RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 ITSN1Q15811 1721 aa-0.85□□□□□ -2.55
HMBOX1-216ENST00000561377 C20orf78Q9BR46 151 aa-0.85□□□□□ -2.55
HMBOX1-216ENST00000561377 ZC3H13Q5T200 1668 aaKnown RBP-0.85□□□□□ -2.55
HMBOX1-216ENST00000561377 PIK3C2BO00750 1634 aa-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 TOGARAM1Q9Y4F4 1720 aa-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 PEG3Q9GZU2 1588 aa-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 HFM1A2PYH4 1435 aa-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 MMP24-AS1A0A0U1RRL7 71 aa-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 PVALEFA0A1B0GWK0 134 aa-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 NDUFA4O00483 81 aa-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 ATP5EP2Q5VTU8 51 aa-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 SPTBN5Q9NRC6 3674 aaKnown RBP-0.86□□□□□ -2.55
HMBOX1-216ENST00000561377 ZNF831Q5JPB2 1677 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 ITSN2Q9NZM3 1697 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 DNAH17Q9UFH2 4485 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 ANKRD36CQ5JPF3 1778 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 MT1HL1P0DM35 61 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 PYY3Q5JQD4 70 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 KIF14Q15058 1648 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 EYSQ5T1H1 3165 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 CDC42BPAQ5VT25 1732 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 PARP4Q9UKK3 1724 aaKnown RBP-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 SPENQ96T58 3664 aaKnown RBP-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 CELSR3Q9NYQ7 3312 aa-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 INO80Q9ULG1 1556 aaPredicted RBP-0.87□□□□□ -2.55
HMBOX1-216ENST00000561377 CFAP43Q8NDM7 1665 aa-0.88□□□□□ -2.55
HMBOX1-216ENST00000561377 RNF17Q9BXT8 1623 aaKnown RBP-0.88□□□□□ -2.55
HMBOX1-216ENST00000561377 MT1EP04732 61 aa-0.88□□□□□ -2.55
HMBOX1-216ENST00000561377 BVES-AS1Q5T3Y7 98 aa-0.88□□□□□ -2.55
HMBOX1-216ENST00000561377 KRTAP8-1Q8IUC2 63 aa-0.88□□□□□ -2.55
HMBOX1-216ENST00000561377 MGAQ8IWI9 3026 aa-0.88□□□□□ -2.55
HMBOX1-216ENST00000561377 PLCH1Q4KWH8 1693 aa-0.88□□□□□ -2.55
HMBOX1-216ENST00000561377 AKAP12Q02952 1782 aa-0.88□□□□□ -2.55
HMBOX1-216ENST00000561377 IGLV5-48A0A075B6I7 105 aa-0.89□□□□□ -2.55
HMBOX1-216ENST00000561377 SMR3BP02814 79 aaPredicted RBP-0.89□□□□□ -2.55
HMBOX1-216ENST00000561377 S100A8P05109 93 aa-0.89□□□□□ -2.55
HMBOX1-216ENST00000561377 WT1-ASQ06250 92 aa-0.89□□□□□ -2.55
HMBOX1-216ENST00000561377 NREPQ16612 68 aa-0.89□□□□□ -2.55
HMBOX1-216ENST00000561377 SNHG12Q9BXW3 62 aa-0.89□□□□□ -2.55
HMBOX1-216ENST00000561377 RALGAPBQ86X10 1494 aa-0.89□□□□□ -2.55
HMBOX1-216ENST00000561377 KIF1AQ12756 1690 aa-0.89□□□□□ -2.55
HMBOX1-216ENST00000561377 TTC37Q6PGP7 1564 aa-0.9□□□□□ -2.55
HMBOX1-216ENST00000561377 PKIAP61925 76 aa-0.9□□□□□ -2.55
HMBOX1-216ENST00000561377 S100A16Q96FQ6 103 aaKnown RBP-0.9□□□□□ -2.55
HMBOX1-216ENST00000561377 UBL5Q9BZL1 73 aa-0.9□□□□□ -2.55
HMBOX1-216ENST00000561377 KCNQ1DNQ9H478 68 aa-0.9□□□□□ -2.55
HMBOX1-216ENST00000561377 NOP10Q9NPE3 64 aaKnown RBP-0.9□□□□□ -2.55
HMBOX1-216ENST00000561377 ADGRG4Q8IZF6 3080 aa-0.9□□□□□ -2.55
HMBOX1-216ENST00000561377 ARHGAP35Q9NRY4 1499 aa-0.91□□□□□ -2.55
HMBOX1-216ENST00000561377 ITPR2Q14571 2701 aa-0.91□□□□□ -2.55
HMBOX1-216ENST00000561377 KANTRA0A1W2PQU2 76 aa-0.91□□□□□ -2.56
HMBOX1-216ENST00000561377 H3BUA1 57 aa-0.91□□□□□ -2.56
HMBOX1-216ENST00000561377 MT1LQ93083 61 aa-0.91□□□□□ -2.56
HMBOX1-216ENST00000561377 KDM5DQ9BY66 1539 aa-0.91□□□□□ -2.56
HMBOX1-216ENST00000561377 TRRAPQ9Y4A5 3859 aa-0.91□□□□□ -2.56
HMBOX1-216ENST00000561377 PPLO60437 1756 aa-0.92□□□□□ -2.56
HMBOX1-216ENST00000561377 V9GYS6 101 aa-0.92□□□□□ -2.56
HMBOX1-216ENST00000561377 RICTORQ6R327 1708 aa-0.92□□□□□ -2.56
HMBOX1-216ENST00000561377 TLN1Q9Y490 2541 aaKnown RBP-0.93□□□□□ -2.56
HMBOX1-216ENST00000561377 SMG1Q96Q15 3661 aaKnown RBP-0.93□□□□□ -2.56
HMBOX1-216ENST00000561377 Q9H521 79 aa-0.93□□□□□ -2.56
HMBOX1-216ENST00000561377 UACAQ9BZF9 1416 aa-0.93□□□□□ -2.56
HMBOX1-216ENST00000561377 LY75O60449 1722 aa-0.93□□□□□ -2.56
HMBOX1-216ENST00000561377 NRAPQ86VF7 1730 aa-0.93□□□□□ -2.56
HMBOX1-216ENST00000561377 LRRIQ1Q96JM4 1722 aa-0.93□□□□□ -2.56
HMBOX1-216ENST00000561377 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.93□□□□□ -2.56
HMBOX1-216ENST00000561377 NHSQ6T4R5 1651 aa-0.94□□□□□ -2.56
HMBOX1-216ENST00000561377 DMXL2Q8TDJ6 3036 aa-0.94□□□□□ -2.56
HMBOX1-216ENST00000561377 RPS27P42677 84 aaKnown RBP-0.94□□□□□ -2.56
HMBOX1-216ENST00000561377 MINOS1Q5TGZ0 78 aa-0.94□□□□□ -2.56
HMBOX1-216ENST00000561377 RPS27LQ71UM5 84 aaKnown RBP-0.94□□□□□ -2.56
HMBOX1-216ENST00000561377 DNAH5Q8TE73 4624 aa-0.94□□□□□ -2.56
HMBOX1-216ENST00000561377 A0A087WXM4 84 aa-0.95□□□□□ -2.56
HMBOX1-216ENST00000561377 ABCC1P33527 1531 aa-0.95□□□□□ -2.56
HMBOX1-216ENST00000561377 TJP1Q07157 1748 aa-0.95□□□□□ -2.56
HMBOX1-216ENST00000561377 CSMD2Q7Z408 3487 aa-0.95□□□□□ -2.56
HMBOX1-216ENST00000561377 MAST1Q9Y2H9 1570 aa-0.96□□□□□ -2.56
HMBOX1-216ENST00000561377 DEFB121Q5J5C9 76 aa-0.96□□□□□ -2.56
HMBOX1-216ENST00000561377 C6orf48Q9UBA6 75 aa-0.96□□□□□ -2.56
HMBOX1-216ENST00000561377 DNAH10Q8IVF4 4471 aa-0.96□□□□□ -2.56
HMBOX1-216ENST00000561377 CD163L1Q9NR16 1453 aa-0.97□□□□□ -2.56
HMBOX1-216ENST00000561377 LINC01546A6NGU7 62 aa-0.97□□□□□ -2.56
HMBOX1-216ENST00000561377 SMIM13P0DJ93 91 aa-0.97□□□□□ -2.56
HMBOX1-216ENST00000561377 CDC42BPGQ6DT37 1551 aa-0.98□□□□□ -2.57
HMBOX1-216ENST00000561377 ETDCA0A1B0GVM5 59 aa-0.98□□□□□ -2.57
HMBOX1-216ENST00000561377 M0QY20 66 aa-0.98□□□□□ -2.57
HMBOX1-216ENST00000561377 CRIP1P50238 77 aa-0.98□□□□□ -2.57
HMBOX1-216ENST00000561377 LMTK2Q8IWU2 1503 aa-0.99□□□□□ -2.57
HMBOX1-216ENST00000561377 CFAP74Q9C0B2 1584 aa-0.99□□□□□ -2.57
HMBOX1-216ENST00000561377 M0QZ58 72 aa-0.99□□□□□ -2.57
HMBOX1-216ENST00000561377 FCER1GP30273 86 aa-0.99□□□□□ -2.57
HMBOX1-216ENST00000561377 DEFB114Q30KQ6 69 aa-0.99□□□□□ -2.57
HMBOX1-216ENST00000561377 MT1MQ8N339 61 aa-0.99□□□□□ -2.57
HMBOX1-216ENST00000561377 MYO5CQ9NQX4 1742 aa-0.99□□□□□ -2.57
HMBOX1-216ENST00000561377 ATMQ13315 3056 aa-1□□□□□ -2.57
HMBOX1-216ENST00000561377 DIP2AQ14689 1571 aa-1□□□□□ -2.57
HMBOX1-216ENST00000561377 MROH1Q8NDA8 1641 aa-1□□□□□ -2.57
HMBOX1-216ENST00000561377 ABCA13Q86UQ4 5058 aa-1□□□□□ -2.57
HMBOX1-216ENST00000561377 MT2AP02795 61 aa-1□□□□□ -2.57
HMBOX1-216ENST00000561377 ADIRFQ15847 76 aa-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms