RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 IGKV4-1P06312 121 aa7.21□□□□□ -1.26
HERC1-214ENST00000561400 RPL37AP8A6NKH3 93 aa7.2□□□□□ -1.26
HERC1-214ENST00000561400 NDUFB1O75438 58 aa7.2□□□□□ -1.26
HERC1-214ENST00000561400 VPS13BQ7Z7G8 4022 aa7.19□□□□□ -1.26
HERC1-214ENST00000561400 LINC00528Q8N1L1 170 aa7.19□□□□□ -1.26
HERC1-214ENST00000561400 IGLV1-50A0A075B6I6 118 aa7.18□□□□□ -1.26
HERC1-214ENST00000561400 LINC00208Q96KT6 92 aa7.18□□□□□ -1.26
HERC1-214ENST00000561400 PRR4Q16378 134 aa7.17□□□□□ -1.26
HERC1-214ENST00000561400 PSORS1C2Q9UIG4 136 aa7.17□□□□□ -1.26
HERC1-214ENST00000561400 IGLV6-57P01721 117 aa7.16□□□□□ -1.26
HERC1-214ENST00000561400 SRRM2Q9UQ35 2752 aaKnown RBP7.15□□□□□ -1.26
HERC1-214ENST00000561400 Q8N1X5 172 aa7.14□□□□□ -1.27
HERC1-214ENST00000561400 KRTAP10-4P60372 401 aaPredicted RBP7.13□□□□□ -1.27
HERC1-214ENST00000561400 KCNQ1DNQ9H478 68 aa7.13□□□□□ -1.27
HERC1-214ENST00000561400 FAM229AH3BQW9 127 aa7.13□□□□□ -1.27
HERC1-214ENST00000561400 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
HERC1-214ENST00000561400 C1orf137Q5JT78 98 aa7.12□□□□□ -1.27
HERC1-214ENST00000561400 Q5VSD8 79 aa7.12□□□□□ -1.27
HERC1-214ENST00000561400 NOTCH2NLQ7Z3S9 236 aa7.12□□□□□ -1.27
HERC1-214ENST00000561400 Q8N9L7 120 aa7.12□□□□□ -1.27
HERC1-214ENST00000561400 REG3GQ6UW15 175 aa7.12□□□□□ -1.27
HERC1-214ENST00000561400 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
HERC1-214ENST00000561400 HERC2O95714 4834 aa7.11□□□□□ -1.27
HERC1-214ENST00000561400 LINC01558Q9Y6Z2 57 aa7.11□□□□□ -1.27
HERC1-214ENST00000561400 SPRR1AP35321 89 aa7.1□□□□□ -1.27
HERC1-214ENST00000561400 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
HERC1-214ENST00000561400 SMIM29Q86T20 159 aa7.09□□□□□ -1.27
HERC1-214ENST00000561400 H3BQ85 93 aa7.09□□□□□ -1.27
HERC1-214ENST00000561400 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
HERC1-214ENST00000561400 IGLV7-43P04211 117 aa7.08□□□□□ -1.28
HERC1-214ENST00000561400 SPINK7P58062 85 aa7.08□□□□□ -1.28
HERC1-214ENST00000561400 ETDCA0A1B0GVM5 59 aa7.08□□□□□ -1.28
HERC1-214ENST00000561400 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
HERC1-214ENST00000561400 ROMO1P60602 79 aa7.07□□□□□ -1.28
HERC1-214ENST00000561400 PRLHP81277 87 aa7.07□□□□□ -1.28
HERC1-214ENST00000561400 KRTAP13-1Q8IUC0 172 aa7.07□□□□□ -1.28
HERC1-214ENST00000561400 ZNF861PO60384 105 aa7.04□□□□□ -1.28
HERC1-214ENST00000561400 CSAG1Q6PB30 78 aa7.04□□□□□ -1.28
HERC1-214ENST00000561400 LINC00575Q6W349 94 aa7.03□□□□□ -1.28
HERC1-214ENST00000561400 Q6ZRX8 168 aa7.03□□□□□ -1.28
HERC1-214ENST00000561400 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
HERC1-214ENST00000561400 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
HERC1-214ENST00000561400 COX7BP24311 80 aa7.01□□□□□ -1.29
HERC1-214ENST00000561400 FLG2Q5D862 2391 aaPredicted RBP7□□□□□ -1.29
HERC1-214ENST00000561400 SPINK6Q6UWN8 80 aa7□□□□□ -1.29
HERC1-214ENST00000561400 COA5Q86WW8 74 aa6.99□□□□□ -1.29
HERC1-214ENST00000561400 ABCA13Q86UQ4 5058 aa6.99□□□□□ -1.29
HERC1-214ENST00000561400 A0A1B0GW54 56 aa6.96□□□□□ -1.3
HERC1-214ENST00000561400 DHRS4-AS1Q9P1J3 65 aa6.96□□□□□ -1.3
HERC1-214ENST00000561400 MYCBP2O75592 4640 aa6.96□□□□□ -1.3
HERC1-214ENST00000561400 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
HERC1-214ENST00000561400 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
HERC1-214ENST00000561400 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
HERC1-214ENST00000561400 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
HERC1-214ENST00000561400 ANAPC11Q9NYG5 84 aa6.93□□□□□ -1.3
HERC1-214ENST00000561400 Q6ZQY7 126 aa6.92□□□□□ -1.3
HERC1-214ENST00000561400 H3BPC8 53 aa6.92□□□□□ -1.3
HERC1-214ENST00000561400 FAT3Q8TDW7 4589 aa6.91□□□□□ -1.3
HERC1-214ENST00000561400 H0Y9P7 68 aa6.91□□□□□ -1.3
HERC1-214ENST00000561400 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.3
HERC1-214ENST00000561400 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.89□□□□□ -1.31
HERC1-214ENST00000561400 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
HERC1-214ENST00000561400 KRTAP16-1A8MUX0 517 aa6.89□□□□□ -1.31
HERC1-214ENST00000561400 DEFB105AQ8NG35 78 aa6.88□□□□□ -1.31
HERC1-214ENST00000561400 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
HERC1-214ENST00000561400 IGLV5-48A0A075B6I7 105 aa6.87□□□□□ -1.31
HERC1-214ENST00000561400 P0C880 135 aa6.87□□□□□ -1.31
HERC1-214ENST00000561400 Q8N377 158 aa6.86□□□□□ -1.31
HERC1-214ENST00000561400 IGLV7-46A0A075B6I9 117 aa6.86□□□□□ -1.31
HERC1-214ENST00000561400 SPRR1BP22528 89 aa6.86□□□□□ -1.31
HERC1-214ENST00000561400 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
HERC1-214ENST00000561400 TNXBP22105 4242 aa6.84□□□□□ -1.32
HERC1-214ENST00000561400 KRTAP29-1A8MX34 341 aaPredicted RBP6.83□□□□□ -1.32
HERC1-214ENST00000561400 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
HERC1-214ENST00000561400 KRTAP10-8P60410 259 aa6.82□□□□□ -1.32
HERC1-214ENST00000561400 IGLV9-49A0A0B4J1Y8 123 aa6.81□□□□□ -1.32
HERC1-214ENST00000561400 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
HERC1-214ENST00000561400 DSCR10P59022 87 aa6.79□□□□□ -1.32
HERC1-214ENST00000561400 TYMSOSQ8TAI1 123 aa6.79□□□□□ -1.32
HERC1-214ENST00000561400 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
HERC1-214ENST00000561400 K7EQZ3 153 aa6.77□□□□□ -1.33
HERC1-214ENST00000561400 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
HERC1-214ENST00000561400 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
HERC1-214ENST00000561400 J3QL48 77 aa6.75□□□□□ -1.33
HERC1-214ENST00000561400 Q8NBF4 154 aa6.75□□□□□ -1.33
HERC1-214ENST00000561400 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
HERC1-214ENST00000561400 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
HERC1-214ENST00000561400 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
HERC1-214ENST00000561400 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
HERC1-214ENST00000561400 IGFL1Q6UW32 110 aa6.7□□□□□ -1.34
HERC1-214ENST00000561400 HRES1P13985 223 aa6.68□□□□□ -1.34
HERC1-214ENST00000561400 DEFB116Q30KQ4 102 aa6.66□□□□□ -1.34
HERC1-214ENST00000561400 C20orf166-AS1Q96NR2 134 aa6.66□□□□□ -1.34
HERC1-214ENST00000561400 A8MWP4 228 aa6.66□□□□□ -1.34
HERC1-214ENST00000561400 HERC1Q15751 4861 aa6.65□□□□□ -1.34
HERC1-214ENST00000561400 SPINK1P00995 79 aa6.65□□□□□ -1.35
HERC1-214ENST00000561400 WFDC13Q8IUB5 93 aa6.65□□□□□ -1.35
HERC1-214ENST00000561400 A0A087WSZ3 146 aa6.62□□□□□ -1.35
HERC1-214ENST00000561400 C8orf17Q9NRJ1 99 aa6.62□□□□□ -1.35
HERC1-214ENST00000561400 A8MUU9 505 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms