RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 KRTAP19-5Q3LI72 72 aa-0.52□□□□□ -2.49
CHD9-204ENST00000561869 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.52□□□□□ -2.49
CHD9-204ENST00000561869 CSMD1Q96PZ7 3565 aa-0.52□□□□□ -2.49
CHD9-204ENST00000561869 SMARCA2P51531 1590 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 ACACAQ13085 2346 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 DCAF1Q9Y4B6 1507 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 DNAH10Q8IVF4 4471 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 MT1HP80294 61 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 PRLHP81277 87 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 NREPQ16612 68 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 DDX60LQ5H9U9 1706 aaKnown RBP-0.53□□□□□ -2.49
CHD9-204ENST00000561869 PLCH1Q4KWH8 1693 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 CFAP43Q8NDM7 1665 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 SRCAPQ6ZRS2 3230 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 EYSQ5T1H1 3165 aa-0.53□□□□□ -2.49
CHD9-204ENST00000561869 THOC2Q8NI27 1593 aaKnown RBP-0.53□□□□□ -2.49
CHD9-204ENST00000561869 ABCC1P33527 1531 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 KDM5DQ9BY66 1539 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 ERVK-7P63135 1459 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 CD163L1Q9NR16 1453 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 C5orf42Q9H799 3197 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 ADIRFQ15847 76 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 CHD7Q9P2D1 2997 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 TLN1Q9Y490 2541 aaKnown RBP-0.54□□□□□ -2.5
CHD9-204ENST00000561869 DNAH5Q8TE73 4624 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 CFAP74Q9C0B2 1584 aa-0.54□□□□□ -2.5
CHD9-204ENST00000561869 SPENQ96T58 3664 aaKnown RBP-0.54□□□□□ -2.5
CHD9-204ENST00000561869 ANKRD50Q9ULJ7 1429 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 ITPR2Q14571 2701 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 SMG1Q96Q15 3661 aaKnown RBP-0.55□□□□□ -2.5
CHD9-204ENST00000561869 RNF17Q9BXT8 1623 aaKnown RBP-0.55□□□□□ -2.5
CHD9-204ENST00000561869 DEFB131BA0A096LNP1 70 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 SMIM13P0DJ93 91 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 DEFB130BP0DP73 79 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 DEFB130AP0DP74 79 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 DEFA5Q01523 94 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 S100A13Q99584 98 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 ITSN1Q15811 1721 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 RICTORQ6R327 1708 aa-0.55□□□□□ -2.5
CHD9-204ENST00000561869 FRYQ5TBA9 3013 aa-0.56□□□□□ -2.5
CHD9-204ENST00000561869 H3BUT2 72 aa-0.56□□□□□ -2.5
CHD9-204ENST00000561869 SMR3BP02814 79 aaPredicted RBP-0.56□□□□□ -2.5
CHD9-204ENST00000561869 IAPPP10997 89 aa-0.56□□□□□ -2.5
CHD9-204ENST00000561869 MT1XP80297 61 aa-0.56□□□□□ -2.5
CHD9-204ENST00000561869 BVES-AS1Q5T3Y7 98 aa-0.56□□□□□ -2.5
CHD9-204ENST00000561869 S4R3F8 94 aa-0.56□□□□□ -2.5
CHD9-204ENST00000561869 MYO9AB2RTY4 2548 aa-0.56□□□□□ -2.5
CHD9-204ENST00000561869 CCDC18Q5T9S5 1454 aa-0.56□□□□□ -2.5
CHD9-204ENST00000561869 ZC3H13Q5T200 1668 aaKnown RBP-0.56□□□□□ -2.5
CHD9-204ENST00000561869 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.56□□□□□ -2.5
CHD9-204ENST00000561869 A0A087WXM4 84 aa-0.57□□□□□ -2.5
CHD9-204ENST00000561869 MT1GP13640 62 aa-0.57□□□□□ -2.5
CHD9-204ENST00000561869 KCNQ1DNQ9H478 68 aa-0.57□□□□□ -2.5
CHD9-204ENST00000561869 ARHGAP35Q9NRY4 1499 aa-0.57□□□□□ -2.5
CHD9-204ENST00000561869 TJP1Q07157 1748 aa-0.58□□□□□ -2.5
CHD9-204ENST00000561869 DEFB1P60022 68 aa-0.58□□□□□ -2.5
CHD9-204ENST00000561869 DEFB110Q30KQ9 67 aa-0.58□□□□□ -2.5
CHD9-204ENST00000561869 CFAP46Q8IYW2 2715 aa-0.58□□□□□ -2.5
CHD9-204ENST00000561869 TLN2Q9Y4G6 2542 aa-0.58□□□□□ -2.5
CHD9-204ENST00000561869 MRPL33O75394 65 aaKnown RBP-0.59□□□□□ -2.5
CHD9-204ENST00000561869 HFM1A2PYH4 1435 aa-0.59□□□□□ -2.5
CHD9-204ENST00000561869 RALGAPBQ86X10 1494 aa-0.6□□□□□ -2.5
CHD9-204ENST00000561869 TRRAPQ9Y4A5 3859 aa-0.6□□□□□ -2.51
CHD9-204ENST00000561869 INO80Q9ULG1 1556 aaPredicted RBP-0.6□□□□□ -2.51
CHD9-204ENST00000561869 C18orf32Q8TCD1 76 aa-0.6□□□□□ -2.51
CHD9-204ENST00000561869 ADGRG4Q8IZF6 3080 aa-0.61□□□□□ -2.51
CHD9-204ENST00000561869 ABCA8O94911 1581 aa-0.61□□□□□ -2.51
CHD9-204ENST00000561869 ANKARQ7Z5J8 1434 aa-0.61□□□□□ -2.51
CHD9-204ENST00000561869 ITSN2Q9NZM3 1697 aa-0.61□□□□□ -2.51
CHD9-204ENST00000561869 MT1EP04732 61 aa-0.61□□□□□ -2.51
CHD9-204ENST00000561869 UBL5Q9BZL1 73 aa-0.61□□□□□ -2.51
CHD9-204ENST00000561869 KIAA0586Q9BVV6 1533 aa-0.61□□□□□ -2.51
CHD9-204ENST00000561869 MGAQ8IWI9 3026 aa-0.62□□□□□ -2.51
CHD9-204ENST00000561869 RRBP1Q9P2E9 1410 aaKnown RBP-0.62□□□□□ -2.51
CHD9-204ENST00000561869 MT1HL1P0DM35 61 aa-0.62□□□□□ -2.51
CHD9-204ENST00000561869 CRIP1P50238 77 aa-0.62□□□□□ -2.51
CHD9-204ENST00000561869 DEFB106AQ8N104 65 aa-0.62□□□□□ -2.51
CHD9-204ENST00000561869 DMXL2Q8TDJ6 3036 aa-0.62□□□□□ -2.51
CHD9-204ENST00000561869 NHSQ6T4R5 1651 aa-0.62□□□□□ -2.51
CHD9-204ENST00000561869 LMTK2Q8IWU2 1503 aa-0.63□□□□□ -2.51
CHD9-204ENST00000561869 MT1LQ93083 61 aa-0.63□□□□□ -2.51
CHD9-204ENST00000561869 PARP4Q9UKK3 1724 aaKnown RBP-0.64□□□□□ -2.51
CHD9-204ENST00000561869 LRBAP50851 2863 aa-0.64□□□□□ -2.51
CHD9-204ENST00000561869 KRTAP8-1Q8IUC2 63 aa-0.64□□□□□ -2.51
CHD9-204ENST00000561869 NRAPQ86VF7 1730 aa-0.64□□□□□ -2.51
CHD9-204ENST00000561869 MT2AP02795 61 aa-0.65□□□□□ -2.51
CHD9-204ENST00000561869 RPS27P42677 84 aaKnown RBP-0.65□□□□□ -2.51
CHD9-204ENST00000561869 WT1-ASQ06250 92 aa-0.65□□□□□ -2.51
CHD9-204ENST00000561869 ENHOQ6UWT2 76 aa-0.65□□□□□ -2.51
CHD9-204ENST00000561869 RPS27LQ71UM5 84 aaKnown RBP-0.65□□□□□ -2.51
CHD9-204ENST00000561869 MT1MQ8N339 61 aa-0.65□□□□□ -2.51
CHD9-204ENST00000561869 WDFY4Q6ZS81 3184 aa-0.65□□□□□ -2.51
CHD9-204ENST00000561869 CSMD2Q7Z408 3487 aa-0.66□□□□□ -2.51
CHD9-204ENST00000561869 LRRIQ1Q96JM4 1722 aa-0.66□□□□□ -2.51
CHD9-204ENST00000561869 TOGARAM1Q9Y4F4 1720 aa-0.66□□□□□ -2.51
CHD9-204ENST00000561869 ETDCA0A1B0GVM5 59 aa-0.66□□□□□ -2.52
CHD9-204ENST00000561869 ANKRD36CQ5JPF3 1778 aa-0.66□□□□□ -2.52
CHD9-204ENST00000561869 KIF1AQ12756 1690 aa-0.66□□□□□ -2.52
CHD9-204ENST00000561869 ATMQ13315 3056 aa-0.66□□□□□ -2.52
CHD9-204ENST00000561869 DCHS1Q96JQ0 3298 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms