RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 NPC2P61916 151 aa3.68□□□□□ -1.82
HERPUD1-206ENST00000563343 HIST1H4GQ99525 98 aa3.68□□□□□ -1.82
HERPUD1-206ENST00000563343 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
HERPUD1-206ENST00000563343 KMT2DO14686 5537 aa3.68□□□□□ -1.82
HERPUD1-206ENST00000563343 TRBV7-7A0A0K0K1E9 115 aa3.67□□□□□ -1.82
HERPUD1-206ENST00000563343 H3BMG7 143 aa3.67□□□□□ -1.82
HERPUD1-206ENST00000563343 FXYD2P54710 66 aa3.67□□□□□ -1.82
HERPUD1-206ENST00000563343 NOTCH2NLQ7Z3S9 236 aa3.67□□□□□ -1.82
HERPUD1-206ENST00000563343 NHP2Q9NX24 153 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-206ENST00000563343 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
HERPUD1-206ENST00000563343 J3QQQ9 107 aa3.66□□□□□ -1.82
HERPUD1-206ENST00000563343 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
HERPUD1-206ENST00000563343 SCGB1D4Q6XE38 83 aa3.66□□□□□ -1.82
HERPUD1-206ENST00000563343 Q6ZVH6 145 aa3.66□□□□□ -1.82
HERPUD1-206ENST00000563343 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
HERPUD1-206ENST00000563343 A0A0B4J2C4 111 aa3.65□□□□□ -1.83
HERPUD1-206ENST00000563343 A0A1B0GV72 72 aa3.65□□□□□ -1.83
HERPUD1-206ENST00000563343 ZNF815PA8K554 130 aa3.65□□□□□ -1.83
HERPUD1-206ENST00000563343 A8MWP4 228 aa3.65□□□□□ -1.83
HERPUD1-206ENST00000563343 OR13C6PQ8NH95 151 aa3.65□□□□□ -1.83
HERPUD1-206ENST00000563343 RAB37Q96AX2 223 aa3.65□□□□□ -1.83
HERPUD1-206ENST00000563343 SPANXDQ9BXN6 97 aa3.65□□□□□ -1.83
HERPUD1-206ENST00000563343 SPANXCQ9NY87 97 aa3.65□□□□□ -1.83
HERPUD1-206ENST00000563343 TRBV7-6A0A0J9YX20 115 aa3.64□□□□□ -1.83
HERPUD1-206ENST00000563343 A0A0J9YXY3 114 aa3.64□□□□□ -1.83
HERPUD1-206ENST00000563343 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
HERPUD1-206ENST00000563343 LITAFQ99732 161 aa3.64□□□□□ -1.83
HERPUD1-206ENST00000563343 A6NN06 94 aa3.63□□□□□ -1.83
HERPUD1-206ENST00000563343 TEN1Q86WV5 123 aa3.63□□□□□ -1.83
HERPUD1-206ENST00000563343 LINC00308Q8TCZ7 52 aa3.63□□□□□ -1.83
HERPUD1-206ENST00000563343 PPDPFLQ8WWR9 84 aa3.63□□□□□ -1.83
HERPUD1-206ENST00000563343 TIMM17BO60830 172 aa3.62□□□□□ -1.83
HERPUD1-206ENST00000563343 CLEC2BQ92478 149 aa3.62□□□□□ -1.83
HERPUD1-206ENST00000563343 IFITM1P13164 125 aa3.61□□□□□ -1.83
HERPUD1-206ENST00000563343 SEC61GP60059 68 aa3.61□□□□□ -1.83
HERPUD1-206ENST00000563343 Q6ZVQ6 151 aa3.61□□□□□ -1.83
HERPUD1-206ENST00000563343 PRO1854Q9UHT4 67 aa3.61□□□□□ -1.83
HERPUD1-206ENST00000563343 PRO0461Q9UI25 63 aa3.61□□□□□ -1.83
HERPUD1-206ENST00000563343 H3BT86 120 aa3.6□□□□□ -1.83
HERPUD1-206ENST00000563343 K7ERJ3 54 aa3.6□□□□□ -1.83
HERPUD1-206ENST00000563343 LST1O00453 97 aa3.6□□□□□ -1.83
HERPUD1-206ENST00000563343 COX6CP09669 75 aa3.6□□□□□ -1.83
HERPUD1-206ENST00000563343 DSCR10P59022 87 aa3.6□□□□□ -1.83
HERPUD1-206ENST00000563343 ATXN8Q156A1 80 aa3.6□□□□□ -1.83
HERPUD1-206ENST00000563343 Q6JHZ5 121 aa3.6□□□□□ -1.83
HERPUD1-206ENST00000563343 FAM240AA0A1B0GVK7 77 aa3.59□□□□□ -1.83
HERPUD1-206ENST00000563343 MT1BP07438 61 aa3.59□□□□□ -1.83
HERPUD1-206ENST00000563343 SCGB1C2P0DMR2 95 aa3.59□□□□□ -1.83
HERPUD1-206ENST00000563343 ETDBQ3ZM63 59 aa3.59□□□□□ -1.83
HERPUD1-206ENST00000563343 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
HERPUD1-206ENST00000563343 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
HERPUD1-206ENST00000563343 TTTY13Q9BZ97 58 aa3.59□□□□□ -1.83
HERPUD1-206ENST00000563343 F8WEM9 126 aa3.58□□□□□ -1.84
HERPUD1-206ENST00000563343 NAA38Q9BRA0 125 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-206ENST00000563343 ACYP1P07311 99 aa3.57□□□□□ -1.84
HERPUD1-206ENST00000563343 PSMB2P49721 201 aa3.57□□□□□ -1.84
HERPUD1-206ENST00000563343 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
HERPUD1-206ENST00000563343 ANKRD29Q8N6D5 301 aa3.56□□□□□ -1.84
HERPUD1-206ENST00000563343 TRAV13-2A0A0B4J235 113 aa3.55□□□□□ -1.84
HERPUD1-206ENST00000563343 SNCGO76070 127 aa3.55□□□□□ -1.84
HERPUD1-206ENST00000563343 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
HERPUD1-206ENST00000563343 IMUPQ9GZP8 106 aa3.54□□□□□ -1.84
HERPUD1-206ENST00000563343 C9JAW5 83 aa3.53□□□□□ -1.84
HERPUD1-206ENST00000563343 SPRR2EP22531 72 aa3.53□□□□□ -1.84
HERPUD1-206ENST00000563343 SPRR2BP35325 72 aa3.53□□□□□ -1.84
HERPUD1-206ENST00000563343 SPRR2AP35326 72 aa3.53□□□□□ -1.84
HERPUD1-206ENST00000563343 TRACP01848 142 aa3.52□□□□□ -1.85
HERPUD1-206ENST00000563343 IGKV2-30P06310 120 aa3.52□□□□□ -1.85
HERPUD1-206ENST00000563343 LINC00313P59037 77 aa3.52□□□□□ -1.85
HERPUD1-206ENST00000563343 Q6ZQY7 126 aa3.52□□□□□ -1.85
HERPUD1-206ENST00000563343 MUSTN1Q8IVN3 82 aa3.52□□□□□ -1.85
HERPUD1-206ENST00000563343 SMIM11BQ8TCY0 68 aa3.52□□□□□ -1.85
HERPUD1-206ENST00000563343 SS18L2Q9UHA2 77 aa3.52□□□□□ -1.85
HERPUD1-206ENST00000563343 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
HERPUD1-206ENST00000563343 LINC00575Q6W349 94 aa3.51□□□□□ -1.85
HERPUD1-206ENST00000563343 ANAPC13Q9BS18 74 aa3.51□□□□□ -1.85
HERPUD1-206ENST00000563343 A0A1B0GX51 115 aa3.49□□□□□ -1.85
HERPUD1-206ENST00000563343 SPINK7P58062 85 aa3.49□□□□□ -1.85
HERPUD1-206ENST00000563343 A0A087WSZ3 146 aa3.48□□□□□ -1.85
HERPUD1-206ENST00000563343 H0YGX0 51 aa3.48□□□□□ -1.85
HERPUD1-206ENST00000563343 H3BQ85 93 aa3.48□□□□□ -1.85
HERPUD1-206ENST00000563343 MT-ATP8P03928 68 aa3.48□□□□□ -1.85
HERPUD1-206ENST00000563343 LINC00643Q86TS7 51 aa3.48□□□□□ -1.85
HERPUD1-206ENST00000563343 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
HERPUD1-206ENST00000563343 A0A1W2PNM2 257 aa3.47□□□□□ -1.85
HERPUD1-206ENST00000563343 hADV29S1A0JD25 119 aa3.47□□□□□ -1.85
HERPUD1-206ENST00000563343 DNAL4O96015 105 aa3.47□□□□□ -1.85
HERPUD1-206ENST00000563343 NDUFV3P56181 108 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-206ENST00000563343 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
HERPUD1-206ENST00000563343 Q5VV11 94 aa3.47□□□□□ -1.85
HERPUD1-206ENST00000563343 ATP5EP2Q5VTU8 51 aa3.46□□□□□ -1.86
HERPUD1-206ENST00000563343 WFDC13Q8IUB5 93 aa3.46□□□□□ -1.86
HERPUD1-206ENST00000563343 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-206ENST00000563343 ZCCHC13Q8WW36 166 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-206ENST00000563343 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
HERPUD1-206ENST00000563343 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
HERPUD1-206ENST00000563343 JMJD7-PLA2G4BH0Y9G9 81 aa3.43□□□□□ -1.86
HERPUD1-206ENST00000563343 ATOX1O00244 68 aa3.43□□□□□ -1.86
HERPUD1-206ENST00000563343 IGKV4-1P06312 121 aa3.43□□□□□ -1.86
HERPUD1-206ENST00000563343 UQCRQO14949 82 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms