RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 DNAH7Q8WXX0 4024 aa11.54□□□□□ -0.56
SEMA4B-215ENST00000560089 ALMS1Q8TCU4 4167 aa11.54□□□□□ -0.56
SEMA4B-215ENST00000560089 LINC01556Q5JQF7 62 aa11.54□□□□□ -0.56
SEMA4B-215ENST00000560089 MRPL34Q9BQ48 92 aaKnown RBP11.53□□□□□ -0.56
SEMA4B-215ENST00000560089 PLECQ15149 4684 aaKnown RBP11.52□□□□□ -0.57
SEMA4B-215ENST00000560089 ZNF861PO60384 105 aa11.51□□□□□ -0.57
SEMA4B-215ENST00000560089 ROMO1P60602 79 aa11.51□□□□□ -0.57
SEMA4B-215ENST00000560089 Q96NJ1 140 aa11.51□□□□□ -0.57
SEMA4B-215ENST00000560089 SPRR1BP22528 89 aa11.49□□□□□ -0.57
SEMA4B-215ENST00000560089 STARD9Q9P2P6 4700 aa11.48□□□□□ -0.57
SEMA4B-215ENST00000560089 CASC10Q5T4H9 136 aa11.48□□□□□ -0.57
SEMA4B-215ENST00000560089 A0A1B0GVX0 72 aa11.47□□□□□ -0.57
SEMA4B-215ENST00000560089 DNAH10Q8IVF4 4471 aa11.45□□□□□ -0.58
SEMA4B-215ENST00000560089 DMAC1Q96GE9 116 aa11.44□□□□□ -0.58
SEMA4B-215ENST00000560089 DNAH1Q9P2D7 4330 aa11.44□□□□□ -0.58
SEMA4B-215ENST00000560089 CDK2AP2O75956 126 aa11.43□□□□□ -0.58
SEMA4B-215ENST00000560089 SRRM2Q9UQ35 2752 aaKnown RBP11.42□□□□□ -0.58
SEMA4B-215ENST00000560089 Q5W150 140 aa11.41□□□□□ -0.58
SEMA4B-215ENST00000560089 DYNC2H1Q8NCM8 4307 aaKnown RBP11.4□□□□□ -0.59
SEMA4B-215ENST00000560089 DNAH10OSP0CZ25 163 aa11.39□□□□□ -0.59
SEMA4B-215ENST00000560089 KRTAP21-3Q3LHN1 58 aa11.39□□□□□ -0.59
SEMA4B-215ENST00000560089 APLNQ9ULZ1 77 aa11.39□□□□□ -0.59
SEMA4B-215ENST00000560089 NOTCH2NLQ7Z3S9 236 aa11.38□□□□□ -0.59
SEMA4B-215ENST00000560089 UBE2DNLQ8IWF7 75 aa11.38□□□□□ -0.59
SEMA4B-215ENST00000560089 KRTAP25-1Q3LHN0 102 aa11.37□□□□□ -0.59
SEMA4B-215ENST00000560089 KRTAP1-5Q9BYS1 174 aa11.36□□□□□ -0.59
SEMA4B-215ENST00000560089 KRTAP13-3Q3SY46 172 aa11.33□□□□□ -0.6
SEMA4B-215ENST00000560089 IGLV9-49A0A0B4J1Y8 123 aa11.31□□□□□ -0.6
SEMA4B-215ENST00000560089 KRTAP11-1Q8IUC1 163 aa11.31□□□□□ -0.6
SEMA4B-215ENST00000560089 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
SEMA4B-215ENST00000560089 KMT2AQ03164 3969 aa11.26□□□□□ -0.61
SEMA4B-215ENST00000560089 VPS13DQ5THJ4 4388 aa11.23□□□□□ -0.61
SEMA4B-215ENST00000560089 IGLV7-43P04211 117 aa11.22□□□□□ -0.61
SEMA4B-215ENST00000560089 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.61
SEMA4B-215ENST00000560089 P0C880 135 aa11.21□□□□□ -0.61
SEMA4B-215ENST00000560089 A8MUU9 505 aa11.17□□□□□ -0.62
SEMA4B-215ENST00000560089 A0A0A0MQY5 61 aa11.15□□□□□ -0.62
SEMA4B-215ENST00000560089 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
SEMA4B-215ENST00000560089 CHTF8P0CG12 524 aa11.15□□□□□ -0.62
SEMA4B-215ENST00000560089 DNAH2Q9P225 4427 aa11.14□□□□□ -0.63
SEMA4B-215ENST00000560089 SPINK6Q6UWN8 80 aa11.13□□□□□ -0.63
SEMA4B-215ENST00000560089 LINC00304Q8N9R0 145 aa11.13□□□□□ -0.63
SEMA4B-215ENST00000560089 LY6G6CO95867 125 aa11.11□□□□□ -0.63
SEMA4B-215ENST00000560089 WWC2-AS2Q96NR7 200 aa11.08□□□□□ -0.64
SEMA4B-215ENST00000560089 LINC00483Q53H64 154 aa11.07□□□□□ -0.64
SEMA4B-215ENST00000560089 HYDINQ4G0P3 5121 aa11.07□□□□□ -0.64
SEMA4B-215ENST00000560089 IGKV2-30P06310 120 aa11.06□□□□□ -0.64
SEMA4B-215ENST00000560089 KRTAP13-1Q8IUC0 172 aa11.05□□□□□ -0.64
SEMA4B-215ENST00000560089 FAM229AH3BQW9 127 aa11.04□□□□□ -0.64
SEMA4B-215ENST00000560089 Q6ZRN7 208 aaPredicted RBP11.03□□□□□ -0.64
SEMA4B-215ENST00000560089 CRIPTQ9P021 101 aa11.02□□□□□ -0.65
SEMA4B-215ENST00000560089 H0YAA0 97 aa10.99□□□□□ -0.65
SEMA4B-215ENST00000560089 SPINK1P00995 79 aa10.97□□□□□ -0.65
SEMA4B-215ENST00000560089 FLG2Q5D862 2391 aaPredicted RBP10.95□□□□□ -0.66
SEMA4B-215ENST00000560089 Q6ZSA8 131 aa10.94□□□□□ -0.66
SEMA4B-215ENST00000560089 HECTD4Q9Y4D8 3996 aa10.92□□□□□ -0.66
SEMA4B-215ENST00000560089 ANAPC11Q9NYG5 84 aa10.92□□□□□ -0.66
SEMA4B-215ENST00000560089 A0A087WTM6 91 aa10.9□□□□□ -0.66
SEMA4B-215ENST00000560089 SSBP3-AS1Q7Z2R9 100 aa10.9□□□□□ -0.66
SEMA4B-215ENST00000560089 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.67
SEMA4B-215ENST00000560089 C14orf177Q52M58 125 aa10.89□□□□□ -0.67
SEMA4B-215ENST00000560089 DNAH17Q9UFH2 4485 aa10.89□□□□□ -0.67
SEMA4B-215ENST00000560089 PANO1I0J062 215 aa10.88□□□□□ -0.67
SEMA4B-215ENST00000560089 SACSQ9NZJ4 4579 aa10.86□□□□□ -0.67
SEMA4B-215ENST00000560089 SPINT4Q6UDR6 99 aa10.85□□□□□ -0.67
SEMA4B-215ENST00000560089 FRAS1Q86XX4 4008 aa10.85□□□□□ -0.67
SEMA4B-215ENST00000560089 DNAH6Q9C0G6 4158 aa10.85□□□□□ -0.67
SEMA4B-215ENST00000560089 NDUFAF8A1L188 74 aa10.82□□□□□ -0.68
SEMA4B-215ENST00000560089 KRTAP16-1A8MUX0 517 aa10.8□□□□□ -0.68
SEMA4B-215ENST00000560089 PSORS1C2Q9UIG4 136 aa10.8□□□□□ -0.68
SEMA4B-215ENST00000560089 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.8□□□□□ -0.68
SEMA4B-215ENST00000560089 DNAH11Q96DT5 4516 aa10.79□□□□□ -0.68
SEMA4B-215ENST00000560089 FAT2Q9NYQ8 4349 aa10.78□□□□□ -0.68
SEMA4B-215ENST00000560089 A0A1B0GU33 70 aa10.78□□□□□ -0.68
SEMA4B-215ENST00000560089 KMT2CQ8NEZ4 4911 aaKnown RBP10.77□□□□□ -0.68
SEMA4B-215ENST00000560089 CIRBP-AS1Q8TBR5 109 aa10.77□□□□□ -0.69
SEMA4B-215ENST00000560089 C20orf166-AS1Q96NR2 134 aa10.76□□□□□ -0.69
SEMA4B-215ENST00000560089 KRTAP10-2P60368 255 aa10.76□□□□□ -0.69
SEMA4B-215ENST00000560089 DNAH5Q8TE73 4624 aa10.75□□□□□ -0.69
SEMA4B-215ENST00000560089 K7ERS5 55 aa10.74□□□□□ -0.69
SEMA4B-215ENST00000560089 DNAH8Q96JB1 4490 aa10.73□□□□□ -0.69
SEMA4B-215ENST00000560089 PKD1P98161 4303 aa10.72□□□□□ -0.69
SEMA4B-215ENST00000560089 TYMSOSQ8TAI1 123 aa10.72□□□□□ -0.69
SEMA4B-215ENST00000560089 Q8N1X5 172 aa10.72□□□□□ -0.69
SEMA4B-215ENST00000560089 H1FX-AS1Q4G0G2 97 aa10.68□□□□□ -0.7
SEMA4B-215ENST00000560089 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
SEMA4B-215ENST00000560089 PKHD1P08F94 4074 aa10.67□□□□□ -0.7
SEMA4B-215ENST00000560089 RYR2Q92736 4967 aa10.62□□□□□ -0.71
SEMA4B-215ENST00000560089 KRTAP15-1Q3LI76 137 aa10.6□□□□□ -0.71
SEMA4B-215ENST00000560089 KRTAP10-1P60331 282 aa10.58□□□□□ -0.72
SEMA4B-215ENST00000560089 LRP1BQ9NZR2 4599 aa10.55□□□□□ -0.72
SEMA4B-215ENST00000560089 TPRXLQ17RH7 258 aa10.54□□□□□ -0.72
SEMA4B-215ENST00000560089 RYR3Q15413 4870 aa10.52□□□□□ -0.73
SEMA4B-215ENST00000560089 DYNC1H1Q14204 4646 aaKnown RBP10.46□□□□□ -0.73
SEMA4B-215ENST00000560089 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
SEMA4B-215ENST00000560089 C10orf95Q9H7T3 257 aa10.41□□□□□ -0.74
SEMA4B-215ENST00000560089 VPS13BQ7Z7G8 4022 aa10.38□□□□□ -0.75
SEMA4B-215ENST00000560089 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
SEMA4B-215ENST00000560089 SMR3BP02814 79 aaPredicted RBP10.34□□□□□ -0.75
SEMA4B-215ENST00000560089 FAT1Q14517 4588 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms