
ABCA3-203ENST00000563623 FAT2Q9NYQ8 4349 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms