RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CRIPTQ9P021 101 aa1.39□□□□□ -2.19
HERC1-211ENST00000560983 NAT8Q9UHE5 227 aa1.39□□□□□ -2.19
HERC1-211ENST00000560983 A0A087WSZ3 146 aa1.38□□□□□ -2.19
HERC1-211ENST00000560983 H3BUT2 72 aa1.38□□□□□ -2.19
HERC1-211ENST00000560983 IFITM2Q01629 132 aa1.38□□□□□ -2.19
HERC1-211ENST00000560983 KRTAP19-7Q3SYF9 63 aa1.38□□□□□ -2.19
HERC1-211ENST00000560983 LCA10Q71F78 164 aa1.38□□□□□ -2.19
HERC1-211ENST00000560983 PRR15Q8IV56 129 aa1.38□□□□□ -2.19
HERC1-211ENST00000560983 SIGMAR1Q99720 223 aa1.38□□□□□ -2.19
HERC1-211ENST00000560983 SPANXCQ9NY87 97 aa1.38□□□□□ -2.19
HERC1-211ENST00000560983 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
HERC1-211ENST00000560983 IGHV6-1A0A0B4J1U7 121 aa1.37□□□□□ -2.19
HERC1-211ENST00000560983 MT1EP04732 61 aa1.37□□□□□ -2.19
HERC1-211ENST00000560983 IGKV4-1P06312 121 aa1.37□□□□□ -2.19
HERC1-211ENST00000560983 CSAG1Q6PB30 78 aa1.37□□□□□ -2.19
HERC1-211ENST00000560983 SLC7A5P1Q8MH63 180 aa1.37□□□□□ -2.19
HERC1-211ENST00000560983 LINC00308Q8TCZ7 52 aa1.37□□□□□ -2.19
HERC1-211ENST00000560983 NHP2Q9NX24 153 aaKnown RBP1.37□□□□□ -2.19
HERC1-211ENST00000560983 A4D1N5 150 aa1.36□□□□□ -2.19
HERC1-211ENST00000560983 LEPROTO15243 131 aa1.36□□□□□ -2.19
HERC1-211ENST00000560983 C3orf79P0CE67 100 aa1.36□□□□□ -2.19
HERC1-211ENST00000560983 PMCHL1Q16048 86 aa1.36□□□□□ -2.19
HERC1-211ENST00000560983 DEFB116Q30KQ4 102 aa1.36□□□□□ -2.19
HERC1-211ENST00000560983 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
HERC1-211ENST00000560983 TRAV12-1A0A0B4J245 112 aa1.35□□□□□ -2.19
HERC1-211ENST00000560983 J3QQQ9 107 aa1.35□□□□□ -2.19
HERC1-211ENST00000560983 MT1GP13640 62 aa1.35□□□□□ -2.19
HERC1-211ENST00000560983 Q6ZQY7 126 aa1.35□□□□□ -2.19
HERC1-211ENST00000560983 SLC51BQ86UW2 128 aa1.35□□□□□ -2.19
HERC1-211ENST00000560983 PLAC4Q8WY50 150 aa1.35□□□□□ -2.19
HERC1-211ENST00000560983 LINC00472Q9H8W2 130 aa1.35□□□□□ -2.19
HERC1-211ENST00000560983 IGKV3D-7A0A0C4DH55 119 aa1.34□□□□□ -2.19
HERC1-211ENST00000560983 NMUP48645 174 aa1.34□□□□□ -2.19
HERC1-211ENST00000560983 KRTAP12-4P60329 112 aa1.34□□□□□ -2.19
HERC1-211ENST00000560983 LINC00575Q6W349 94 aa1.34□□□□□ -2.19
HERC1-211ENST00000560983 SMCO4Q9NRQ5 59 aa1.34□□□□□ -2.19
HERC1-211ENST00000560983 C8orf87E5RJ46 101 aa1.33□□□□□ -2.2
HERC1-211ENST00000560983 H0YAA0 97 aa1.33□□□□□ -2.2
HERC1-211ENST00000560983 LINC00614P0C842 121 aa1.33□□□□□ -2.2
HERC1-211ENST00000560983 A0A1B0GVX0 72 aa1.32□□□□□ -2.2
HERC1-211ENST00000560983 C4orf26Q17RF5 130 aa1.32□□□□□ -2.2
HERC1-211ENST00000560983 MT1MQ8N339 61 aa1.32□□□□□ -2.2
HERC1-211ENST00000560983 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
HERC1-211ENST00000560983 RAB37Q96AX2 223 aa1.32□□□□□ -2.2
HERC1-211ENST00000560983 SNHG12Q9BXW3 62 aa1.32□□□□□ -2.2
HERC1-211ENST00000560983 hADV29S1A0JD25 119 aa1.31□□□□□ -2.2
HERC1-211ENST00000560983 IFI27L1Q96BM0 104 aa1.31□□□□□ -2.2
HERC1-211ENST00000560983 S4R3F8 94 aa1.31□□□□□ -2.2
HERC1-211ENST00000560983 A6NDN8 102 aa1.3□□□□□ -2.2
HERC1-211ENST00000560983 TIMM17BO60830 172 aa1.3□□□□□ -2.2
HERC1-211ENST00000560983 LYRM7Q5U5X0 104 aa1.3□□□□□ -2.2
HERC1-211ENST00000560983 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.3□□□□□ -2.2
HERC1-211ENST00000560983 PPDPFLQ8WWR9 84 aa1.3□□□□□ -2.2
HERC1-211ENST00000560983 DSCR8Q96T75 97 aa1.3□□□□□ -2.2
HERC1-211ENST00000560983 A8MUN3 132 aa1.29□□□□□ -2.2
HERC1-211ENST00000560983 MT-ND4LP03901 98 aa1.29□□□□□ -2.2
HERC1-211ENST00000560983 PDE6GP18545 87 aa1.29□□□□□ -2.2
HERC1-211ENST00000560983 C18orf32Q8TCD1 76 aa1.29□□□□□ -2.2
HERC1-211ENST00000560983 FABP9Q0Z7S8 132 aa1.28□□□□□ -2.2
HERC1-211ENST00000560983 PEA15Q15121 130 aa1.28□□□□□ -2.2
HERC1-211ENST00000560983 TRBV7-4A0A0J9YYF1 115 aa1.27□□□□□ -2.21
HERC1-211ENST00000560983 E9PLD3 99 aa1.27□□□□□ -2.21
HERC1-211ENST00000560983 H3BMG7 143 aa1.27□□□□□ -2.21
HERC1-211ENST00000560983 VAMP3Q15836 100 aa1.27□□□□□ -2.21
HERC1-211ENST00000560983 SEC11CQ9BY50 192 aa1.27□□□□□ -2.21
HERC1-211ENST00000560983 PLNP26678 52 aa1.26□□□□□ -2.21
HERC1-211ENST00000560983 HERVK_113P61574 105 aa1.26□□□□□ -2.21
HERC1-211ENST00000560983 Q5W150 140 aa1.26□□□□□ -2.21
HERC1-211ENST00000560983 C2orf91Q6ZV80 131 aa1.26□□□□□ -2.21
HERC1-211ENST00000560983 PMCHL2Q9BQD1 86 aa1.26□□□□□ -2.21
HERC1-211ENST00000560983 HSPB8Q9UJY1 196 aa1.26□□□□□ -2.21
HERC1-211ENST00000560983 H0Y8G0 127 aa1.25□□□□□ -2.21
HERC1-211ENST00000560983 DPM2O94777 84 aa1.25□□□□□ -2.21
HERC1-211ENST00000560983 MUSTN1Q8IVN3 82 aa1.25□□□□□ -2.21
HERC1-211ENST00000560983 C8orf17Q9NRJ1 99 aa1.25□□□□□ -2.21
HERC1-211ENST00000560983 TRAPPC1Q9Y5R8 145 aa1.25□□□□□ -2.21
HERC1-211ENST00000560983 IGKCP01834 107 aa1.24□□□□□ -2.21
HERC1-211ENST00000560983 C7orf65Q6ZTY9 151 aa1.24□□□□□ -2.21
HERC1-211ENST00000560983 TCTE3Q8IZS6 198 aa1.24□□□□□ -2.21
HERC1-211ENST00000560983 C1orf64Q8NEQ6 169 aa1.24□□□□□ -2.21
HERC1-211ENST00000560983 MT1LQ93083 61 aa1.24□□□□□ -2.21
HERC1-211ENST00000560983 TTTY13Q9BZ97 58 aa1.24□□□□□ -2.21
HERC1-211ENST00000560983 A0A087WVE0 104 aa1.23□□□□□ -2.21
HERC1-211ENST00000560983 K7EQZ3 153 aa1.23□□□□□ -2.21
HERC1-211ENST00000560983 IFITM1P13164 125 aa1.23□□□□□ -2.21
HERC1-211ENST00000560983 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
HERC1-211ENST00000560983 CHCHD1Q96BP2 118 aaKnown RBP1.23□□□□□ -2.21
HERC1-211ENST00000560983 TRGC2P03986 189 aa1.22□□□□□ -2.21
HERC1-211ENST00000560983 KRTAP12-3P60328 96 aa1.22□□□□□ -2.21
HERC1-211ENST00000560983 RGS21Q2M5E4 152 aa1.22□□□□□ -2.21
HERC1-211ENST00000560983 COX19Q49B96 90 aa1.22□□□□□ -2.21
HERC1-211ENST00000560983 PET117Q6UWS5 81 aa1.22□□□□□ -2.21
HERC1-211ENST00000560983 ADM2Q7Z4H4 148 aa1.22□□□□□ -2.21
HERC1-211ENST00000560983 ANKRD29Q8N6D5 301 aa1.22□□□□□ -2.21
HERC1-211ENST00000560983 C12orf57Q99622 126 aa1.22□□□□□ -2.21
HERC1-211ENST00000560983 J3KT08 172 aa1.21□□□□□ -2.22
HERC1-211ENST00000560983 NDUFB1O75438 58 aa1.2□□□□□ -2.22
HERC1-211ENST00000560983 LEPROTL1O95214 131 aa1.2□□□□□ -2.22
HERC1-211ENST00000560983 CCKP06307 115 aa1.2□□□□□ -2.22
HERC1-211ENST00000560983 COPS9Q8WXC6 57 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 213.9 ms